Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	scatter-wf3.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf3.cwl Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83 Packed ID: main
	star-index.cwl Generates indices for STAR v2.5.3a (03/17/2017).	https://github.com/datirium/workflows.git Path: workflows/star-index.cwl Branch/Commit ID: cb5e5b8563be4977e9f2babc14fe084faa234847
	tt_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 0d9e6bb52eac0c209af3977aa779e39aaa432458
	fastqSE2bam.cwl	https://github.com/ddbj/human-reseq.git Path: Workflows/fastqSE2bam.cwl Branch/Commit ID: 9064c301d858a796f8340d1e762e5916fd199da0
	ChIP-Seq pipeline single-read ChIP-Seq basic analysis workflow for a single-read experiment.	https://github.com/datirium/workflows.git Path: workflows/chipseq-se.cwl Branch/Commit ID: cb5e5b8563be4977e9f2babc14fe084faa234847
	1st-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/1st-workflow.cwl Branch/Commit ID: e2ec740fccc81ff7071dcd607c5c158fbc0dfb90
	count-lines9-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines9-wf.cwl Branch/Commit ID: 8010fd2bf1e7090ba6df6ca8c84bbb96e2272d32
	Super-enhancer post ChIP-Seq analysis Super-enhancers, consist of clusters of enhancers that are densely occupied by the master regulators and Mediator. Super-enhancers differ from typical enhancers in size, transcription factor density and content, ability to activate transcription, and sensitivity to perturbation. Use to create stitched enhancers, and to separate super-enhancers from typical enhancers using sequencing data (.bam) given a file of previously identified constituent enhancers (.gff)	https://github.com/datirium/workflows.git Path: workflows/super-enhancer.cwl Branch/Commit ID: c5bae2ca862c764911b83d1f15ff6af4e2a0db28
	Chipseq alignment with qc and creating homer tag directory	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/chipseq_alignment.cwl Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00
	chipseq-pe.cwl Runs ChIP-Seq BioWardrobe basic analysis with paired-end input data files.	https://github.com/Barski-lab/workflows.git Path: workflows/chipseq-pe.cwl Branch/Commit ID: dc4ee45ed2c5c30e9a1a173c9ea4445f27d3788a