Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
no-inputs-wf.cwl
Workflow without inputs. |
https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/no-inputs-wf.cwl Branch/Commit ID: e62f99dd79d6cb9c157cceb458f74200da84f6e9 |
|
|
|
scatter-valuefrom-wf6.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf6.cwl Branch/Commit ID: b82ce7ae901a54c7a062fd5eefd8d5ceb5a4d684 |
|
|
|
WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl Branch/Commit ID: f906212e2c9a88280ae36545e5422f25752aa8f4 |
|
|
|
cache_asnb_entries
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_cache_asnb_entries.cwl Branch/Commit ID: 0bc1c33a2293e054ad00974971edc79c13252cc7 |
|
|
|
count-lines8-wf.cwl
|
https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines8-wf.cwl Branch/Commit ID: 4fd45edb9531a03223c18a586e32d0baf0d5acb2 |
|
|
|
Unaligned bam to sorted, markduped bam
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: f42c889734c8f709ad2fd9090493bcaac8326c98 |
|
|
|
kmer_cache_store
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_store.cwl Branch/Commit ID: 55b6ee46b0c9fb1c9949cd0888b388c6f11b73b1 |
|
|
|
step-valuefrom5-wf.cwl
|
https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/step-valuefrom5-wf.cwl Branch/Commit ID: 664835e83eb5e57eee18a04ce7b05fb9d70d77b7 |
|
|
|
checkm
|
https://github.com/ncbi/pgap.git
Path: checkm/wf_checkm.cwl Branch/Commit ID: 8af4e2aabf43d5e3c7162efae4ad4649df5601e2 |
|
|
|
bwa_index
Modified from https://github.com/kids-first/kf-somatic-workflow/blob/master/sub_workflows/prepare_reference.cwl |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/bwa_index.cwl Branch/Commit ID: 6ccec9c5c5bc9fb4e75ca0b9cc22d13df9ffb815 |
