Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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collate_unique_SSU_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 1b0851e |
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checkm
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https://github.com/ncbi/pgap.git
Path: checkm/wf_checkm.cwl Branch/Commit ID: test |
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lowercase-directory.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/lowercase-directory.cwl Branch/Commit ID: master |
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workflow-ebisearch.cwl
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https://github.com/ebi-jdispatcher/webservice-cwl.git
Path: workflows/workflow-ebisearch.cwl Branch/Commit ID: master |
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Transcripts annotation workflow
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https://github.com/EBI-Metagenomics/workflow-is-cwl.git
Path: workflows/TranscriptsAnnotation-i5only-wf.cwl Branch/Commit ID: master |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: master |
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Find reads with predicted coding sequences above 60 AA in length
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/orf_prediction.cwl Branch/Commit ID: f914942 |
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Optical throughput measurements via muon ring analysis
Upon receiving a new DL0 data product (from either Monte Carlo simulations or observations), DPPS triggers the CalibPipe (ctapipe-process) to process the data using ctapipe, extracting the signal charges and reconstructing muon parameters. The second step involves using the CalibPipe tool to estimate the telescope’s optical throughput using a predefined number of muon events. |
https://github.com/burmist-git/076_cwl.git
Path: uc-120-2.2-optical-throughput-calibration-with-muons.cwl Branch/Commit ID: master |
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exomeseq-gatk4-01-preprocessing.cwl
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https://github.com/bespin-workflows/exomeseq-gatk4.git
Path: subworkflows/exomeseq-gatk4-01-preprocessing.cwl Branch/Commit ID: v2.0.3 |
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indexing_bed
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https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/indexing_bed.cwl Branch/Commit ID: 1.0.7 |
