Workflow: extract_readgroup_fastq_pe.cwl

Fetched 2019-01-18 23:38:59 GMT
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Inputs

ID Type Title Doc
readgroup_fastq_pe_uuid https://w3id.org/cwl/view/git/0c1a40ea1efb1656644ccec0b7abe659539340e7/tools/readgroup.yml#readgroup_fastq_pe_uuid
bioclient_config File

Steps

ID Runs Label Doc
emit_readgroup_fastq_pe_file
../../tools/emit_readgroup_fastq_pe_file.cwl (ExpressionTool)
extract_reverse_fastq
../../tools/bio_client_download.cwl (CommandLineTool)
extract_forward_fastq
../../tools/bio_client_download.cwl (CommandLineTool)

Outputs

ID Type Label Doc
output https://w3id.org/cwl/view/git/0c1a40ea1efb1656644ccec0b7abe659539340e7/tools/readgroup.yml#readgroup_fastq_pe_file
Permalink: https://w3id.org/cwl/view/git/0c1a40ea1efb1656644ccec0b7abe659539340e7/workflows/bamfastq_align/extract_readgroup_fastq_pe.cwl