Workflow: zip_and_index_vcf.cwl

Fetched 2019-06-26 19:31:18 GMT

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

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Inputs

ID Type Title Doc
vcf File

Steps

ID Runs Label Doc
index_step
zip_and_index_vcf.cwl#index_step/f2b34d90-0123-4913-9ace-f11cae71dd2c (CommandLineTool)
zip_step
zip_and_index_vcf.cwl#zip_step/3ef25175-06bd-4e6b-9572-95e53466e293 (CommandLineTool)

Outputs

ID Type Label Doc
zipped_file File
indexed_file File
Permalink: https://w3id.org/cwl/view/git/b38a8a4785746b8267913ea5389e21ae6dc921a3/zip_and_index_vcf.cwl