digraph workflow {
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		taxid	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 217.5 448.5 217.5 467.5 258.5 467.5 258.5 448.5 ",
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		taxon_db	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 152.5 448.5 152.5 467.5 213.5 467.5 213.5 448.5 ",
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		blastdb_dir	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 684.5 448.5 684.5 467.5 755.5 467.5 755.5 448.5 ",
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		genomic_ids	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 263 448.5 263 467.5 341 467.5 341 448.5 ",
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	}
	subgraph cluster_outputs {
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			bb="654,8,762,63",
			label="Workflow Outputs",
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			lheight=0.15,
			lp="708,17.5",
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		align	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 687.5 35.5 687.5 54.5 728.5 54.5 728.5 35.5 ",
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			label=align,
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			width=0.56944];
	}
	Compute_Gencode	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 0 395.5 0 414.5 106 414.5 106 395.5 ",
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		label=compute_gencode,
		pos="53,405",
		rects="0,395.5,106,414.5",
		width=1.4722];
	taxid -> Compute_Gencode	[_draw_="c 7 -#000000 B 10 228.88 448.71 224.66 445.38 219.4 441.89 214 440 185.22 429.91 104.57 445.04 77 432 71.75 429.52 67.11 425.33 \
63.34 421.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 65.34 419.61 59.1 415.6 61.48 422.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 87.5 425.6 0 21 5 -taxid ",
		label=taxid,
		lp="87.5,427.5",
		pos="e,58.17,414.4 228.88,448.71 224.66,445.38 219.4,441.89 214,440 185.22,429.91 104.57,445.04 77,432 71.752,429.52 67.109,425.33 63.338,\
421.02"];
	Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 575 215.5 575 234.5 745 234.5 745 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 660 222.5 0 154 31 -Filter Full-Coverage Alignments ",
		height=0.27778,
		label="Filter Full-Coverage Alignments",
		pos="660,225",
		rects="575,215.5,745,234.5",
		width=2.3611];
	uniColl_asn_cache -> Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 B 19 487.75 448.75 485.92 443.91 483.67 437.66 482 432 471.42 396.12 473.81 385.81 463 350 460.78 342.66 456.13 339.62 \
460 333 476.48 304.83 496.44 314.48 524 297 547.95 281.8 551.13 273.64 576 260 592.09 251.18 610.96 243.33 626.74 237.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 627.53 239.73 633.25 235.02 625.84 235.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 498 335.6 0 76 17 -uniColl_asn_cache ",
		label=uniColl_asn_cache,
		lp="498,337.5",
		pos="e,634.67,234.49 487.75,448.75 485.92,443.91 483.67,437.66 482,432 471.42,396.12 473.81,385.81 463,350 460.78,342.66 456.13,339.62 \
460,333 476.48,304.83 496.44,314.48 524,297 547.95,281.8 551.13,273.64 576,260 592.09,251.18 610.96,243.33 626.74,237.41"];
	Align_Short_Proteins	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 535.5 305.5 535.5 324.5 672.5 324.5 672.5 305.5 ",
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		fillcolor="#F3CEA1",
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		label="Seed Protein Alignments",
		pos="604,315",
		rects="535.5,305.5,672.5,324.5",
		width=1.9028];
	uniColl_asn_cache -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 10 503.59 448.57 513.78 441.03 527.62 429.02 535 415 542.76 400.26 533.35 392.8 541 378 551.29 358.08 570.36 340.71 \
584.83 329.46 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 579 380.6 0 76 17 -uniColl_asn_cache ",
		label=uniColl_asn_cache,
		lp="579,382.5",
		pos="e,591.5,324.44 503.59,448.57 513.78,441.03 527.62,429.02 535,415 542.76,400.26 533.35,392.8 541,378 551.29,358.08 570.36,340.71 \
584.83,329.46"];
	Get_Protein_FASTA	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 296.5 350.5 296.5 369.5 353.5 369.5 353.5 350.5 ",
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		label=getfasta,
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		rects="296.5,350.5,353.5,369.5",
		width=0.79167];
	uniColl_asn_cache -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 10 466.28 448.55 456.35 445.45 444.73 442.16 434 440 383.17 429.77 236.65 453.58 202 415 173.5 383.27 240.88 380.24 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 288.95 373.26 295.29 369.42 287.94 368.47 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 224 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="224,405",
		pos="e,296.77,369.11 466.28,448.55 456.35,445.45 444.73,442.16 434,440 383.17,429.77 236.65,453.58 202,415 173.5,383.27 240.88,380.24 \
288.69,370.81"];
	Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 578 260.5 578 279.5 664 279.5 664 260.5 ",
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		label=align_sort_ma,
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		rects="578,260.5,664,279.5",
		width=1.1944];
	uniColl_asn_cache -> Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 B 19 488.6 448.74 483.27 428.42 472.99 375.77 501 350 513.06 338.9 526.74 354.79 537 342 539.5 338.88 537.49 336.97 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 570.9 282.43 576.79 277.91 569.38 277.77 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 523 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
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		pos="e,578.23,277.44 488.6,448.74 483.27,428.42 472.99,375.77 501,350 513.06,338.9 526.74,354.79 537,342 539.5,338.88 537.49,336.97 537,\
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	Convert_PAF_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 292 260.5 292 279.5 348 279.5 348 260.5 ",
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		height=0.27778,
		label=paf2asn,
		pos="320,270",
		rects="292,260.5,348,279.5",
		width=0.77778];
	uniColl_asn_cache -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 25 467.47 448.52 457.31 445.24 445.21 441.84 434 440 385.29 431.99 258.6 448.3 212 432 173.91 418.68 174.07 397.97 \
139 378 131.04 373.47 125.07 377.63 120 370 115.08 362.59 114.53 357.01 120 350 129.02 338.44 138.61 347.96 152 342 178.92 330.03 \
180.37 317.61 207 305 231.74 293.29 261.43 284.54 284.17 278.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 284.52 281.29 290.74 277.25 283.36 276.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 142 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="142,360",
		pos="e,292.21,276.9 467.47,448.52 457.31,445.24 445.21,441.84 434,440 385.29,431.99 258.6,448.3 212,432 173.91,418.68 174.07,397.97 139,\
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317.61 207,305 231.74,293.29 261.43,284.54 284.17,278.85"];
	Filter_Protein_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 639.5 80.5 639.5 99.5 776.5 99.5 776.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 708 87.5 0 121 25 -Filter Protein Alignments ",
		height=0.27778,
		label="Filter Protein Alignments",
		pos="708,90",
		rects="639.5,80.5,776.5,99.5",
		width=1.9028];
	uniColl_asn_cache -> Filter_Protein_Alignments	[_draw_="c 7 -#000000 B 28 467.75 448.57 457.54 445.27 445.32 441.83 434 440 376.06 430.64 226.28 448.67 170 432 156.04 427.87 152.54 425.04 \
142 415 127.63 401.31 130.07 392.93 117 378 113.47 373.97 111.51 374.04 108 370 77.68 335.15 67.13 324.84 56 280 52.63 266.41 55 \
262.51 55 248.5 55 248.5 55 248.5 55 134 55 105.41 458.87 95.19 631.37 92.13 ",
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		label=uniColl_asn_cache,
		lp="94,270",
		pos="e,639.66,91.989 467.75,448.57 457.54,445.27 445.32,441.83 434,440 376.06,430.64 226.28,448.67 170,432 156.04,427.87 152.54,425.04 \
142,415 127.63,401.31 130.07,392.93 117,378 113.47,373.97 111.51,374.04 108,370 77.675,335.15 67.126,324.84 56,280 52.627,266.41 \
55,262.51 55,248.5 55,248.5 55,248.5 55,134 55,105.41 458.87,95.193 631.37,92.134"];
	Remap_cross_origin_alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 395.5 215.5 395.5 234.5 500.5 234.5 500.5 215.5 ",
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		height=0.27778,
		label=cross_origin_fasta,
		pos="448,225",
		rects="395.5,215.5,500.5,234.5",
		width=1.4583];
	uniColl_asn_cache -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 34 467.47 448.5 457.31 445.22 445.21 441.83 434 440 380.89 431.35 243.9 446.21 192 432 176.84 427.85 173.3 424.78 \
161 415 143.76 401.28 144.63 392.45 128 378 123.16 373.8 119.86 375.11 116 370 108.12 359.57 109.02 354.91 107 342 106.38 338.05 \
104.51 336.13 107 333 116.95 320.52 127.13 330.8 142 325 158.69 318.49 160.86 312.78 177 305 225.7 281.53 238.28 275.74 290 260 \
322.63 250.07 359.9 241.9 390.05 236.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 390.45 238.48 396.86 234.76 389.53 233.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 129 335.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="129,337.5",
		pos="e,398.35,234.48 467.47,448.5 457.31,445.22 445.21,441.83 434,440 380.89,431.35 243.9,446.21 192,432 176.84,427.85 173.3,424.78 161,\
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336.13 107,333 116.95,320.52 127.13,330.8 142,325 158.69,318.49 160.86,312.78 177,305 225.7,281.53 238.28,275.74 290,260 322.63,\
250.07 359.9,241.9 390.05,236.06"];
	Filter_Short_Sequences	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 579 350.5 579 369.5 641 369.5 641 350.5 ",
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		height=0.27778,
		label=seq_filter,
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		width=0.86111];
	uniColl_asn_cache -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 13 521.42 448.57 530.39 444.78 539.52 439.43 546 432 557.27 419.06 543.95 406.13 557 395 577.81 377.26 599.97 407.55 \
618 387 620.52 384.13 620.65 380.47 619.64 376.82 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 621.89 375.84 616.75 370.49 617.44 377.88 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 579 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="579,405",
		pos="e,616.13,369.12 521.42,448.57 530.39,444.78 539.52,439.43 546,432 557.27,419.06 543.95,406.13 557,395 577.81,377.26 599.97,407.55 \
618,387 620.52,384.13 620.65,380.47 619.64,376.82"];
	asn_cache -> Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 B 25 661.87 448.61 668.54 445.43 676.48 442.08 684 440 730.65 427.1 755.34 448.79 790 415 805.8 399.59 806.22 391.55 \
811 370 812.93 361.32 816.35 357.1 811 350 803.21 339.67 792.53 350.76 783 342 770.06 330.1 779.23 319.3 769 305 743.84 269.82 730.24 \
266.6 694 243 691.47 241.35 688.77 239.76 686.02 238.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 687.45 236.22 680.12 235.14 685.18 240.56 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 805 335.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="805,337.5",
		pos="e,678.77,234.44 661.87,448.61 668.54,445.43 676.48,442.08 684,440 730.65,427.1 755.34,448.79 790,415 805.8,399.59 806.22,391.55 \
811,370 812.93,361.32 816.35,357.1 811,350 803.21,339.67 792.53,350.76 783,342 770.06,330.1 779.23,319.3 769,305 743.84,269.82 730.24,\
266.6 694,243 691.47,241.35 688.77,239.76 686.02,238.24"];
	asn_cache -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 13 659.49 448.61 676.55 436.9 702.28 414.87 690 395 685.82 388.24 680.03 392.19 674 387 651.76 367.86 658.01 352.42 \
636 333 634.23 331.44 632.29 329.97 630.28 328.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 631.78 326.65 624.52 325.12 629.24 330.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 696 380.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="696,382.5",
		pos="e,623.23,324.34 659.49,448.61 676.55,436.9 702.28,414.87 690,395 685.82,388.24 680.03,392.19 674,387 651.76,367.86 658.01,352.42 \
636,333 634.23,331.44 632.29,329.97 630.28,328.6"];
	asn_cache -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 13 630.15 448.53 623.49 445.33 615.55 442 608 440 605.64 439.38 435.43 423.2 433 423 419.24 421.89 318.44 425.07 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 315.34 377.86 317.28 370.7 311.3 375.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 331 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="331,405",
		pos="e,318.13,369.45 630.15,448.53 623.49,445.33 615.55,442 608,440 605.64,439.38 435.43,423.2 433,423 419.24,421.89 318.44,425.07 309,\
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	asn_cache -> Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 B 19 662.28 448.55 668.87 445.44 676.65 442.16 684 440 706.86 433.3 715.23 441.67 737 432 768.31 418.1 811.65 406.06 \
792 378 786.03 369.48 776.48 378.14 770 370 751.87 347.23 781.37 326.72 762 305 750.01 291.56 707.4 282.53 672.13 277.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 672.59 274.76 665.31 276.17 671.88 279.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 792 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="792,360",
		pos="e,663.81,275.95 662.28,448.55 668.87,445.44 676.65,442.16 684,440 706.86,433.3 715.23,441.67 737,432 768.31,418.1 811.65,406.06 \
792,378 786.03,369.48 776.48,378.14 770,370 751.87,347.23 781.37,326.72 762,305 750.01,291.56 707.4,282.53 672.13,277.17"];
	asn_cache -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 22 663.62 448.63 671.38 444.38 680.25 438.69 687 432 703.73 415.42 708.53 409.65 715 387 716.1 383.15 717.38 381.22 \
715 378 707.82 368.27 697.3 378.79 689 370 668.57 348.37 695.37 324.61 673 305 671.38 303.58 521.14 288.21 519 288 462.09 282.43 \
395.93 276.98 356.05 273.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 356.39 271.38 349.21 273.27 356 276.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 711 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="711,360",
		pos="e,347.71,273.15 663.62,448.63 671.38,444.38 680.25,438.69 687,432 703.73,415.42 708.53,409.65 715,387 716.1,383.15 717.38,381.22 \
715,378 707.82,368.27 697.3,378.79 689,370 668.57,348.37 695.37,324.61 673,305 671.38,303.58 521.14,288.21 519,288 462.09,282.43 \
395.93,276.98 356.05,273.81"];
	asn_cache -> Filter_Protein_Alignments	[_draw_="c 7 -#000000 B 13 661.45 448.57 668.18 445.3 676.28 441.89 684 440 730.98 428.48 899 454.37 899 406 899 406 899 406 899 134 899 \
109.4 837.93 98.87 784.85 94.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 785.1 91.93 777.92 93.81 784.71 96.81 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 921 268.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="921,270",
		pos="e,776.42,93.694 661.45,448.57 668.18,445.3 676.28,441.89 684,440 730.98,428.48 899,454.37 899,406 899,406 899,406 899,134 899,109.4 \
837.93,98.871 784.85,94.366"];
	asn_cache -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 19 665.98 448.71 675.25 444.41 686.14 438.65 695 432 720.31 413.01 723.72 401.01 730 370 731.76 361.29 733.96 357.96 \
730 350 728.98 347.94 698.19 326.97 697 325 677.81 293.4 710.38 267.85 683 243 683 243 578.38 235.43 508.75 230.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 509.11 227.96 501.96 229.9 508.76 232.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 741 335.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="741,337.5",
		pos="e,500.45,229.79 665.98,448.71 675.25,444.41 686.14,438.65 695,432 720.31,413.01 723.72,401.01 730,370 731.76,361.29 733.96,357.96 \
730,350 728.98,347.94 698.19,326.97 697,325 677.81,293.4 710.38,267.85 683,243 683,243 578.38,235.43 508.75,230.4"];
	Get_Genomic_FASTA	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 357.5 350.5 357.5 369.5 462.5 369.5 462.5 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 410 357.5 0 89 18 -cross_origin_fasta ",
		height=0.27778,
		label=cross_origin_fasta,
		pos="410,360",
		rects="357.5,350.5,462.5,369.5",
		width=1.4583];
	asn_cache -> Get_Genomic_FASTA	[_draw_="c 7 -#000000 B 10 628.86 448.53 622.43 445.57 614.98 442.38 608 440 563.43 424.76 548.79 432.36 505 415 490.2 409.13 453.97 387.75 \
430.78 373.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 432.29 371.77 425.04 370.23 429.75 375.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 527 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="527,405",
		pos="e,423.75,369.45 628.86,448.53 622.43,445.57 614.98,442.38 608,440 563.43,424.76 548.79,432.36 505,415 490.2,409.13 453.97,387.75 \
430.78,373.71"];
	Filter_Protein_Compartments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 644 170.5 644 189.5 712 189.5 712 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 678 177.5 0 52 12 -align_filter ",
		height=0.27778,
		label=align_filter,
		pos="678,180",
		rects="644,170.5,712,189.5",
		width=0.94444];
	asn_cache -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 25 661.47 448.67 668.21 445.41 676.3 442 684 440 735.47 426.65 767.81 456.55 801 415 824.62 385.43 846.32 363.57 \
824 333 817.12 323.58 806.32 334.09 799 325 790.18 314.05 796 307.56 796 293.5 796 293.5 796 293.5 796 224 796 212.03 797.92 205.98 \
789 198 778.89 188.96 747 184.72 719.97 182.74 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 720.43 180.32 713.28 182.3 720.1 185.21 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 821 313.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="821,315",
		pos="e,711.77,182.2 661.47,448.67 668.21,445.41 676.3,442 684,440 735.47,426.65 767.81,456.55 801,415 824.62,385.43 846.32,363.57 824,\
333 817.12,323.58 806.32,334.09 799,325 790.18,314.05 796,307.56 796,293.5 796,293.5 796,293.5 796,224 796,212.03 797.92,205.98 \
789,198 778.89,188.96 747,184.72 719.97,182.74"];
	Sort_Protein_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 675.5 125.5 675.5 144.5 740.5 144.5 740.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 708 132.5 0 49 10 -align_sort ",
		height=0.27778,
		label=align_sort,
		pos="708,135",
		rects="675.5,125.5,740.5,144.5",
		width=0.90278];
	asn_cache -> Sort_Protein_Alignments	[_draw_="c 7 -#000000 B 13 661.46 448.62 668.19 445.36 676.29 441.95 684 440 719.87 430.93 847 443 847 406 847 406 847 406 847 179 847 158.2 \
789.5 146.37 748.46 140.57 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 749 138.18 741.74 139.66 748.35 143.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 869 290.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="869,292.5",
		pos="e,740.24,139.46 661.46,448.62 668.19,445.36 676.29,441.95 684,440 719.87,430.93 847,443 847,406 847,406 847,406 847,179 847,158.2 \
789.5,146.37 748.46,140.57"];
	asn_cache -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 7 646.84 448.76 647.96 433.37 648.29 399.87 633 378 632.29 376.98 631.5 376 630.65 375.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 632.39 373.34 625.56 370.46 629.11 376.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 667 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="667,405",
		pos="e,624.44,369.44 646.84,448.76 647.96,433.37 648.29,399.87 633,378 632.29,376.98 631.5,376 630.65,375.06"];
	Extract_Proteins_From_Compartments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 355 395.5 355 414.5 463 414.5 463 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 409 402.5 0 92 17 -compart_annot2all ",
		height=0.27778,
		label=compart_annot2all,
		pos="409,405",
		rects="355,395.5,463,414.5",
		width=1.5];
	compartments -> Extract_Proteins_From_Compartments	[_draw_="c 7 -#000000 B 7 388.55 448.78 388.49 441.64 389.18 431.19 393 423 393.38 422.19 393.81 421.4 394.28 420.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 396 422.39 398.39 415.37 392.14 419.37 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 405.5 425.6 0 25 6 -aligns ",
		label=aligns,
		lp="405.5,427.5",
		pos="e,399.32,414.18 388.55,448.78 388.49,441.64 389.18,431.19 393,423 393.38,422.19 393.81,421.4 394.28,420.62"];
	compartments -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 22 369.76 448.67 361.13 445.34 350.73 441.85 341 440 316.86 435.4 139.87 446.45 120 432 118.72 431.07 81.28 326.56 \
81 325 79.45 316.25 75.7 312.14 81 305 101.62 277.23 196.76 269.58 230 260 302.63 239.07 319.83 229.53 394 215 479.06 198.34 580.15 \
188.59 635.87 184.07 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 635.79 186.54 642.57 183.54 635.4 181.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 111 313.1 0 60 12 -compartments ",
		label=compartments,
		lp="111,315",
		pos="e,644.08,183.42 369.76,448.67 361.13,445.34 350.73,441.85 341,440 316.86,435.4 139.87,446.45 120,432 118.72,431.07 81.275,326.56 \
81,325 79.454,316.25 75.701,312.14 81,305 101.62,277.23 196.76,269.58 230,260 302.63,239.07 319.83,229.53 394,215 479.06,198.34 \
580.15,188.59 635.87,184.07"];
	all_prots -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 16 564.7 448.6 558.87 445.34 551.82 441.93 545 440 499.97 427.25 485.46 443.15 440 432 430.14 429.58 428.89 425.28 \
419 423 401.22 418.9 267.58 428.21 255 415 239.08 398.28 266.04 382.56 290.99 372.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 291.56 374.85 297.2 370.04 289.79 370.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 265 403.1 0 20 6 -gilist ",
		label=gilist,
		lp="265,405",
		pos="e,298.61,369.49 564.7,448.6 558.87,445.34 551.82,441.93 545,440 499.97,427.25 485.46,443.15 440,432 430.14,429.58 428.89,425.28 \
419,423 401.22,418.9 267.58,428.21 255,415 239.08,398.28 266.04,382.56 290.99,372.44"];
	all_prots -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 22 593.68 448.53 599.36 445.63 605.89 442.49 612 440 620.43 436.57 684.64 422.35 690 415 695.24 407.82 695.24 402.18 \
690 395 683.12 385.58 671.88 396.42 665 387 662.64 383.77 664.08 381.89 665 378 683.63 299.07 789.83 283.86 747 215 740.64 204.77 \
730.2 197.53 719.34 192.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 720.59 190.31 713.19 189.84 718.68 194.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 745.5 313.1 0 61 15 -query_allowlist ",
		label=query_allowlist,
		lp="745.5,315",
		pos="e,711.8,189.25 593.68,448.53 599.36,445.63 605.89,442.49 612,440 620.43,436.57 684.64,422.35 690,415 695.24,407.82 695.24,402.18 \
690,395 683.12,385.58 671.88,396.42 665,387 662.64,383.77 664.08,381.89 665,378 683.63,299.07 789.83,283.86 747,215 740.64,204.77 \
730.2,197.53 719.34,192.44"];
	all_prots -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 13 582.82 448.66 587.7 440.2 595.43 426.72 602 415 606.96 406.15 605.69 402.03 613 395 618.73 389.49 624.82 393.76 \
629 387 631.35 383.2 630.38 379.23 627.93 375.57 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 629.87 374.07 623.34 370.55 626.25 377.37 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 627 403.1 0 28 6 -seqids ",
		label=seqids,
		lp="627,405",
		pos="e,622.32,369.43 582.82,448.66 587.7,440.2 595.43,426.72 602,415 606.96,406.15 605.69,402.03 613,395 618.73,389.49 624.82,393.76 \
629,387 631.35,383.2 630.38,379.23 627.93,375.57"];
	taxon_db -> Compute_Gencode	[_draw_="c 7 -#000000 B 10 169.27 448.58 163.27 445.31 156.01 441.9 149 440 136.21 436.52 39.05 441.68 30 432 26.26 428.01 28.07 423.58 31.95 \
419.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 33.24 421.63 37.05 415.27 30.11 417.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 49 425.6 0 38 8 -taxon_db ",
		label=taxon_db,
		lp="49,427.5",
		pos="e,38.215,414.3 169.27,448.58 163.27,445.31 156.01,441.9 149,440 136.21,436.52 39.051,441.68 30,432 26.265,428.01 28.068,423.58 31.952,\
419.52"];
	blastdb_dir -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 10 727.37 448.88 731.04 444.28 735.09 438.22 737 432 745.39 404.73 766.33 399.02 720 350 717.24 347.08 676.33 335.5 \
643.87 326.66 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 644.68 324.34 637.28 324.87 643.4 329.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 769 380.6 0 46 11 -blastdb_dir ",
		label=blastdb_dir,
		lp="769,382.5",
		pos="e,635.82,324.48 727.37,448.88 731.04,444.28 735.09,438.22 737,432 745.39,404.73 766.33,399.02 720,350 717.24,347.08 676.33,335.5 \
643.87,326.66"];
	genomic_ids -> Get_Genomic_FASTA	[_draw_="c 7 -#000000 B 10 294.9 448.77 284.64 435.85 268.33 410.69 282 395 290.55 385.19 327.38 390.17 340 387 354.58 383.33 370.31 377.66 \
383.16 372.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 383.79 374.93 389.35 370.02 381.94 370.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 292 403.1 0 20 6 -gilist ",
		label=gilist,
		lp="292,405",
		pos="e,390.75,369.45 294.9,448.77 284.64,435.85 268.33,410.69 282,395 290.55,385.19 327.38,390.17 340,387 354.58,383.33 370.31,377.66 \
383.16,372.54"];
	Filter_Full_Coverage_Alignments -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 4 663.47 215.71 665.71 210.36 668.7 203.22 671.38 196.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 673.51 198.06 673.96 190.66 668.99 196.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 681 200.6 0 22 5 -input ",
		label=input,
		lp="681,202.5",
		pos="e,674.54,189.27 663.47,215.71 665.71,210.36 668.7,203.22 671.38,196.81"];
	Align_Short_Proteins -> Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 B 4 607.28 305.71 609.39 300.36 612.22 293.22 614.75 286.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 616.88 288.08 617.18 280.67 612.32 286.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 625 290.6 0 22 5 -input ",
		label=input,
		lp="625,292.5",
		pos="e,617.73,279.27 607.28,305.71 609.39,300.36 612.22,293.22 614.75,286.81"];
	Run_Miniprot_fast	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 209 305.5 209 324.5 267 324.5 267 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 238 312.5 0 42 8 -miniprot ",
		height=0.27778,
		label=miniprot,
		pos="238,315",
		rects="209,305.5,267,324.5",
		width=0.80556];
	Get_Protein_FASTA -> Run_Miniprot_fast	[_draw_="c 7 -#000000 B 10 296.79 350.8 295.51 350.51 294.25 350.24 293 350 277.2 346.92 231.74 354 221 342 217.91 338.55 218.81 334.49 221.36 \
330.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 223.03 332.43 225.81 325.55 219.35 329.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 238 335.6 0 34 8 -proteins ",
		label=proteins,
		lp="238,337.5",
		pos="e,226.81,324.42 296.79,350.8 295.51,350.51 294.25,350.24 293,350 277.2,346.92 231.74,354 221,342 217.91,338.55 218.81,334.49 221.36,\
330.62"];
	Run_Miniprot_slow	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 291 305.5 291 324.5 349 324.5 349 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 320 312.5 0 42 8 -miniprot ",
		height=0.27778,
		label=miniprot,
		pos="320,315",
		rects="291,305.5,349,324.5",
		width=0.80556];
	Get_Protein_FASTA -> Run_Miniprot_slow	[_draw_="c 7 -#000000 B 4 324.04 350.71 323.44 345.59 322.66 338.85 321.94 332.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 324.38 332.44 321.14 325.77 319.51 333 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 339 335.6 0 34 8 -proteins ",
		label=proteins,
		lp="339,337.5",
		pos="e,320.96,324.27 324.04,350.71 323.44,345.59 322.66,338.85 321.94,332.67"];
	Run_Miniprot_fast -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 4 254.2 305.5 266.33 299.14 283.1 290.35 296.67 283.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 297.43 285.6 302.49 280.18 295.16 281.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 293 290.6 0 14 3 -paf ",
		label=paf,
		lp="293,292.5",
		pos="e,303.83,279.48 254.2,305.5 266.33,299.14 283.1,290.35 296.67,283.23"];
	Sort_Short_Protein_Alignments -> Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 B 4 628.52 260.71 633.7 255 640.72 247.26 646.82 240.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 648.6 242.22 651.49 235.39 644.97 238.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 670.5 245.6 0 55 12 -sorted_seeds ",
		label=sorted_seeds,
		lp="670.5,247.5",
		pos="e,652.5,234.27 628.52,260.71 633.7,255 640.72,247.26 646.82,240.54"];
	Convert_PAF_Alignments -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 4 345.29 260.5 365.19 253.82 393.08 244.45 414.78 237.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 415.47 239.51 421.33 234.96 413.91 234.87 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 405.5 245.6 0 21 5 -align ",
		label=align,
		lp="405.5,247.5",
		pos="e,422.76,234.48 345.29,260.5 365.19,253.82 393.08,244.45 414.78,237.16"];
	Extract_Proteins_From_Compartments -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 4 392.4 395.5 379.98 389.14 362.8 380.35 348.9 373.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 350.26 371.18 342.91 370.17 348.02 375.54 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 384 380.6 0 20 6 -gilist ",
		label=gilist,
		lp="384,382.5",
		pos="e,341.56,369.48 392.4,395.5 379.98,389.14 362.8,380.35 348.9,373.23"];
	Extract_Proteins_From_Compartments -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 7 438.29 395.55 457.9 390.08 484.37 383.06 508 378 528.64 373.58 551.85 369.63 570.9 366.66 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 571.02 369.12 577.57 365.63 570.28 364.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 522 380.6 0 28 6 -seqids ",
		label=seqids,
		lp="522,382.5",
		pos="e,579.06,365.4 438.29,395.55 457.9,390.08 484.37,383.06 508,378 528.64,373.58 551.85,369.63 570.9,366.66"];
	Filter_Protein_Alignments -> align	[_draw_="c 7 -#000000 B 4 708 80.71 708 75.59 708 68.85 708 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 710.45 62.78 708 55.78 705.55 62.78 ",
		pos="e,708,54.265 708,80.709 708,75.593 708,68.848 708,62.666"];
	Remap_cross_origin_alignments -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 4 493.44 215.5 534.87 207.76 595.6 196.4 635.94 188.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 636.31 191.29 642.74 187.59 635.41 186.47 ",
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		label=input,
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		pos="e,644.23,187.31 493.44,215.5 534.87,207.76 595.6,196.4 635.94,188.86"];
	Get_Genomic_FASTA -> Run_Miniprot_fast	[_draw_="c 7 -#000000 B 13 379.58 350.51 373.82 348.22 368.03 345.41 363 342 358.57 339 359.74 335.48 355 333 328.82 319.29 318.23 329.35 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 380 335.6 0 34 6 -genome ",
		label=genome,
		lp="380,337.5",
		pos="e,266.82,321.37 379.58,350.51 373.82,348.22 368.03,345.41 363,342 358.57,339 359.74,335.48 355,333 328.82,319.29 318.23,329.35 289,\
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	Get_Genomic_FASTA -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 7 430.25 350.6 433.68 348.3 436.83 345.46 439 342 458.2 311.31 454.93 266.74 451.24 242.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 453.66 242.36 450.06 235.88 448.83 243.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 488 290.6 0 70 16 -delta_seqs_input ",
		label=delta_seqs_input,
		lp="488,292.5",
		pos="e,449.8,234.39 430.25,350.6 433.68,348.3 436.83,345.46 439,342 458.2,311.31 454.93,266.74 451.24,242.77"];
	Get_Genomic_FASTA -> Run_Miniprot_slow	[_draw_="c 7 -#000000 B 7 408.18 350.51 406.51 344.72 403.43 337.36 398 333 386.44 323.72 370.91 319.22 356.76 317.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 357.37 314.74 350.13 316.35 356.79 319.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 421 335.6 0 34 6 -genome ",
		label=genome,
		lp="421,337.5",
		pos="e,348.62,316.17 408.18,350.51 406.51,344.72 403.43,337.36 398,333 386.44,323.72 370.91,319.22 356.76,317.14"];
	Compute_Gencode_int	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 165.5 350.5 165.5 369.5 292.5 369.5 292.5 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 229 357.5 0 111 19 -Compute_Gencode_int ",
		height=0.27778,
		label=Compute_Gencode_int,
		pos="229,360",
		rects="165.5,350.5,292.5,369.5",
		width=1.7639];
	Compute_Gencode_int -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 7 240.78 350.57 250.59 343.74 263.9 334.94 270 333 282.05 329.17 432.43 322.68 527.25 318.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 527.26 321.37 534.16 318.65 527.07 316.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 295.5 335.6 0 51 10 -db_gencode ",
		label=db_gencode,
		lp="295.5,337.5",
		pos="e,535.67,318.59 240.78,350.57 250.59,343.74 263.9,334.94 270,333 282.05,329.17 432.43,322.68 527.25,318.92"];
	Compute_Gencode_int -> Run_Miniprot_fast	[_draw_="c 7 -#000000 B 7 201.57 350.53 192.49 346.22 185.86 340.33 191 333 193.68 329.18 197.3 326.22 201.36 323.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 202.27 326.19 207.64 321.08 200.25 321.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 194 335.6 0 6 1 -T ",
		label=T,
		lp="194,337.5",
		pos="e,209.02,320.45 201.57,350.53 192.49,346.22 185.86,340.33 191,333 193.68,329.18 197.3,326.22 201.36,323.92"];
	Compute_Gencode_int -> Run_Miniprot_slow	[_draw_="c 7 -#000000 B 10 217.87 350.63 212.14 345.32 207.26 338.45 212 333 220.39 323.35 256.37 327 269 325 273.5 324.29 278.21 323.51 \
282.87 322.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 283.2 325.14 289.68 321.53 282.36 320.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 215 335.6 0 6 1 -T ",
		label=T,
		lp="215,337.5",
		pos="e,291.17,321.27 217.87,350.63 212.14,345.32 207.26,338.45 212,333 220.39,323.35 256.37,327 269,325 273.5,324.29 278.21,323.51 282.87,\
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	Filter_Protein_Compartments -> Sort_Protein_Alignments	[_draw_="c 7 -#000000 B 4 683.78 170.71 687.69 165.12 692.94 157.58 697.57 150.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 699.37 152.65 701.37 145.51 695.35 149.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 706 155.6 0 22 5 -input ",
		label=input,
		lp="706,157.5",
		pos="e,702.23,144.27 683.78,170.71 687.69,165.12 692.94,157.58 697.57,150.96"];
	Sort_Protein_Alignments -> Filter_Protein_Alignments	[_draw_="c 7 -#000000 B 4 708 125.71 708 120.59 708 113.85 708 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 710.45 107.78 708 100.78 705.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 720.5 110.6 0 25 7 -file_in ",
		label=file_in,
		lp="720.5,112.5",
		pos="e,708,99.265 708,125.71 708,120.59 708,113.85 708,107.67"];
	Run_Miniprot_slow -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 4 320 305.71 320 300.59 320 293.85 320 287.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 322.45 287.78 320 280.78 317.55 287.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 327 290.6 0 14 3 -paf ",
		label=paf,
		lp="327,292.5",
		pos="e,320,279.27 320,305.71 320,300.59 320,293.85 320,287.67"];
	Filter_Short_Sequences -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 4 608.84 350.71 608.13 345.59 607.19 338.85 606.33 332.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 608.76 332.36 605.36 325.76 603.9 333.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 621 335.6 0 28 6 -seqids ",
		label=seqids,
		lp="621,337.5",
		pos="e,605.15,324.27 608.84,350.71 608.13,345.59 607.19,338.85 606.33,332.67"];
	Compute_Gencode -> Compute_Gencode_int	[_draw_="c 7 -#000000 B 4 87.77 395.5 115.98 388.61 155.86 378.87 186.06 371.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 186.61 373.88 192.83 369.84 185.45 369.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 167 380.6 0 22 5 -input ",
		label=input,
		lp="167,382.5",
		pos="e,194.3,369.48 87.772,395.5 115.98,388.61 155.86,378.87 186.06,371.49"];
}