Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph snp_callers_workflow.cwl

A workflow for running MuSe, MuTect, SomaticSniper, and Pindel. See [the github repository](https://github.com/BD2KGenomics/dockstore_workflow_snps) for details.

https://github.com/BD2KGenomics/dockstore_workflow_snps.git

Path: snp_callers_workflow.cwl

Branch/Commit ID: master
workflow graph annotator_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/icgc-tcga-pancancer/pcawg-snv-indel-annotation.git

Path: annotator_sub_wf.cwl

Branch/Commit ID: 1.0.0
workflow graph preprocess.cwl

https://github.com/ncbi-hackathons/epigenomics_cwl.git

Path: cwl/tools/preprocess.cwl

Branch/Commit ID: master
workflow graph testTimeSIMLR.cwl

https://github.com/Gepiro/rCASCStreamFlow.git

Path: setting/testTimeSIMLR.cwl

Branch/Commit ID: main
workflow graph count-lines11-extra-step-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines11-extra-step-wf.cwl

Branch/Commit ID: main
workflow graph pileups_workflow.cwl

https://github.com/ReddyLab/bird-workflow.git

Path: 01_mpileups/pileups_workflow.cwl

Branch/Commit ID: main
workflow graph maw_single.cwl

https://github.com/zmahnoor14/MAW.git

Path: cwl/maw_single.cwl

Branch/Commit ID: main
workflow graph pack.cwl

create textures and pack them to be a stellaris mod

 https://gitlab.com/unduthegun/stellaris-emblem-lab.git

Path: pack/pack.cwl

Branch/Commit ID: master
workflow graph harmonization_bwa_mem.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/harmonization_bwa_mem.cwl

Branch/Commit ID: master
workflow graph running cellranger mkfastq and count

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl

Branch/Commit ID: master