Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	io-int-optional-wf.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/io-int-optional-wf.cwl Branch/Commit ID: 4d06b9efd26c5813c13684ebcc95547bb75ddfcc
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
	02-trim-pe.cwl RNA-seq 02 trimming - reads: PE	https://github.com/Duke-GCB/GGR-cwl.git Path: v1.0/RNA-seq_pipeline/02-trim-pe.cwl Branch/Commit ID: 8d02684ae0ff27e641f3704686e3bc8b1979b854
	count-lines12-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines12-wf.cwl Branch/Commit ID: 9a8e654a91ea5d26e8452dd1cecf3faf22b7a12e
	bam to trimmed fastqs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: 54846feabbf008c1946db2a86d87252e0edd95b0
	Varscan Workflow	https://github.com/genome/cancer-genomics-workflow.git Path: varscan/workflow.cwl Branch/Commit ID: e027d487e5cefba4f446f2036b933955608dbc31
	EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: workflows/emg-qc-paired.cwl Branch/Commit ID: 0cf06f13527b380d21d0f335aaea3e564094ed8f
	Detect Docm variants	https://github.com/genome/cancer-genomics-workflow.git Path: docm/workflow.cwl Branch/Commit ID: e027d487e5cefba4f446f2036b933955608dbc31
	genomel_cohort_freebayes.cwl	https://github.com/uc-cdis/genomel_pipelines.git Path: genomel/genomel_cohort_freebayes.cwl Branch/Commit ID: 28bb82ba031041321ff9caa5c299ec1bb15d7471
	scRNA-seq pipeline using Salmon and Alevin	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: pipeline.cwl Branch/Commit ID: ce04e2cf5cd180448eb6107806b20d867d0411c6