Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph etl.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/mirnaseq/etl.cwl

Branch/Commit ID: 14558b578bad217685ae3c4807ead2a4392d0319
workflow graph Per-chromosome pindel

https://github.com/genome/cancer-genomics-workflow.git

Path: pindel/pindel_cat.cwl

Branch/Commit ID: 8f21f80a504c7fb834af331715a0661707d25537
workflow graph count-lines1-wf.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/count-lines1-wf.cwl

Branch/Commit ID: 9a8e654a91ea5d26e8452dd1cecf3faf22b7a12e
workflow graph extract_readgroup_fastq_se_http.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/extract_readgroup_fastq_se_http.cwl

Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb
workflow graph wgs alignment and germline variant detection

https://github.com/genome/cancer-genomics-workflow.git

Path: wgs_workflow.cwl

Branch/Commit ID: 6eb7d35ad46207f4ff49e84106b717e17331eb4b
workflow graph ROH_workflow.cwl

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/analysis-workflows/ROH_workflow.cwl

Branch/Commit ID: 8c9284622ea52a2f0bf24533b46ead59d35a32e9
workflow graph etl.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/etl.cwl

Branch/Commit ID: ff015418f870bdfbd82ba675eb549fe8b4584b0c
workflow graph transform.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/dnaseq/transform.cwl

Branch/Commit ID: d5757ab1f3aad3c542950e1dbe8f9d2eec74bede
workflow graph bam to trimmed fastqs and HISAT alignments

https://github.com/genome/cancer-genomics-workflow.git

Path: rnaseq/bam_to_trimmed_fastq_and_hisat_alignments.cwl

Branch/Commit ID: 8f21f80a504c7fb834af331715a0661707d25537
workflow graph bwa_se.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/bwa_se.cwl

Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb