Workflow: combine_counts.cwl
Fetched 2024-11-23 10:12:59 GMT
Verified with cwltool version 3.1.20221201130942
Combines read counts (generated by the 01_mpileups workflow) from multiple files into one file.
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
MIT License
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| replicates | File[] |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| combine_counts |
combine_counts/combine_counts.cwl
(CommandLineTool)
|
Combines read counts (generated by the 01_mpileups workflow) from multiple files into one file. |
|
| replicate_split |
replicate_split/replicate_split.cwl
(ExpressionTool)
|
Groups replicate into input and output replicates |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| merged_counts | File |
Permalink:
https://w3id.org/cwl/view/git/5e08b9b8a0323a1f4740a65bdb356e9b75074093/02_combine_counts/combine_counts.cwl
