Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and germline variant detection, with optitype for HLA typing	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00
	scatter2.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/scatter2.cwl Branch/Commit ID: efd59864c24d97e6d0d1d273025d3ef9003fa44d
	step-valuefrom2-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/step-valuefrom2-wf.cwl Branch/Commit ID: beab66d649dd3ee82a013322a5e830875e8556ba
	ani_top_n	https://github.com/ncbi/pgap.git Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: 16d1198871195e2229fd44dd0ad94a4ed6a87caf
	trim-rnaseq-se.cwl Runs RNA-Seq BioWardrobe basic analysis with single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-se.cwl Branch/Commit ID: bc75349ad3a7bdce82b4cd8584501f4d0280bb8d
	tt_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 2d851682ba1bf2aaaacb3677253b55ceb59c8568
	gcaccess_from_list	https://github.com/ncbi/pgap.git Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: 89098668413e90519c99b35143bffec509d3599c
	count-lines5-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/count-lines5-wf.cwl Branch/Commit ID: 86c46cb397de029e4c91f02cca40fa2b54d22f37
	super-enhancer.cwl Both `islands_file` and `islands_control_file` should be produced by the same cwl tool (iaintersect.cwl or macs2-callpeak-biowardrobe-only.cwl)	https://github.com/datirium/workflows.git Path: workflows/super-enhancer.cwl Branch/Commit ID: cb5e5b8563be4977e9f2babc14fe084faa234847
	cond-wf-003.1.cwl	https://github.com/common-workflow-language/cwl-utils.git Path: testdata/cond-wf-003.1.cwl Branch/Commit ID: 124a08ce3389eb49066c34a4163cbbed210a0355