Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph exomeseq-02-variantdiscovery.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: subworkflows/exomeseq-02-variantdiscovery.cwl

Branch/Commit ID: gatk4-fixes
workflow graph 01-qc-se.cwl

ATAC-seq 01 QC - reads: SE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/01-qc-se.cwl

Branch/Commit ID: v1.0.0
workflow graph basic-text-statistics-pattern-dir.cwl

https://github.com/WhatWorksWhenForWhom/nlppln.git

Path: nlppln/cwl/basic-text-statistics-pattern-dir.cwl

Branch/Commit ID: master
workflow graph wf_get_tree_ring_values.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw_cwl_parser_old/Examples/get_tree_ring_values/wf_get_tree_ring_values.cwl

Branch/Commit ID: master
workflow graph scRNA-seq pipeline using Salmon and Alevin

https://github.com/hubmapconsortium/salmon-rnaseq.git

Path: pipeline.cwl

Branch/Commit ID: c502823
workflow graph topmed-alignment-checker.cwl

https://github.com/stain/topmed-workflows.git

Path: aligner/sbg-alignment-cwl/topmed-alignment-checker.cwl

Branch/Commit ID: namespaces
workflow graph fillout_pre_processing.cwl

https://github.com/mskcc/pluto-cwl.git

Path: cwl/fillout_pre_processing.cwl

Branch/Commit ID: master
workflow graph oxog_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/david4096/oxog-dockstore-tools.git

Path: oxog_sub_wf.cwl

Branch/Commit ID: develop
workflow graph snaptools_create_snap_file.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/snaptools_create_snap_file.cwl

Branch/Commit ID: v1.0
workflow graph wf_blastit.cwl

https://github.com/ncbi/pipelines.git

Path: contam_filter/wf_blastit.cwl

Branch/Commit ID: master