Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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etl.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/mirnaseq/etl.cwl Branch/Commit ID: 14558b578bad217685ae3c4807ead2a4392d0319 |
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Per-chromosome pindel
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https://github.com/genome/cancer-genomics-workflow.git
Path: pindel/pindel_cat.cwl Branch/Commit ID: 8f21f80a504c7fb834af331715a0661707d25537 |
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count-lines1-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/count-lines1-wf.cwl Branch/Commit ID: 9a8e654a91ea5d26e8452dd1cecf3faf22b7a12e |
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extract_readgroup_fastq_se_http.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_se_http.cwl Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb |
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wgs alignment and germline variant detection
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https://github.com/genome/cancer-genomics-workflow.git
Path: wgs_workflow.cwl Branch/Commit ID: 6eb7d35ad46207f4ff49e84106b717e17331eb4b |
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ROH_workflow.cwl
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https://github.com/wtsi-hgi/arvados-pipelines.git
Path: cwl/workflows/analysis-workflows/ROH_workflow.cwl Branch/Commit ID: 8c9284622ea52a2f0bf24533b46ead59d35a32e9 |
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etl.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/etl.cwl Branch/Commit ID: ff015418f870bdfbd82ba675eb549fe8b4584b0c |
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transform.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/transform.cwl Branch/Commit ID: d5757ab1f3aad3c542950e1dbe8f9d2eec74bede |
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bam to trimmed fastqs and HISAT alignments
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https://github.com/genome/cancer-genomics-workflow.git
Path: rnaseq/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 8f21f80a504c7fb834af331715a0661707d25537 |
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bwa_se.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/bwa_se.cwl Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb |