Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	1st-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/1st-workflow.cwl Branch/Commit ID: 65aedc5e7e1f3ccace7f9022f8a54b3f0d5c9a8c
	kmer_seq_entry_extract_wnode	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_kmer_seq_entry_extract_wnode.cwl Branch/Commit ID: 0932e4d778ea981cdc19702eab7fc8d572fe8216
	Chipseq alignment for mouse with qc and creating homer tag directory	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/chipseq_alignment_mouse.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416
	Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants_mouse.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416
	downsample unaligned BAM and align	https://github.com/genome/cancer-genomics-workflow.git Path: unaligned_bam_to_bqsr/downsample_workflow.cwl Branch/Commit ID: 8f21f80a504c7fb834af331715a0661707d25537
	Subworkflow that runs cnvkit in single sample mode and returns a vcf file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1
	js_output_workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/js_output_workflow.cwl Branch/Commit ID: 65aedc5e7e1f3ccace7f9022f8a54b3f0d5c9a8c
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome_gvcf.cwl Branch/Commit ID: bed420556091b7b8b45cf20a95e5947e1de9a416
	secret_wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/secret_wf.cwl Branch/Commit ID: 65aedc5e7e1f3ccace7f9022f8a54b3f0d5c9a8c
	mutect parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a