Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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snaptools_create_snap_file.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/snaptools_create_snap_file.cwl Branch/Commit ID: 302f1f3 |
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02-peakcall.cwl
DNase-seq 02 quantification |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/DNase-seq_pipeline/02-peakcall.cwl Branch/Commit ID: master |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/wgs-noscreen-fastq.workflow.cwl Branch/Commit ID: master |
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env-wf1.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/env-wf1.cwl Branch/Commit ID: master |
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CRAM_md5sum_checker_wrapper.cwl
This wraps the md5sum tool with a checker workflow that runs both the tool and a tool that performs verification of results |
https://github.com/DataBiosphere/toolbox.git
Path: CRAM-no-header-md5sum/CRAM_md5sum_checker_wrapper.cwl Branch/Commit ID: 1.30.0 |
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birds.cwl
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https://github.com/EOSC-LOFAR/presto-cwl.git
Path: birds.cwl Branch/Commit ID: visualise |
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Find reads with predicted coding sequences above 60 AA in length
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https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: workflows/orf_prediction.cwl Branch/Commit ID: master |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: 71d9c83 |
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wf_C3_C4_map_present_NA_MOD.cwl
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https://github.com/idaks/cwl_modeling.git
Path: yw_cwl_modeling/yw2cwl_parser/example_sql/C3_C4_map_present_NA_MOD/wf_C3_C4_map_present_NA_MOD.cwl Branch/Commit ID: master |
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hi-c-processing-pairs-nonorm.cwl
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https://github.com/mr-c/4dn-dcic-pipelines-cwl.git
Path: cwl_awsem_v1/hi-c-processing-pairs-nonorm.cwl Branch/Commit ID: dev2 |
