digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 368 460 368 460 0 ",
		bb="0,0,460,368",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 305 8 360 452 360 452 305 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 348 0 84 15 -Workflow Inputs ",
			bb="8,305,452,360",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,350.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		max_len	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 313.5 16.5 332.5 75.5 332.5 75.5 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 46 320.5 0 43 7 -max_len ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=max_len,
			pos="46,323",
			rects="16.5,313.5,75.5,332.5",
			width=0.81944];
		enable_codex	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 300 313.5 300 332.5 384 332.5 384 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 342 320.5 0 68 12 -enable_codex ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=enable_codex,
			pos="342,323",
			rects="300,313.5,384,332.5",
			width=1.1667];
		bed	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 260.5 313.5 260.5 332.5 295.5 332.5 295.5 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 278 320.5 0 19 3 -bed ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bed,
			pos="278,323",
			rects="260.5,313.5,295.5,332.5",
			width=0.48611];
		min_lratio	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 80 313.5 80 332.5 146 332.5 146 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 113 320.5 0 50 10 -min_lratio ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=min_lratio,
			pos="113,323",
			rects="80,313.5,146,332.5",
			width=0.91667];
		samples	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 150 313.5 150 332.5 208 332.5 208 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 179 320.5 0 42 7 -samples ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=samples,
			pos="179,323",
			rects="150,313.5,208,332.5",
			width=0.80556];
		min_len	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 388 313.5 388 332.5 444 332.5 444 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 416 320.5 0 40 7 -min_len ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=min_len,
			pos="416,323",
			rects="388,313.5,444,332.5",
			width=0.77778];
		bams	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 212 313.5 212 332.5 256 332.5 256 313.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 234 320.5 0 28 4 -bams ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bams,
			pos="234,323",
			rects="212,313.5,256,332.5",
			width=0.61111];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 107 8 107 63 215 63 215 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 161 15 0 92 16 -Workflow Outputs ",
			bb="107,8,215,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="161,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		output	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 137 35.5 137 54.5 185 54.5 185 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 161 42.5 0 32 6 -output ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=output,
			pos="161,45",
			rects="137,35.5,185,54.5",
			width=0.66667];
	}
	codex_filter	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 124 170.5 124 189.5 198 189.5 198 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 161 177.5 0 58 12 -codex_filter ",
		height=0.27778,
		pos="161,180",
		rects="124,170.5,198,189.5",
		width=1.0278];
	max_len -> codex_filter	[_draw_="c 7 -#000000 B 7 48.53 313.95 53.54 298.88 65.84 265.89 84 243 99.96 222.88 123.57 205.1 140.43 193.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 141.42 196.08 145.94 190.19 138.74 191.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 101 245.6 0 34 7 -max_len ",
		label=max_len,
		lp="101,247.5",
		pos="e,147.2,189.36 48.532,313.95 53.545,298.88 65.84,265.89 84,243 99.959,222.88 123.57,205.1 140.43,193.8"];
	codex	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 210 215.5 210 234.5 256 234.5 256 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 233 222.5 0 30 5 -codex ",
		height=0.27778,
		pos="233,225",
		rects="210,215.5,256,234.5",
		width=0.63889];
	bed -> codex	[_draw_="c 7 -#000000 B 7 279.62 313.84 281.64 301.45 283.87 277.49 275 260 270.71 251.54 263.26 244.47 255.82 239 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 257.5 237.17 250.33 235.28 254.75 241.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 288 268.1 0 16 3 -bed ",
		label=bed,
		lp="288,270",
		pos="e,249.07,234.43 279.62,313.84 281.64,301.45 283.87,277.49 275,260 270.71,251.54 263.26,244.47 255.82,239"];
	min_lratio -> codex_filter	[_draw_="c 7 -#000000 B 7 112.75 313.89 112.56 299.28 113.32 267.75 122 243 128.14 225.51 139.93 207.84 148.94 195.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 150.84 197.42 153.2 190.39 146.97 194.41 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 142 245.6 0 40 10 -min_lratio ",
		label=min_lratio,
		lp="142,247.5",
		pos="e,154.13,189.19 112.75,313.89 112.56,299.28 113.32,267.75 122,243 128.14,225.51 139.93,207.84 148.94,195.86"];
	samples -> codex_filter	[_draw_="c 7 -#000000 B 7 176.35 313.73 173.77 305.33 169.96 291.9 168 280 163.28 251.36 161.74 217.55 161.24 197.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 163.69 197.74 161.1 190.79 158.79 197.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 181.5 245.6 0 35 7 -samples ",
		label=samples,
		lp="181.5,247.5",
		pos="e,161.07,189.27 176.35,313.73 173.77,305.33 169.96,291.9 168,280 163.28,251.36 161.74,217.55 161.24,197.77"];
	batch_parser	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 168 260.5 168 279.5 248 279.5 248 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 208 267.5 0 64 12 -batch_parser ",
		height=0.27778,
		pos="208,270",
		rects="168,260.5,248,279.5",
		width=1.1111];
	samples -> batch_parser	[_draw_="c 7 -#000000 B 7 177.46 313.56 176.58 306.27 176.43 295.74 181 288 181.63 286.93 182.37 285.91 183.17 284.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 184.65 286.91 188.22 280.41 181.38 283.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 198.5 290.6 0 35 7 -samples ",
		label=samples,
		lp="198.5,292.5",
		pos="e,189.35,279.4 177.46,313.56 176.58,306.27 176.43,295.74 181,288 181.63,286.93 182.37,285.91 183.17,284.95"];
	min_len -> codex_filter	[_draw_="c 7 -#000000 B 7 406.52 313.7 380.05 291.03 302.32 227.79 226 198 219.6 195.5 212.7 193.25 205.87 191.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 206.78 188.98 199.37 189.47 205.47 193.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 340 245.6 0 32 7 -min_len ",
		label=min_len,
		lp="340,247.5",
		pos="e,197.92,189.07 406.52,313.7 380.05,291.03 302.32,227.79 226,198 219.6,195.5 212.7,193.25 205.87,191.27"];
	bams -> batch_parser	[_draw_="c 7 -#000000 B 4 229.71 313.58 226 306.3 220.53 295.59 216.02 286.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 218.26 285.74 212.9 280.61 213.9 287.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 232 290.6 0 22 5 -input ",
		label=input,
		lp="232,292.5",
		pos="e,212.21,279.26 229.71,313.58 226,306.3 220.53,295.59 216.02,286.73"];
	bams -> codex	[_draw_="c 7 -#000000 B 7 238.43 313.87 245.78 299.23 258.78 267.66 249 243 248.76 242.41 248.5 241.82 248.2 241.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 250.24 239.88 244.15 235.65 246.27 242.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 263 268.1 0 22 5 -input ",
		label=input,
		lp="263,270",
		pos="e,243.26,234.42 238.43,313.87 245.78,299.23 258.78,267.66 249,243 248.76,242.41 248.5,241.82 248.2,241.25"];
	codex_union	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 122 125.5 122 144.5 200 144.5 200 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 161 132.5 0 62 11 -codex_union ",
		height=0.27778,
		pos="161,135",
		rects="122,125.5,200,144.5",
		width=1.0833];
	codex_filter -> codex_union	[_draw_="c 7 -#000000 B 4 161 170.71 161 165.59 161 158.85 161 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 163.45 152.78 161 145.78 158.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 172 155.6 0 22 5 -input ",
		label=input,
		lp="172,157.5",
		pos="e,161,144.27 161,170.71 161,165.59 161,158.85 161,152.67"];
	codex_merge	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 119.5 80.5 119.5 99.5 202.5 99.5 202.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 161 87.5 0 67 11 -codex_merge ",
		height=0.27778,
		pos="161,90",
		rects="119.5,80.5,202.5,99.5",
		width=1.1528];
	codex_union -> codex_merge	[_draw_="c 7 -#000000 B 4 161 125.71 161 120.59 161 113.85 161 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 163.45 107.78 161 100.78 158.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 172 110.6 0 22 5 -input ",
		label=input,
		lp="172,112.5",
		pos="e,161,99.265 161,125.71 161,120.59 161,113.85 161,107.67"];
	batch_parser -> codex	[_draw_="c 7 -#000000 B 7 209.02 260.81 209.97 255.45 211.74 248.46 215 243 215.55 242.09 216.15 241.19 216.81 240.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 218.5 242.1 221.4 235.28 214.88 238.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 233.5 245.6 0 37 7 -mapping ",
		label=mapping,
		lp="233.5,247.5",
		pos="e,222.42,234.16 209.02,260.81 209.97,255.45 211.74,248.46 215,243 215.55,242.09 216.15,241.19 216.81,240.32"];
	codex -> codex_filter	[_draw_="c 7 -#000000 B 4 218.78 215.5 208.42 209.32 194.22 200.84 182.48 193.83 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 183.76 191.74 176.49 190.25 181.25 195.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 214 200.6 0 22 5 -input ",
		label=input,
		lp="214,202.5",
		pos="e,175.2,189.48 218.78,215.5 208.42,209.32 194.22,200.84 182.48,193.83"];
	codex_merge -> output	[_draw_="c 7 -#000000 B 4 161 80.71 161 75.59 161 68.85 161 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 163.45 62.78 161 55.78 158.55 62.78 ",
		pos="e,161,54.265 161,80.709 161,75.593 161,68.848 161,62.666"];
}