Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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EMG QC workflow, (paired end version). Benchmarking with MG-RAST expt.
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/emg-qc-paired.cwl Branch/Commit ID: cff6ca51706f18b1c7052d801d05414f489cec58 |
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default-wf5.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/default-wf5.cwl Branch/Commit ID: 886a6ac41c685f20d39e352f9c657e59f3312265 |
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annotator_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/baminou/OxoG-Dockstore-Tools.git
Path: annotator_sub_wf.cwl Branch/Commit ID: 958b2a392ab2513aa0fbfab558dbf844b549669d |
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count-lines11-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines11-wf.cwl Branch/Commit ID: 886a6ac41c685f20d39e352f9c657e59f3312265 |
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Bacterial Annotation (two-pass) pass 1
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https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass1.cwl Branch/Commit ID: 70e530b65b33301032b7510095d89e497bf5e34e |
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SSU-from-tablehits.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: ca6ca613f0d3728d9589a6ca6293e66dfde87bfb |
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count-lines1-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl Branch/Commit ID: 886a6ac41c685f20d39e352f9c657e59f3312265 |
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bgzip and index VCF
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https://github.com/genome/cancer-genomics-workflow.git
Path: varscan/bgzip_and_index.cwl Branch/Commit ID: 6791f7701b91dd64f9255d6e1ebde5995ebc581e |
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count-lines4-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/count-lines4-wf.cwl Branch/Commit ID: e0cc5bd1c2fc4625f2cb5a819d3c1939aa8460db |
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extract_readgroups_bam.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroups_bam.cwl Branch/Commit ID: b0ff19e4e2944340dca1aceaa20ba10624fa59d0 |