digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 413 654 413 654 0 ",
		bb="0,0,654,413",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 209 350 209 405 626 405 626 350 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 259 393 0 84 15 -Workflow Inputs ",
			bb="209,350,626,405",
			label="Workflow Inputs",
			lheight=0.15,
			lp="259,395.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		taxon_db	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 217.5 358.5 217.5 377.5 278.5 377.5 278.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 248 365.5 0 45 8 -taxon_db ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=taxon_db,
			pos="248,368",
			rects="217.5,358.5,278.5,377.5",
			width=0.84722];
		taxid	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 282.5 358.5 282.5 377.5 323.5 377.5 323.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 303 365.5 0 25 5 -taxid ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=taxid,
			pos="303,368",
			rects="282.5,358.5,323.5,377.5",
			width=0.56944];
		scatter_gather_nchunks	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 360.5 358.5 360.5 377.5 493.5 377.5 493.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 427 365.5 0 117 22 -scatter_gather_nchunks ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=scatter_gather_nchunks,
			pos="427,368",
			rects="360.5,358.5,493.5,377.5",
			width=1.8472];
		go	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 327.5 358.5 327.5 377.5 356.5 377.5 356.5 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 342 365.5 0 13 2 -go ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=go,
			pos="342,368",
			rects="327.5,358.5,356.5,377.5",
			width=0.40278];
		asn_cache	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 550 358.5 550 377.5 618 377.5 618 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 584 365.5 0 52 9 -asn_cache ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=asn_cache,
			pos="584,368",
			rects="550,358.5,618,377.5",
			width=0.94444];
		seqids	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 498 358.5 498 377.5 546 377.5 546 358.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 522 365.5 0 32 6 -seqids ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=seqids,
			pos="522,368",
			rects="498,358.5,546,377.5",
			width=0.66667];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 333 8 333 63 441 63 441 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 387 15 0 92 16 -Workflow Outputs ",
			bb="333,8,441,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="387,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		annots	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 362 35.5 362 54.5 412 54.5 412 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 387 42.5 0 34 6 -annots ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=annots,
			pos="387,45",
			rects="362,35.5,412,54.5",
			width=0.69444];
	}
	Run_scan_and_dump	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 273 170.5 273 189.5 501 189.5 501 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 387 177.5 0 212 37 -trnascan_wnode and gpx_qdump combined ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="trnascan_wnode and gpx_qdump combined",
		pos="387,180",
		rects="273,170.5,501,189.5",
		width=3.1667];
	taxon_db -> Run_scan_and_dump	[_draw_="c 7 -#000000 B 10 217.59 367.06 151.37 366.36 0 359.96 0 316 0 316 0 316 0 224 0 196.94 151.4 186.91 264.8 183.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 264.81 185.64 271.73 182.97 264.65 180.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 19 268.1 0 38 8 -taxon_db ",
		label=taxon_db,
		lp="19,270",
		pos="e,273.24,182.92 217.59,367.06 151.37,366.36 0,359.96 0,316 0,316 0,316 0,224 0,196.94 151.4,186.91 264.8,183.19"];
	Compute_Gencode_for_trna	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 274 305.5 274 324.5 380 324.5 380 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 327 312.5 0 90 15 -compute_gencode ",
		height=0.27778,
		label=compute_gencode,
		pos="327,315",
		rects="274,305.5,380,324.5",
		width=1.4722];
	taxon_db -> Compute_Gencode_for_trna	[_draw_="c 7 -#000000 B 7 247.09 358.6 246.75 350.93 247.57 339.79 254 333 257.64 329.16 261.97 326.1 266.67 323.69 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 267.48 326.01 272.94 321 265.54 321.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 273 335.6 0 38 8 -taxon_db ",
		label=taxon_db,
		lp="273,337.5",
		pos="e,274.33,320.4 247.09,358.6 246.75,350.93 247.57,339.79 254,333 257.64,329.16 261.97,326.1 266.67,323.69"];
	Compute_Superkingdom_for_trna	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 150 305.5 150 324.5 256 324.5 256 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 203 312.5 0 90 15 -compute_gencode ",
		height=0.27778,
		label=compute_gencode,
		pos="203,315",
		rects="150,305.5,256,324.5",
		width=1.4722];
	taxon_db -> Compute_Superkingdom_for_trna	[_draw_="c 7 -#000000 B 7 226.89 358.66 219.48 354.69 211.81 349.21 207 342 205.17 339.25 204.05 335.99 203.4 332.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 205.85 332.6 202.7 325.88 200.97 333.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 226 335.6 0 38 8 -taxon_db ",
		label=taxon_db,
		lp="226,337.5",
		pos="e,202.54,324.38 226.89,358.66 219.48,354.69 211.81,349.21 207,342 205.17,339.25 204.05,335.99 203.4,332.71"];
	taxid -> Run_scan_and_dump	[_draw_="c 7 -#000000 B 16 313.83 358.76 318.1 355.75 323.14 352.48 328 350 367.57 329.8 422 360.43 422 316 422 316 422 316 422 224 422 212.03 \
422.19 207.57 415 198 414.13 196.84 413.16 195.75 412.11 194.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 413.69 192.84 406.69 190.4 410.64 196.67 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 432.5 268.1 0 21 5 -taxid ",
		label=taxid,
		lp="432.5,270",
		pos="e,405.5,189.46 313.83,358.76 318.1,355.75 323.14,352.48 328,350 367.57,329.8 422,360.43 422,316 422,316 422,316 422,224 422,212.03 \
422.19,207.57 415,198 414.13,196.84 413.16,195.75 412.11,194.71"];
	taxid -> Compute_Gencode_for_trna	[_draw_="c 7 -#000000 B 7 309.23 358.54 312.48 353.84 316.31 347.8 319 342 320.39 339 321.62 335.69 322.67 332.46 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 324.99 333.27 324.61 325.86 320.29 331.89 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 332.5 335.6 0 21 5 -taxid ",
		label=taxid,
		lp="332.5,337.5",
		pos="e,325.03,324.41 309.23,358.54 312.48,353.84 316.31,347.8 319,342 320.39,339 321.62,335.69 322.67,332.46"];
	taxid -> Compute_Superkingdom_for_trna	[_draw_="c 7 -#000000 B 7 301.84 358.68 300.3 350.85 296.79 339.4 289 333 284.5 329.31 275.03 326.3 263.94 323.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 264.46 321.51 257.12 322.56 263.51 326.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 306.5 335.6 0 21 5 -taxid ",
		label=taxid,
		lp="306.5,337.5",
		pos="e,255.63,322.27 301.84,358.68 300.3,350.85 296.79,339.4 289,333 284.5,329.31 275.03,326.3 263.94,323.91"];
	split_jobs	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 447 260.5 447 279.5 547 279.5 547 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 497 267.5 0 84 17 -cwl split wrapper ",
		height=0.27778,
		label="cwl split wrapper",
		pos="497,270",
		rects="447,260.5,547,279.5",
		width=1.3889];
	scatter_gather_nchunks -> split_jobs	[_draw_="c 7 -#000000 B 7 427.15 358.93 427.56 344.18 429.13 313.61 435 305 441.63 295.29 451.97 288.09 462.32 282.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 463.1 285.21 468.44 280.06 461.05 280.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 452.5 313.1 0 35 7 -nchunks ",
		label=nchunks,
		lp="452.5,315",
		pos="e,469.81,279.42 427.15,358.93 427.56,344.18 429.13,313.61 435,305 441.63,295.29 451.97,288.09 462.32,282.87"];
	asn_cache -> Run_scan_and_dump	[_draw_="c 7 -#000000 B 13 591.57 358.75 595.47 354.12 600.02 348.07 603 342 608.27 331.26 610 327.97 610 316 610 316 610 316 610 224 610 \
200.37 561.13 189.45 509.15 184.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 509.48 182.07 502.29 183.89 509.05 186.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 632 268.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="632,270",
		pos="e,500.79,183.76 591.57,358.75 595.47,354.12 600.02,348.07 603,342 608.27,331.26 610,327.97 610,316 610,316 610,316 610,224 610,200.37 \
561.13,189.45 509.15,184.5"];
	Run_tRNAScan_submit	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 472 305.5 472 324.5 598 324.5 598 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 535 312.5 0 110 21 -Run tRNAScan, scatter ",
		height=0.27778,
		label="Run tRNAScan, scatter",
		pos="535,315",
		rects="472,305.5,598,324.5",
		width=1.75];
	asn_cache -> Run_tRNAScan_submit	[_draw_="c 7 -#000000 B 4 575.91 358.58 568.56 350.93 557.56 339.48 548.82 330.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 550.61 328.71 543.99 325.36 547.07 332.1 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 581 335.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="581,337.5",
		pos="e,542.94,324.26 575.91,358.58 568.56,350.93 557.56,339.48 548.82,330.39"];
	seqids -> Run_tRNAScan_submit	[_draw_="c 7 -#000000 B 7 521.72 358.69 521.73 351.68 522.29 341.47 525 333 525.12 332.62 525.25 332.25 525.39 331.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 527.56 333.02 528.46 325.65 523.16 330.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 539 335.6 0 28 6 -seqids ",
		label=seqids,
		lp="539,337.5",
		pos="e,529.13,324.3 521.72,358.69 521.73,351.68 522.29,341.47 525,333 525.12,332.62 525.25,332.25 525.39,331.87"];
	collect_intermediate	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 335 125.5 335 144.5 439 144.5 439 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 387 132.5 0 88 18 -file concatenation ",
		height=0.27778,
		label="file concatenation",
		pos="387,135",
		rects="335,125.5,439,144.5",
		width=1.4444];
	Run_tRNAScan_trnascan_dump	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 317 80.5 317 99.5 457 99.5 457 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 387 87.5 0 124 23 -Run tRNAScan, transform ",
		height=0.27778,
		label="Run tRNAScan, transform",
		pos="387,90",
		rects="317,80.5,457,99.5",
		width=1.9444];
	collect_intermediate -> Run_tRNAScan_trnascan_dump	[_draw_="c 7 -#000000 B 4 387 125.71 387 120.59 387 113.85 387 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 389.45 107.78 387 100.78 384.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 398 110.6 0 22 5 -input ",
		label=input,
		lp="398,112.5",
		pos="e,387,99.265 387,125.71 387,120.59 387,113.85 387,107.67"];
	split_jobs -> Run_scan_and_dump	[_draw_="c 7 -#000000 B 7 490.36 260.54 478.68 246.1 453.08 216.46 426 198 423.33 196.18 420.43 194.49 417.47 192.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 418.76 190.83 411.39 190 416.63 195.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 488.5 223.1 0 43 10 -input_jobs ",
		label=input_jobs,
		lp="488.5,225",
		pos="e,410.03,189.34 490.36,260.54 478.68,246.1 453.08,216.46 426,198 423.33,196.18 420.43,194.49 417.47,192.93"];
	Run_scan_and_dump -> collect_intermediate	[_draw_="c 7 -#000000 B 4 387 170.71 387 165.59 387 158.85 387 152.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 389.45 152.78 387 145.78 384.55 152.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 401.5 155.6 0 29 8 -files_in ",
		label=files_in,
		lp="401.5,157.5",
		pos="e,387,144.27 387,170.71 387,165.59 387,158.85 387,152.67"];
	Run_tRNAScan_trnascan_dump -> annots	[_draw_="c 7 -#000000 B 4 387 80.71 387 75.59 387 68.85 387 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 389.45 62.78 387 55.78 384.55 62.78 ",
		pos="e,387,54.265 387,80.709 387,75.593 387,68.848 387,62.666"];
	Run_tRNAScan_submit -> split_jobs	[_draw_="c 7 -#000000 B 4 527.67 305.71 522.63 300 515.79 292.26 509.85 285.54 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 511.78 284.02 505.31 280.4 508.11 287.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 530 290.6 0 22 5 -input ",
		label=input,
		lp="530,292.5",
		pos="e,504.3,279.27 527.67,305.71 522.63,300 515.79,292.26 509.85,285.54"];
	Compute_Gencode_int_for_trna	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 244 260.5 244 279.5 414 279.5 414 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 329 267.5 0 154 28 -Compute_Gencode_int_for_trna ",
		height=0.27778,
		label=Compute_Gencode_int_for_trna,
		pos="329,270",
		rects="244,260.5,414,279.5",
		width=2.3611];
	Compute_Gencode_for_trna -> Compute_Gencode_int_for_trna	[_draw_="c 7 -#000000 B 4 327.39 305.71 327.62 300.59 327.94 293.85 328.22 287.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 330.67 287.88 328.55 280.78 325.77 287.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 339 290.6 0 22 5 -input ",
		label=input,
		lp="339,292.5",
		pos="e,328.62,279.27 327.39,305.71 327.62,300.59 327.94,293.85 328.22,287.67"];
	Get_TRNA_model	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 296 215.5 296 234.5 398 234.5 398 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 347 222.5 0 86 14 -Get_TRNA_model ",
		height=0.27778,
		label=Get_TRNA_model,
		pos="347,225",
		rects="296,215.5,398,234.5",
		width=1.4167];
	Compute_Gencode_int_for_trna -> Get_TRNA_model	[_draw_="c 7 -#000000 B 4 332.47 260.71 334.71 255.36 337.7 248.22 340.38 241.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 342.51 243.06 342.96 235.66 337.99 241.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 357.5 245.6 0 37 7 -gencode ",
		label=gencode,
		lp="357.5,247.5",
		pos="e,343.54,234.27 332.47,260.71 334.71,255.36 337.7,248.22 340.38,241.81"];
	Get_TRNA_model -> Run_scan_and_dump	[_draw_="c 7 -#000000 B 7 348.7 215.5 350.15 210.01 352.71 202.98 357 198 358.08 196.74 359.29 195.56 360.57 194.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 361.99 196.44 366.23 190.36 359.12 192.47 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 387.5 200.6 0 61 13 -gcode_othmito ",
		label=gcode_othmito,
		lp="387.5,202.5",
		pos="e,367.46,189.47 348.7,215.5 350.15,210.01 352.71,202.98 357,198 358.08,196.74 359.29,195.56 360.57,194.44"];
	Compute_Superkingdom_int_for_trna	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 42 260.5 42 279.5 240 279.5 240 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 141 267.5 0 182 33 -Compute_Superkingdom_int_for_trna ",
		height=0.27778,
		label=Compute_Superkingdom_int_for_trna,
		pos="141,270",
		rects="42,260.5,240,279.5",
		width=2.75];
	Compute_Superkingdom_int_for_trna -> Run_scan_and_dump	[_draw_="c 7 -#000000 B 7 152.87 260.6 170.15 248.74 203.6 227.21 235 215 262.87 204.17 295.03 196.35 322.56 190.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 322.67 193.43 329.09 189.72 321.75 188.62 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 264.5 223.1 0 59 12 -superkingdom ",
		label=superkingdom,
		lp="264.5,225",
		pos="e,330.57,189.44 152.87,260.6 170.15,248.74 203.6,227.21 235,215 262.87,204.17 295.03,196.35 322.56,190.96"];
	Compute_Superkingdom_for_trna -> Compute_Superkingdom_int_for_trna	[_draw_="c 7 -#000000 B 4 190.75 305.5 182 299.44 170.07 291.16 160.08 284.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 161.62 282.32 154.47 280.34 158.82 286.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 189 290.6 0 22 5 -input ",
		label=input,
		lp="189,292.5",
		pos="e,153.22,279.48 190.75,305.5 182,299.44 170.07,291.16 160.08,284.23"];
}