Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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count-lines7-wf_v1_2.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/count-lines7-wf_v1_2.cwl Branch/Commit ID: f14ff6a51d14430b4d02ee1d352a19644d231113 |
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bgzip and index VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: a28a8077a8c4dbf117d16799807483a2532af3f3 |
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mut3.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut3.cwl Branch/Commit ID: 0b3846fbf866584870a0b1ce902b5574f549dfee |
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Run genomic CMsearch (Rfam rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 89839cdb0a3216024f5f97af5581ae9753de0496 |
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Execute CRISPR
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https://github.com/ncbi/pgap.git
Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 89839cdb0a3216024f5f97af5581ae9753de0496 |
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Run tRNAScan
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 89839cdb0a3216024f5f97af5581ae9753de0496 |
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Align reference proteins plane complete workflow, with miniprot
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https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_protein_alignment_miniprot.cwl Branch/Commit ID: 89839cdb0a3216024f5f97af5581ae9753de0496 |
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checkm
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https://github.com/ncbi/pgap.git
Path: checkm/wf_checkm.cwl Branch/Commit ID: 89839cdb0a3216024f5f97af5581ae9753de0496 |
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Bacterial Annotation, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_2nd_pass.cwl Branch/Commit ID: 89839cdb0a3216024f5f97af5581ae9753de0496 |
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Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_ab_initio_training.cwl Branch/Commit ID: 89839cdb0a3216024f5f97af5581ae9753de0496 |
