Workflow: annotator_sub_wf.cwl
Fetched 2024-04-19 01:23:36 GMT
Verified with cwltool version 3.1.20221201130942
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!
- Selected
- |
- Default Values
- Nested Workflows
- Tools
- Inputs/Outputs
Unknown workflow license, check
source repository.
Inputs
| ID | Type | Title | Doc |
|---|---|---|---|
| VCFs | File[] | ||
| normalBam | File | ||
| tumourBams | File[] | ||
| variantType | String | ||
| tumour_record | https://w3id.org/cwl/view/git/b4a02b7ba5733b3cc5b84b79ab0634ff9e4d1aeb/TumourType.yaml#TumourType |
Steps
| ID | Runs | Label | Doc |
|---|---|---|---|
| chooseVCFsToAnnotate |
Outputs
| ID | Type | Label | Doc |
|---|---|---|---|
| annotated_vcfs | File[] |
Permalink:
https://w3id.org/cwl/view/git/b4a02b7ba5733b3cc5b84b79ab0634ff9e4d1aeb/annotator_sub_wf.cwl
