Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph preprocess fastq

Remove and trim low quality reads from fastq files. Return fasta files with reads passed and reads removed.

https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/preprocess-fastq.workflow.cwl

Branch/Commit ID: 932da3abed7166bd5a962871386ba2c31d47b85c
workflow graph integrity.cwl

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/integrity.cwl

Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb
workflow graph runner.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/runner.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb
workflow graph steplevel-resreq.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/steplevel-resreq.cwl

Branch/Commit ID: d9ec78aa015755d07a1c60a9d11f1f5f0a012e1f
workflow graph revcomp.cwl

https://github.com/common-workflow-language/workflows.git

Path: workflows/sanbi_cwltutorial/revcomp/revcomp.cwl

Branch/Commit ID: 08308b3e425e952445d669d6d8e429018d02037b
workflow graph dna.cwl#main

https://github.com/common-workflow-language/workflows.git

Path: workflows/make-to-cwl/dna.cwl

Branch/Commit ID: 08308b3e425e952445d669d6d8e429018d02037b

Packed ID: main
workflow graph PGAP Pipeline

https://github.com/ncbi-gpipe/pgap.git

Path: progs/unit_tests/test_val_stats/test.cwl

Branch/Commit ID: b51e37098871db9fbb7ee0cc642df98ddbb9092b
workflow graph exome_metrics.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/exome_metrics.cwl

Branch/Commit ID: ff015418f870bdfbd82ba675eb549fe8b4584b0c
workflow graph status_postgres.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/status_postgres.cwl

Branch/Commit ID: f34d3963b33e0a379338cb3cb75b0016f012bf2c
workflow graph readgroup_fastq_pe.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroup_fastq_pe.cwl

Branch/Commit ID: cf2e9d7c3cc87ce97a1fbf73fad574b170fedcfb