Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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SSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: c1f8b22 |
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Water bodies detection based on NDWI and otsu threshold
Water bodies detection based on NDWI and otsu threshold |
https://github.com/fabricebrito/fgb.git
Path: wrapped.cwl Branch/Commit ID: main Packed ID: water_bodies |
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bwa_mem
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https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/bwa_mem.cwl Branch/Commit ID: master |
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Pairwise genomic regions intersection
Pairwise genomic regions intersection ============================================= Overlaps peaks from two ChIP/ATAC experiments |
https://github.com/datirium/workflows.git
Path: workflows/peak-intersect.cwl Branch/Commit ID: master |
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preprocess_vcf.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git
Path: preprocess_vcf.cwl Branch/Commit ID: master |
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step2: trimming fastq files (paired-end)
multiple fastq files trimming process using fastp version 0.23.4 and scatter feature requirement |
https://github.com/RyoNozu/CWL4IncorporateTSSintoGXF.git
Path: workflow/01_trimming_fastq_subworkflow_pe.cwl Branch/Commit ID: main |
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rRNA_selection.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 5833078 |
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umccrise-pipeline__2.3.0--0.cwl
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https://github.com/umccr/cwl-ica.git
Path: workflows/umccrise-pipeline/2.3.0--0/umccrise-pipeline__2.3.0--0.cwl Branch/Commit ID: main |
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scatter-wf2_v1_2.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/scatter-wf2_v1_2.cwl Branch/Commit ID: main |
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repliseq-parta.cwl
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https://github.com/4dn-dcic/pipelines-cwl.git
Path: cwl_awsem_v1/repliseq/repliseq-parta.cwl Branch/Commit ID: dev2 |
