Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	multiple_input_feature_requirement.cwl	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/multiple_input_feature_requirement.cwl Branch/Commit ID: c7c97715b400ff2194aa29fc211d3401cea3a9bf
	heatmap.cwl Generates ATDP heatmap centered on TSS from an array of input BAM files and genelist TSV file. Returns array of heatmap JSON files with the names that have the same basenames as input BAM files, but with .json extension	https://github.com/Barski-lab/workflows.git Path: workflows/heatmap.cwl Branch/Commit ID: ea2a2ab57710fcf067f67305f3dd6ad29094da1a
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: a7838a5ca72b25db5c2af20a15f34303a839980e
	count-lines1-wf-noET.cwl	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/count-lines1-wf-noET.cwl Branch/Commit ID: ea9f8634e41824ac3f81c3dde698d5f0eef54f1b
	contig LCA create LCA consistant across input contigs contigs order of precedence - rRNA, single copy gene, LCA of genes	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/contig-lca.workflow.cwl Branch/Commit ID: 1844de830f6935901849ccd9966685fbf13e8042
	Pairwise genomic regions intersection Pairwise genomic regions intersection ============================================= Overlaps peaks from two ChIP/ATAC experiments	https://github.com/datirium/workflows.git Path: workflows/peak-intersect.cwl Branch/Commit ID: 7ced5a5259dbd8b3fc64456beaeffd44f4a24081
	basename-fields-test.cwl	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/basename-fields-test.cwl Branch/Commit ID: 57baec040c99d7edef8242ef51b5470b1c82d733
	Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: 3ee63d8757c341ca98b3b46ec4782862ad19b710
	rnaseq-se-dutp.cwl Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/rnaseq-se-dutp.cwl Branch/Commit ID: ea2a2ab57710fcf067f67305f3dd6ad29094da1a
	wgs alignment and tumor-only variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/wgs.cwl Branch/Commit ID: f9600f9959acdc30259ba7e64de61104c9b01f0b