Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph cluster_blastp_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: task_types/tt_cluster_and_qdump.cwl

Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79

workflow graph Run pindel on provided region

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_region.cwl

Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00

workflow graph Per-region pindel

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_cat.cwl

Branch/Commit ID: 441b85003fdc10cf4cbf333d89acb4d23b0fef32

workflow graph wgetkegg_wf.cwl

https://github.com/manabuishii/wgetkegg.git

Path: wgetkegg_wf.cwl

Branch/Commit ID: 4a06d046afb651b9bdebf7ea2c0fdead89dced24

workflow graph exome alignment and germline variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_exome.cwl

Branch/Commit ID: a670f323e77e02d9b77be9a13d73d5276dd3676c

workflow graph Prepare user input

Prepare user input for NCBI-PGAP pipeline

https://github.com/ncbi/pgap.git

Path: prepare_user_input2.cwl

Branch/Commit ID: e71779665f42fcf34601b0f65e030bb0dd47fa79

workflow graph hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather

https://github.com/ncbi/pgap.git

Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl

Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919

workflow graph Filter Protein Seeds I; Find ProSplign Alignments I

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_compart_filter_prosplign.cwl

Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919

workflow graph Seed Protein Alignments I

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_seed_1.cwl

Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919

workflow graph Seed Search Compartments

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_seed.cwl

Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919