Workflow: runner.cwl

Fetched 2023-01-11 11:39:57 GMT
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Inputs

ID Type Title Doc
repo String
uuid String
repo_hash String
aws_config File
load_bucket String
db_cred_path File
thread_count Integer
endpoint_json File
bam_signpost_id String
db_cred_section String
signpost_base_url String
status_table_name String
db_snp_signpost_id String
load_s3cfg_section String
aws_shared_credentials File
reference_fa_signpost_id String
reference_sa_signpost_id String
reference_amb_signpost_id String
reference_ann_signpost_id String
reference_bwt_signpost_id String
reference_fai_signpost_id String
reference_pac_signpost_id String

Steps

ID Runs Label Doc
etl
etl.cwl (Workflow)
status_running
status_complete

Outputs

ID Type Label Doc
token File
html json turtle jsonld rdfxml svg png dot zip ro yaml raw
Permalink: https://w3id.org/cwl/view/git/23819c2a0dcd98b61487cbc82e602dd58cb4d342/workflows/dnaseq/runner.cwl