Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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merge-bam-parallel
This workflow merge BAM files per condition in parallel |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/File-formats/merge-bam-parallel.cwl Branch/Commit ID: master |
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chksum_for_a_corrupted_fastq_file.cwl
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https://github.com/cancerit/workflow-seq-import.git
Path: cwls/chksum_for_a_corrupted_fastq_file.cwl Branch/Commit ID: master |
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Calculate FDA-requested metrics on all aligned and unaligned sequence files
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/generate_fda_metrics.cwl Branch/Commit ID: master |
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maw_single.cwl
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https://github.com/zmahnoor14/MAW.git
Path: cwl/maw_single.cwl Branch/Commit ID: main |
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protein annotation
Proteins - predict, filter, cluster, identify, annotate |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/protein-filter-annotation.workflow.cwl Branch/Commit ID: master |
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trimmed_fastq
Quality Control (raw data), Raw Data trimming and Quality Control (pre-processed) |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/abstract_operations/subworkflows/trimmed_fastq.cwl Branch/Commit ID: master |
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LBA_calibrator.cwl
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https://git.astron.nl/eosc/prefactor3-cwl.git
Path: workflows/LBA_calibrator.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 0cf06f1 |
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annotator_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/svonworl/OxoG-Dockstore-Tools.git
Path: annotator_sub_wf.cwl Branch/Commit ID: develop |
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preprocess-ont.cwl
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https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git
Path: PreProcessing/preprocess-ont.cwl Branch/Commit ID: preprocessing |
