Explore Workflows

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 3168316

This workflow step takes the PeptideProphet output files from the first step containing the peptide validation and calculates the protein inference using ProteinProphet.

https://github.com/cwl-apps/fragpipe-proteomics-pipeline-tutorial.git

Path: FragPipe-ProteinProphet/fragpipe-proteinprophet.cwl

Branch/Commit ID: main

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git

Path: minibam_sub_wf.cwl

Branch/Commit ID: 1.0.0

https://github.com/hacchy1983/imputation-server-jp.git

Path: Workflows/beagle-imputation-scatter-region.cwl

Branch/Commit ID: main

https://github.com/mr-c/4dn-dcic-pipelines-cwl.git

Path: cwl_awsem_v1/hi-c-processing-pairs-nore-nonorm.cwl

Branch/Commit ID: master

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: ST520110.cwl

Branch/Commit ID: main

Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored.

https://github.com/Barski-lab/workflows.git

Path: tools/group-isoforms-batch.cwl

Branch/Commit ID: master

https://github.com/ska-sa/den.git

Path: cwl/main.cwl

Branch/Commit ID: master

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: tools/LSU-from-tablehits.cwl

Branch/Commit ID: master

https://github.com/mr-c/workflow-is-cwl.git

Path: workflows/TranscriptsAnnotation-wf.cwl

Branch/Commit ID: fix_sbg_namespace