Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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count-lines8-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines8-wf-noET.cwl Branch/Commit ID: main |
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mutect parallel workflow
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https://github.com/ChrisMaherLab/PACT.git
Path: subworkflows/mutect.cwl Branch/Commit ID: master |
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FASTQ Vector Removal
This workflow clean up vectros from fastq files |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Contamination/fastq-vector-removal.cwl Branch/Commit ID: master |
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Vcf concordance evaluation workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_eval_concordance.cwl Branch/Commit ID: master |
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collate_unique_SSU_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: d3b8e45 |
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ACCESS_pipeline.cwl
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https://github.com/mskcc/ACCESS-Pipeline.git
Path: workflows/ACCESS_pipeline.cwl Branch/Commit ID: master |
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exomeseq-03-organizedirectories.cwl
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https://github.com/duke-gcb/bespin-cwl.git
Path: subworkflows/exomeseq-03-organizedirectories.cwl Branch/Commit ID: gatk4-fixes |
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TAP 0.9
todo |
https://github.com/MG-RAST/amplicon.git
Path: CWL/Workflows/relabel-and-merge.cwl Branch/Commit ID: wilke/20180622 |
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collate_unique_SSU_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 3168316 |
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wf_clipseqcore_pe_2barcodes.cwl
Workflow for handling reads containing two barcodes. Returns the bam file containing read2 only. Notes: runs the following steps: - demultiplex - trimfirst_file2string - trimagain_file2string - b1_trim_and_map - view_r2 - index_r2_bam - make_bigwigs |
https://github.com/YeoLab/eclip.git
Path: cwl/wf_clipseqcore_pe_2barcodes.cwl Branch/Commit ID: master |
