Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Bacterial Annotation, ab initio (first pass) searched against AntiFam
|
https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_ab_initio_antifam.cwl Branch/Commit ID: test |
|
|
|
tRNA_selection.cwl
|
https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 71d9c83 |
|
|
|
zip_and_index_vcf.cwl
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output. |
https://github.com/icgc-tcga-pancancer/pcawg-snv-indel-annotation.git
Path: zip_and_index_vcf.cwl Branch/Commit ID: develop |
|
|
|
cmsearch-multimodel.cwl
|
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/cmsearch-multimodel.cwl Branch/Commit ID: 930a2cf |
|
|
|
qiime2 DADA2 detect/correct sequence data
Option 1: DADA2 from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-03-dada2.cwl |
|
|
|
count-lines11-wf.cwl
|
https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/count-lines11-wf.cwl Branch/Commit ID: master |
|
|
|
exomeseq-00-prepare-reference-data.cwl
|
https://github.com/Duke-GCB/bespin-cwl.git
Path: subworkflows/exomeseq-00-prepare-reference-data.cwl Branch/Commit ID: gatk4-fixes |
|
|
|
workflow.cwl
|
https://github.com/reanahub/reana-demo-root6-roofit.git
Path: workflow/cwl/workflow.cwl Branch/Commit ID: master |
|
|
|
full_workflow_notcompact.cwl
|
https://github.com/teoloup/cwltools.git
Path: full_workflow_notcompact.cwl Branch/Commit ID: master |
|
|
|
Functional analyis of sequences that match the 16S SSU
|
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: 2104dc3 |
