Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph umi duplex alignment fastq workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/umi_duplex_alignment.cwl

Branch/Commit ID: e649fcb1092905c539be026a3f23c82d5b0871d2
workflow graph Running cellranger count and lineage inference

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_cell_rnaseq.cwl

Branch/Commit ID: a28a8077a8c4dbf117d16799807483a2532af3f3
workflow graph 1st-workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/1st-workflow.cwl

Branch/Commit ID: 9cda157cb4380e9d30dec29f0452c56d0c10d064
workflow graph count-lines7-single-source-wf_v1_1.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/count-lines7-single-source-wf_v1_1.cwl

Branch/Commit ID: ebd041f35a1179668e9a7490249d651a6cc034b7
workflow graph workflow_input_format_expr_v1_1.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/workflow_input_format_expr_v1_1.cwl

Branch/Commit ID: f14ff6a51d14430b4d02ee1d352a19644d231113
workflow graph amplitude.cwl

https://git.astron.nl/RD/LINC.git

Path: workflows/linc_target/amplitude.cwl

Branch/Commit ID: 322fbb6db100df49881edd4d1db4e9a8e7e3715b
workflow graph format_rrnas_from_seq_entry

https://github.com/ncbi/pgap.git

Path: task_types/tt_format_rrnas_from_seq_entry.cwl

Branch/Commit ID: 3e7a3c1cc1ed5164ae0a51a96f20d7c480d1d70b
workflow graph Vcf concordance evaluation workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/vcf_eval_concordance.cwl

Branch/Commit ID: a28a8077a8c4dbf117d16799807483a2532af3f3
workflow graph step-valuefrom3-wf_v1_0.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step-valuefrom3-wf_v1_0.cwl

Branch/Commit ID: f14ff6a51d14430b4d02ee1d352a19644d231113
workflow graph magicblast-alignment-pe

This workflow aligns the fastq files using magicblast for paired-end samples

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Alignments/magicblast-alignment.cwl

Branch/Commit ID: f9447c1ac522e17531097c93a169a1a31453e874