Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Hello World

Outputs a message using echo

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/hello-workflow.cwl

Branch/Commit ID: 9e7c68c0834645ba53a7e2b5f70d53df9d051c92

workflow graph Varscan Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: ddd748516b25256a461ea9277303406fa2759b00

workflow graph exome alignment with qc, no bqsr, no verify_bam_id

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/exome_alignment_mouse.cwl

Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300

workflow graph bwa_se.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/bwa_se.cwl

Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52

workflow graph strelka workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/strelka_and_post_processing.cwl

Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533

workflow graph bwa_pe.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/bwa_pe.cwl

Branch/Commit ID: 18affdd927cc388fab2c113dc2ec6df782af2a52

workflow graph Raw sequence data to BQSR

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sequence_to_bqsr.cwl

Branch/Commit ID: 26806d99f8e2a241715fd081e712d4e3763db5b8

workflow graph Exome QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_exome.cwl

Branch/Commit ID: 26806d99f8e2a241715fd081e712d4e3763db5b8

workflow graph Raw sequence data to BQSR

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sequence_to_bqsr.cwl

Branch/Commit ID: 6f9f8a2057c6a9f221a44559f671e87a75c70075

workflow graph Align reference proteins plane complete workflow

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_protein_alignment.cwl

Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942