Workflow: workflow-transeq-blast-clustalo.cwl
Fetched 2026-03-09 00:42:33 GMT
Verified with cwltool version 3.1.20230201224320
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
This workflow is Open Source and may be reused according to the terms of:
Apache License 2.0
Note that the tools invoked by the workflow may have separate licenses.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| type | String | ||
| String | |||
| stype | String | ||
| method | String | ||
| program | String | ||
| database | String | ||
| sequence | File | ||
| outformat | String | ||
| numberAccessions | String |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| dbfetch_step |
dbfetch.cwl
(CommandLineTool)
|
||
| transeq_step |
emboss_transeq.cwl
(CommandLineTool)
|
||
| clustalo_step |
clustalo.cwl
(CommandLineTool)
|
||
| iprscan5_step |
iprscan5.cwl
(CommandLineTool)
|
||
| ncbiblast_step |
ncbiblast.cwl
(CommandLineTool)
|
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| iprscan5_output | File | ||
| workflow_output | File |
Permalink:
https://w3id.org/cwl/view/git/88b9948c4977ca90ab5ceb391b2235043135480d/workflows/workflow-transeq-blast-clustalo.cwl
