Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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Tumor-Only Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: 457e101e3fb87e7fd792357afce00ed8ccbfbcdb |
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Prepare user input
Prepare user input for NCBI-PGAP pipeline |
https://github.com/ncbi/pgap.git
Path: prepare_user_input2.cwl Branch/Commit ID: 7c8eb4d23c3c9859f57421643710c0b6d57b606c |
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Identifies non-coding RNAs using Rfams covariance models
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https://github.com/mscheremetjew/workflow-is-cwl.git
Path: workflows/cmsearch-multimodel-wf.cwl Branch/Commit ID: 0be3513056e3ebbf7eac38bc1f066d846414bd6d |
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collate_unique_SSU_headers.cwl
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 5dc7c5ca618a248a99bd4bf5f3042cdb21947193 |
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collate_unique_SSU_headers.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 25129f55226dee595ef941edc24d3c44414e0523 |
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assembly-wf-virus.cwl
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https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git
Path: Assembly/workflow/assembly-wf-virus.cwl Branch/Commit ID: 82b291f7d205024b2db7d4106a448c8a65855439 |
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gp_makeblastdb
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https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 6d04f5d65d1d4893706d9ae7e27341633333054f |
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FASTQ to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: 2ae0a374fab650757cdae4391c8cbd32f02edf97 |
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tt_univec_wnode.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: 6d04f5d65d1d4893706d9ae7e27341633333054f |
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scatter-valuefrom-wf1.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/scatter-valuefrom-wf1.cwl Branch/Commit ID: ca8e6661b5cab1f017e5bc4024650722dae4d50b |