Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Create target and anti-target files for CNA analysis
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https://github.com/ChrisMaherLab/PACT.git
Path: subworkflows/cnvkit_prep_regions.cwl Branch/Commit ID: master |
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amplicon_preprocess_workflow.cwl
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https://github.com/kmooog/amplicon-pipeline.git
Path: script/1-preproccess/amplicon_preprocess_workflow.cwl Branch/Commit ID: master |
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blast2tree_v2.cwl
blastp, awk, blastdbcmd, clustalo, and fasttreeの5つのステップを実行 |
https://github.com/yonesora56/togotv_cwl_for_remote_container.git
Path: zatsu_cwl_bioinformatics/blast2tree_v2.cwl Branch/Commit ID: master |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: master |
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rhapsody_wta_1.8.cwl#SplitAndSubsample.cwl
SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter. |
https://github.com/longbow0/cwl.git
Path: v1.8/rhapsody_wta_1.8.cwl Branch/Commit ID: master Packed ID: SplitAndSubsample.cwl |
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rhapsody_wta_1.8.cwl#UncompressDatatables.cwl
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https://github.com/longbow0/cwl.git
Path: v1.8/rhapsody_wta_1.8.cwl Branch/Commit ID: master Packed ID: UncompressDatatables.cwl |
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rhapsody_targeted_1.8.cwl#SplitAndSubsample.cwl
SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter. |
https://github.com/longbow0/cwl.git
Path: v1.8/rhapsody_targeted_1.8.cwl Branch/Commit ID: master Packed ID: SplitAndSubsample.cwl |
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STAR-Alignment-PE-circRNA
This workflow aligns the fastq files using STAR for paired-end samples to be used in circRNA pipeline |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Alignments/star-alignment-circRNA-default.cwl Branch/Commit ID: master |
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js-expr-req-wf.cwl#wf
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/js-expr-req-wf.cwl Branch/Commit ID: main Packed ID: wf |
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ST520107.cwl
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https://github.com/Marco-Salvi/cwl-test.git
Path: wf5201/ST520107.cwl Branch/Commit ID: main |
