Explore Workflows

https://github.com/ncbi-hackathons/contamfilter.git

Path: cwl/workflow/contam_euk.cwl

Branch/Commit ID: master

https://github.com/bcbio/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-arvados/wf-variantcall.cwl

Branch/Commit ID: master

https://github.com/duke-gcb/bespin-cwl.git

Path: packed/qiime2-step1-import-demux-paired.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: qiime2-02-demux-emp-paired.cwl

The BD Rhapsody™ WTA Analysis Pipeline is used to create sequencing libraries from single cell transcriptomes without having to specify a targeted panel. After sequencing, the analysis pipeline takes the FASTQ files, a reference genome file and a transcriptome annotation file for gene alignment. The pipeline generates molecular counts per cell, read counts per cell, metrics, and an alignment file.

https://github.com/GeorgeAlehandro/cwl_1_11.git

Path: workflow1_11.cwl

Branch/Commit ID: main

Packed ID: main

create textures and pack them to be a stellaris mod

https://gitlab.com/unduthegun/stellaris-emblem-lab.git

Path: pack/pack.cwl

Branch/Commit ID: cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.woBQSR.multisamples.cwl

Branch/Commit ID: master

https://github.com/NCATS-Tangerine/ros.git

Path: ros/wf5/wf52.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/schemadef_types_with_import-wf.cwl

Branch/Commit ID: main

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: 536d6ed

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/scatter-wf4.cwl

Branch/Commit ID: master

Packed ID: main