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	fraggenescan_prob_stop1 -> fraggenescan	[_draw_="c 7 -#000000 B 10 1618.51 313.56 1584.5 300.47 1515.96 275.21 1456 260 1413.15 249.13 1401.75 249.35 1358 243 1339.43 240.3 1319.47 \
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	fraggenescan_prob_forward -> fraggenescan	[_draw_="c 7 -#000000 B 10 1766.25 313.59 1725.45 300.07 1641.28 273.64 1568 260 1491.18 245.7 1470.79 250.45 1393 243 1366.52 240.46 1337.85 \
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	mapseq_ref -> classify_SSUs	[_draw_="c 7 -#000000 B 10 185.02 313.74 195.05 304.47 209 288.45 209 271 209 271 209 271 209 134 209 103.14 248.05 93.9 278.75 91.41 ",
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	reverse_reads -> assembly	[_draw_="c 7 -#000000 B 7 431.41 313.5 443.68 305.54 463.3 293.99 482 288 490.44 285.3 499.3 283.02 508.29 281.1 ",
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		lp="511,292.5",
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	covariance_model_database -> cmscan	[_draw_="c 7 -#000000 B 7 279.48 313.54 260.78 301.58 232.32 279.04 247 260 255.07 249.53 281.61 241.63 308.53 236.1 ",
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	assembly_mem_limit -> assembly	[_draw_="c 7 -#000000 B 4 617 313.58 617 306.52 617 296.24 617 287.55 ",
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		label=prob_stop,
		lp="1282.5,270",
		pos="e,1225,234.49 1329.5,313.52 1307.2,307.34 1280.8,296.98 1262,280 1254.6,273.34 1258.1,267.86 1252,260 1246.2,252.54 1238.6,245.48 \
1231.7,239.75"];
	fraggenescan -> pCDS	[_draw_="c 7 -#000000 B 10 1073.16 220.47 967.65 215.86 841 205.28 841 181 841 181 841 181 841 89 841 78.58 835.34 68.52 829.3 60.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 831.2 59.21 824.79 55.48 827.47 62.39 ",
		pos="e,823.8,54.328 1073.2,220.47 967.65,215.86 841,205.28 841,181 841,181 841,181 841,89 841,78.58 835.34,68.524 829.3,60.759"];
	remove_asterisks_and_reformat	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 912 125.5 912 144.5 1018 144.5 1018 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 965 132.5 0 90 18 -normalize to fasta ",
		height=0.27778,
		label="normalize to fasta",
		pos="965,135",
		rects="912,125.5,1018,144.5",
		width=1.4722];
	fraggenescan -> remove_asterisks_and_reformat	[_draw_="c 7 -#000000 B 4 1189.22 215.56 1144.32 199.63 1047.04 165.11 996.67 147.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 997.55 144.95 990.13 144.92 995.91 149.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1136 178.1 0 46 9 -sequences ",
		label=sequences,
		lp="1136,180",
		pos="e,988.71,144.41 1189.2,215.56 1144.3,199.63 1047,165.11 996.67,147.24"];
	get_SSU_coords	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 361.5 170.5 361.5 189.5 456.5 189.5 456.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 409 177.5 0 79 14 -get_SSU_coords ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label=get_SSU_coords,
		pos="409,180",
		rects="361.5,170.5,456.5,189.5",
		width=1.3194];
	cmscan -> get_SSU_coords	[_draw_="c 7 -#000000 B 4 382.36 215.71 386.65 210.12 392.44 202.58 397.52 195.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 399.42 197.51 401.74 190.47 395.53 194.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 416 200.6 0 40 10 -table_hits ",
		label=table_hits,
		lp="416,202.5",
		pos="e,402.66,189.27 382.36,215.71 386.65,210.12 392.44,202.58 397.52,195.96"];
	extract_SSUs	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 382 125.5 382 144.5 634 144.5 634 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 508 132.5 0 236 46 -extract by names from an indexed sequence file ",
		height=0.27778,
		label="extract by names from an indexed sequence file",
		pos="508,135",
		rects="382,125.5,634,144.5",
		width=3.5];
	extract_SSUs -> SSUs	[_draw_="c 7 -#000000 B 7 533.31 125.58 567.58 113.72 630.21 90.45 680 63 682.1 61.84 684.23 60.54 686.32 59.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 687.49 61.35 691.86 55.36 684.71 57.32 ",
		pos="e,693.11,54.498 533.31,125.58 567.58,113.72 630.21,90.453 680,63 682.1,61.844 684.23,60.542 686.32,59.185"];
	extract_SSUs -> classify_SSUs	[_draw_="c 7 -#000000 B 4 469.87 125.5 435.34 117.81 384.83 106.56 350.98 99.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 351.59 96.64 344.23 97.51 350.53 101.43 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 452 110.6 0 46 9 -sequences ",
		label=sequences,
		lp="452,112.5",
		pos="e,342.75,97.183 469.87,125.5 435.34,117.81 384.83,106.56 350.98,99.016"];
	get_SSU_coords -> extract_SSUs	[_draw_="c 7 -#000000 B 4 428.56 170.5 443.47 164.03 464.2 155.02 480.74 147.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 481.65 150.12 487.09 145.08 479.7 145.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 482 155.6 0 28 5 -names ",
		label=names,
		lp="482,157.5",
		pos="e,488.48,144.48 428.56,170.5 443.47,164.03 464.2,155.02 480.74,147.84"];
	assembly -> scaffolds	[_draw_="c 7 -#000000 B 10 684.26 260.55 720.96 253.98 759 243.06 759 226 759 226 759 226 759 89 759 80.31 759 70.63 759 62.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 761.45 62.76 759 55.76 756.55 62.76 ",
		pos="e,759,54.243 684.26,260.55 720.96,253.98 759,243.06 759,226 759,226 759,226 759,89 759,80.308 759,70.627 759,62.655"];
	assembly -> fraggenescan	[_draw_="c 7 -#000000 B 10 698.6 260.51 719.62 258.05 742.19 255.16 763 252 784.46 248.74 789.44 245.46 811 243 894.7 233.43 988.76 229.11 \
1064.84 227.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1064.63 229.66 1071.57 227.05 1064.52 224.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 831.5 245.6 0 41 8 -sequence ",
		label=sequence,
		lp="831.5,247.5",
		pos="e,1073.1,227.01 698.6,260.51 719.62,258.05 742.19,255.16 763,252 784.46,248.74 789.44,245.46 811,243 894.7,233.43 988.76,229.11 \
1064.8,227.21"];
	assembly -> cmscan	[_draw_="c 7 -#000000 B 10 582.79 260.58 572.82 257.99 561.93 255.01 552 252 540.3 248.45 537.93 245.7 526 243 513.19 240.1 499.66 237.68 \
486.16 235.66 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 486.55 233.24 479.27 234.68 485.85 238.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 588.5 245.6 0 73 15 -query_sequences ",
		label=query_sequences,
		lp="588.5,247.5",
		pos="e,477.77,234.46 582.79,260.58 572.82,257.99 561.93,255.01 552,252 540.3,248.45 537.93,245.7 526,243 513.19,240.1 499.66,237.68 486.16,\
235.66"];
	index_scaffolds	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 528.5 215.5 528.5 234.5 751.5 234.5 751.5 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 640 222.5 0 207 43 -index a sequence file for use by esl-sfetch ",
		height=0.27778,
		label="index a sequence file for use by esl-sfetch",
		pos="640,225",
		rects="528.5,215.5,751.5,234.5",
		width=3.0972];
	assembly -> index_scaffolds	[_draw_="c 7 -#000000 B 4 621.43 260.71 624.36 255.24 628.29 247.9 631.77 241.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 633.72 242.93 634.87 235.6 629.4 240.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 653 245.6 0 46 9 -sequences ",
		label=sequences,
		lp="653,247.5",
		pos="e,635.58,234.27 621.43,260.71 624.36,255.24 628.29,247.9 631.77,241.38"];
	index_scaffolds -> extract_SSUs	[_draw_="c 7 -#000000 B 7 580.94 215.54 551.08 209.95 519.23 201.51 510 190 501.67 179.62 501.96 164.16 503.87 152.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 506.22 153.19 505.23 145.84 501.42 152.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 551 178.1 0 82 17 -indexed_sequences ",
		label=indexed_sequences,
		lp="551,180",
		pos="e,505.53,144.36 580.94,215.54 551.08,209.95 519.23,201.51 510,190 501.67,179.62 501.96,164.16 503.87,152.44"];
	classify_SSUs -> classifications	[_draw_="c 7 -#000000 B 4 342.93 85.26 396.94 78.02 516.42 62.02 584.98 52.83 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 584.97 55.31 591.58 51.95 584.32 50.45 ",
		pos="e,593.09,51.749 342.93,85.259 396.94,78.024 516.42,62.018 584.98,52.834"];
	interproscan	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1038.5 80.5 1038.5 99.5 1253.5 99.5 1253.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1146 87.5 0 199 41 -InterProScan: protein sequence classifier ",
		height=0.27778,
		label="InterProScan: protein sequence classifier",
		pos="1146,90",
		rects="1038.5,80.5,1253.5,99.5",
		width=2.9861];
	interproscan -> annotations	[_draw_="c 7 -#000000 B 4 1093.05 80.5 1043.4 72.54 969.98 60.76 923.07 53.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 923.71 50.85 916.41 52.16 922.93 55.69 ",
		pos="e,914.91,51.923 1093.1,80.505 1043.4,72.539 969.98,60.758 923.07,53.231"];
	remove_asterisks_and_reformat -> interproscan	[_draw_="c 7 -#000000 B 7 984.57 125.51 998.42 119.8 1017.56 112.52 1035 108 1045.63 105.24 1056.96 102.88 1068.16 100.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1068.31 103.32 1074.79 99.71 1067.47 98.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1056.5 110.6 0 43 11 -proteinFile ",
		label=proteinFile,
		lp="1056.5,112.5",
		pos="e,1076.3,99.455 984.57,125.51 998.42,119.8 1017.6,112.52 1035,108 1045.6,105.24 1057,102.88 1068.2,100.86"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1305 260.5 1305 279.5 1341 279.5 1341 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1323 267.5 0 20 4 -true ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label=true,
		pos="1323,270",
		rects="1305,260.5,1341,279.5",
		width=0.5];
	default1 -> fraggenescan	[_draw_="c 7 -#000000 B 7 1305.11 260.59 1293.5 255.27 1277.99 248.4 1264 243 1258.79 240.99 1253.24 238.99 1247.78 237.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1248.75 234.85 1241.33 234.93 1247.18 239.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1312.5 245.6 0 55 11 -completeSeq ",
		label=completeSeq,
		lp="1312.5,247.5",
		pos="e,1239.9,234.45 1305.1,260.59 1293.5,255.27 1278,248.4 1264,243 1258.8,240.99 1253.2,238.99 1247.8,237.11"];
	default2	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 367 260.5 367 279.5 403 279.5 403 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 385 267.5 0 20 4 -true ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label=true,
		pos="385,270",
		rects="367,260.5,403,279.5",
		width=0.5];
	default2 -> cmscan	[_draw_="c 7 -#000000 B 4 383.26 260.71 382.17 255.47 380.72 248.53 379.4 242.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 381.87 242.1 378.04 235.75 377.08 243.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 403 245.6 0 42 8 -only_hmm ",
		label=only_hmm,
		lp="403,247.5",
		pos="e,377.73,234.27 383.26,260.71 382.17,255.47 380.72,248.53 379.4,242.24"];
	default3	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 412 260.5 412 279.5 448 279.5 448 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 430 267.5 0 20 4 -true ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label=true,
		pos="430,270",
		rects="412,260.5,448,279.5",
		width=0.5];
	default3 -> cmscan	[_draw_="c 7 -#000000 B 7 429.36 260.78 428.51 255.13 426.54 247.8 422 243 420.52 241.43 418.87 240.01 417.12 238.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 418.45 236.65 411.19 235.12 415.91 240.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 476.5 245.6 0 97 22 -omit_alignment_section ",
		label=omit_alignment_section,
		lp="476.5,247.5",
		pos="e,409.9,234.34 429.36,260.78 428.51,255.13 426.54,247.8 422,243 420.52,241.43 418.87,240.01 417.12,238.71"];
	default4	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 594 170.5 594 189.5 630 189.5 630 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 612 177.5 0 20 4 -true ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label=true,
		pos="612,180",
		rects="594,170.5,630,189.5",
		width=0.5];
	default4 -> extract_SSUs	[_draw_="c 7 -#000000 B 4 594.36 171.71 578.41 165.11 554.64 155.29 536.08 147.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 537.03 145.35 529.62 144.94 535.16 149.88 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 633 155.6 0 128 27 -names_contain_subseq_coords ",
		label=names_contain_subseq_coords,
		lp="633,157.5",
		pos="e,528.23,144.36 594.36,171.71 578.41,165.11 554.64,155.29 536.08,147.61"];
	default5	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1022.5 125.5 1022.5 144.5 1091.5 144.5 1091.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1057 132.5 0 53 9 -\"TIGRFAM\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"TIGRFAM\"",
		pos="1057,135",
		rects="1022.5,125.5,1091.5,144.5",
		width=0.95833];
	default5 -> interproscan	[_draw_="c 7 -#000000 B 7 1067.16 125.61 1074.32 120.03 1084.31 112.85 1094 108 1098.24 105.87 1102.81 103.93 1107.42 102.18 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1107.96 104.59 1113.72 99.93 1106.31 99.98 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1119.5 110.6 0 51 12 -applications ",
		label=applications,
		lp="1119.5,112.5",
		pos="e,1115.1,99.416 1067.2,125.61 1074.3,120.03 1084.3,112.85 1094,108 1098.2,105.87 1102.8,103.93 1107.4,102.18"];
	default6	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1096 125.5 1096 144.5 1196 144.5 1196 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1146 132.5 0 84 17 -\"ProSitePatterns\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"ProSitePatterns\"",
		pos="1146,135",
		rects="1096,125.5,1196,144.5",
		width=1.3889];
	default6 -> interproscan	[_draw_="c 7 -#000000 B 4 1146 125.71 1146 120.59 1146 113.85 1146 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1148.45 107.78 1146 100.78 1143.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1171.5 110.6 0 51 12 -applications ",
		label=applications,
		lp="1171.5,112.5",
		pos="e,1146,99.265 1146,125.71 1146,120.59 1146,113.85 1146,107.67"];
	default7	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1200.5 125.5 1200.5 144.5 1251.5 144.5 1251.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1226 132.5 0 35 6 -\"Pfam\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"Pfam\"",
		pos="1226,135",
		rects="1200.5,125.5,1251.5,144.5",
		width=0.70833];
	default7 -> interproscan	[_draw_="c 7 -#000000 B 7 1218.89 125.73 1213.63 120.05 1206 112.71 1198 108 1194.55 105.97 1190.83 104.14 1187.01 102.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1187.94 100.25 1180.53 99.99 1186.16 104.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1234.5 110.6 0 51 12 -applications ",
		label=applications,
		lp="1234.5,112.5",
		pos="e,1179.1,99.442 1218.9,125.73 1213.6,120.05 1206,112.71 1198,108 1194.5,105.97 1190.8,104.14 1187,102.52"];
	default8	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1255.5 125.5 1255.5 144.5 1316.5 144.5 1316.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1286 132.5 0 45 8 -\"PRINTS\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"PRINTS\"",
		pos="1286,135",
		rects="1255.5,125.5,1316.5,144.5",
		width=0.84722];
	default8 -> interproscan	[_draw_="c 7 -#000000 B 7 1280.24 125.55 1275.73 119.63 1268.9 112.07 1261 108 1256.69 105.78 1252.18 103.82 1247.54 102.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1248.47 99.84 1241.05 99.92 1246.9 104.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1297.5 110.6 0 51 12 -applications ",
		label=applications,
		lp="1297.5,112.5",
		pos="e,1239.6,99.435 1280.2,125.55 1275.7,119.63 1268.9,112.07 1261,108 1256.7,105.78 1252.2,103.82 1247.5,102.11"];
	default9	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 1320.5 125.5 1320.5 144.5 1385.5 144.5 1385.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1353 132.5 0 49 8 -\"Gene3D\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"Gene3D\"",
		pos="1353,135",
		rects="1320.5,125.5,1385.5,144.5",
		width=0.90278];
	default9 -> interproscan	[_draw_="c 7 -#000000 B 7 1346.33 125.67 1340.98 119.65 1332.92 111.91 1324 108 1311.83 102.66 1287.88 99 1261.39 96.48 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1261.8 94.05 1254.61 95.87 1261.36 98.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1362.5 110.6 0 51 12 -applications ",
		label=applications,
		lp="1362.5,112.5",
		pos="e,1253.1,95.731 1346.3,125.67 1341,119.65 1332.9,111.91 1324,108 1311.8,102.66 1287.9,98.996 1261.4,96.476"];
	default10	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 914 170.5 914 189.5 1016 189.5 1016 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 965 177.5 0 86 16 -[Complex Object] ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="[Complex Object]",
		pos="965,180",
		rects="914,170.5,1016,189.5",
		width=1.4167];
	default10 -> remove_asterisks_and_reformat	[_draw_="c 7 -#000000 B 4 965 170.71 965 165.59 965 158.85 965 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 967.45 152.78 965 145.78 962.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 980.5 155.6 0 31 7 -replace ",
		label=replace,
		lp="980.5,157.5",
		pos="e,965,144.27 965,170.71 965,165.59 965,158.85 965,152.67"];
}
