Workflow: protein_extract
Fetched 2024-12-20 05:50:22 GMT
Verified with cwltool version 3.1.20230201224320
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This workflow is Open Source and may be reused according to the terms of:
https://raw.githubusercontent.com/ncbi/pgap/803f6367d1b279a7b6dc1a4e8ae43f1bbec9f760/LICENSE.md
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| input | File | ||
| olds2 | String (Optional) | ||
| oseqids | String (Optional) | ||
| nogenbank | Boolean | ||
| oproteins | String (Optional) |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| lds2_fix |
protein_extract.cwl#lds2_fix/dd42ca01-3445-4946-9e69-c9a8bbe0e26d
(CommandLineTool)
|
||
| protein_extract |
protein_extract.cwl#protein_extract/23273d5d-937a-4af4-a3fa-a75937de9204
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| lds2 | File | ||
| seqids | File | ||
| proteins | File |
Permalink:
https://w3id.org/cwl/view/git/803f6367d1b279a7b6dc1a4e8ae43f1bbec9f760/progs/protein_extract.cwl
