Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Nested workflow example
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/nested.cwl Branch/Commit ID: 8949fc2d68efe128ce841739d1190645dbd233bb |
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exome alignment and germline variant detection, with optitype for HLA typing
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: 049f4aeff4c4a1b8421cac9b1c1c1f0da5848315 |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2 |
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md5sum-workflow.cwl
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https://github.com/fhembroff/md5sum-checker.git
Path: md5sum/md5sum-workflow.cwl Branch/Commit ID: master |
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kfdrc_bwamem_subwf.cwl
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https://github.com/kids-first/kf-alignment-workflow.git
Path: workflows/dev/ultra-opt/workflows/kfdrc_bwamem_subwf.cwl Branch/Commit ID: 43d7b79b07b8948c879b9bf97aeec461c79492d2 |
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count-lines15-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines15-wf.cwl Branch/Commit ID: 1f3ef888d9ef2306c828065c460c1800604f0de4 |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2 |
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gp_makeblastdb
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https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: dd53e6d71282b0619ef7123ba2d258b30aef2dd0 |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 767e3dc7448da5bc44e4817c4161f6e4530032e2 |
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raw-reads-1.cwl
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https://github.com/EBI-Metagenomics/pipeline-v5.git
Path: workflows/conditionals/raw-reads/raw-reads-1.cwl Branch/Commit ID: fff6fa392370b56e1fe7c374167ba73df3018775 |
