Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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wf_simulate_data_collection.cwl
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https://github.com/idaks/cwl_modeling.git
Path: yw_cwl_modeling/yw2cwl_parser/example_sql/simulate_data_collection/wf_simulate_data_collection.cwl Branch/Commit ID: master |
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module-6
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/module-6.cwl Branch/Commit ID: 2.4.x |
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scatter-valuefrom-wf4.cwl#main
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/scatter-valuefrom-wf4.cwl Branch/Commit ID: master Packed ID: main |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: cee6caf |
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Apply filters to VCF file
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https://github.com/litd/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: master |
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qiime2 Deblur detect/correct sequence data
Option 2: Deblur from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-deblur.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-03-deblur.cwl |
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trimming-and-qc-no-upload.cwl
Use fastq file as input and do trimming and quality check. Quality checks are done before trimming and after trimming. |
https://github.com/ddbj/SAPPORO_test_workflow.git
Path: workflow/trimming-and-qc/trimming-and-qc-no-upload/trimming-and-qc-no-upload.cwl Branch/Commit ID: master |
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WGS QC workflow
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: No_filters_detect_variants |
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wf3.cwl
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https://github.com/RenskeW/cwlprov-provenance.git
Path: sl_prov_question/scenario3/wf3.cwl Branch/Commit ID: main |
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qiime2 explore sample taxonomic composition
Taxonomic analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step2-dada2.cwl Branch/Commit ID: qiime2-workflow Packed ID: qiime2-08-taxonomic-analysis.cwl |
