Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: 9225fa2 |
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env-wf3.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/env-wf3.cwl Branch/Commit ID: main |
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wf_clipseqcore_se_1barcode.cwl
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https://github.com/YeoLab/eclip.git
Path: cwl/wf_clipseqcore_se_1barcode.cwl Branch/Commit ID: master |
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rRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/rRNA_selection.cwl Branch/Commit ID: 8e196ab |
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gatk-4.0.0.0-joint-calling.cwl
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https://github.com/wtsi-hgi/arvados-pipelines.git
Path: cwl/workflows/gatk-4.0.0.0-joint-calling.cwl Branch/Commit ID: master |
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createindex_singlevirus.cwl
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https://github.com/yyoshiaki/VIRTUS.git
Path: workflow/createindex_singlevirus.cwl Branch/Commit ID: master |
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FragPipe: TMT Integrator and QC
This workflow step executes TMT-Integrator using the report tables generated by Philosopher. The program applies a series of statistical filters, and high-quality thresholds to filter the data. Summary report tables are created containing peptides, proteins, genes, and phosphosites (only for phospho-enriched data sets). |
https://github.com/cwl-apps/fragpipe-proteomics-pipeline-tutorial.git
Path: FragPipe-TMT-Integrator-and-QC/fragpipe-tmt-integrator-and-qc.cwl Branch/Commit ID: main |
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SSU-from-tablehits.cwl
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https://github.com/FarahZKhan/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: master |
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module-1.cwl
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https://github.com/mskcc/Innovation-Pipeline.git
Path: workflows/module-1.cwl Branch/Commit ID: master |
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scatter-wf3.cwl#main
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/scatter-wf3.cwl Branch/Commit ID: master Packed ID: main |
