Explore Workflows

ATAC-seq 02 trimming - reads: PE

https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/02-trim-pe.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-valuefrom-wf5.cwl

Branch/Commit ID: main

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/david4096/OxoG-Dockstore-Tools.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: develop

https://github.com/smc-rna-challenge/beccyl-7238196.git

Path: main.cwl

Branch/Commit ID: master

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/abstract_operations/subworkflows/samtools_view_sam2bam.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines13-wf.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 5dc7c5c

https://github.com/puentesdiaz/workflows.git

Path: workflows/kallisto-demo.cwl

Branch/Commit ID: master

https://github.com/nci-gdc/htseq-cwl.git

Path: workflows/subworkflows/upload_results_workflow.cwl

Branch/Commit ID: master

https://github.com/hubmapconsortium/sprm.git

Path: pipeline.cwl

Branch/Commit ID: b129402