Explore Workflows
View already parsed workflows here or click here to add your own
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qiime2 demux sequences
Demultiplexing sequences from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
Path: subworkflows/qiime2-02-demux-emp-single.cwl Branch/Commit ID: develop |
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BAT_workflow.cwl
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Path: CWL/workflows/BAT/BAT_workflow.cwl Branch/Commit ID: main |
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ChIP-seq peak caller workflow MACS2 based
This workflow execute peak caller and QC for ChIP-seq using MACS2 |
Path: workflows/ChIP-Seq/peak-calling-MACS2-genome-size.cwl Branch/Commit ID: master |
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fastqPE2bam.multisamples.cwl
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Path: Workflows/fastqPE2bam.multisamples.cwl Branch/Commit ID: master |
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Data2Services CWL workflow to convert CSV/TSV files with statements split, Vincent Emonet <vincent.emonet@gmail.com>
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Path: support/aynec-fb13-a/virtuoso-workflow/workflow.cwl Branch/Commit ID: master |
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step5: The process of updating the GFF format file from identifying TSS (transcription start sites) from CAGE-seq data
\" The process of updating the GFF format file from identifying TSS - transcription start sites - from paired-end CAGE-seq data. This workflow consists of the following files: (1) Tools/06_combined_exec_TSSr.cwl, (2) Tools/07_join_all_assignedClusters.cwl, (3) Tools/08_uniq_tss_feature.cwl, (4) Tools/09_update_gtf.cwl \" |
Path: workflow/04_tssr_subworkflow_pe.cwl Branch/Commit ID: main |
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composed_workflows.cwl
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Path: tests/cwl/composed_workflows.cwl Branch/Commit ID: master |
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hi-c-processing-bam.cwl
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Path: cwl/hi-c-processing-bam.cwl Branch/Commit ID: master |
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wf_demultiplex_se.cwl
This workflow takes in single-end reads, and performs the following steps in order: demux_se.cwl (does not actually demux for single end, but mirrors the paired-end processing protocol) |
Path: cwl/wf_demultiplex_se.cwl Branch/Commit ID: master |
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SSU-from-tablehits.cwl
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Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: fa86fce |
