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Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl
Branch/Commit ID: master
Path: definitions/subworkflows/strelka_and_post_processing.cwl
Path: definitions/subworkflows/mutect.cwl
Path: ochre/cwl/align-texts-wf.cwl
Path: birds.cwl
Path: definitions/pipelines/detect_variants_wgs_nonhuman.cwl
Path: definitions/pipelines/tumor_only_exome.cwl
Path: definitions/subworkflows/cram_to_bam_and_index.cwl
Branch/Commit ID: low-vaf
Path: definitions/subworkflows/pindel.cwl
Path: varscan/bgzip_and_index.cwl
Branch/Commit ID: toil_compatibility