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	Extract_ab_initio_Proteins	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 0 602.5 0 621.5 91 621.5 91 602.5 ",
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		rects="0,602.5,91,621.5",
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	models1 -> Extract_ab_initio_Proteins	[_draw_="c 7 -#000000 B 10 797.09 621.34 781.53 634.6 750.7 658.27 719.5 667.25 653.19 686.34 161.97 694.32 98.5 667.25 79.93 659.33 64.74 \
641.36 55.46 628.06 ",
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		label=input,
		lp="406.5,680.5",
		pos="e,50.921,621.24 797.09,621.34 781.53,634.6 750.7,658.27 719.5,667.25 653.19,686.34 161.97,694.32 98.5,667.25 79.931,659.33 64.741,\
641.36 55.456,628.06"];
	naming_sqlite -> Find_Best_Evidence_Alignments	[_draw_="c 7 -#000000 B 16 1951.69 602.6 1943.25 599.25 1933.06 595.77 1923.5 594 1880.01 585.93 1566.52 602.54 1525.5 586 1510.48 579.94 \
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		label=unicoll_sqlite,
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1418.5,487 1361.5,442.24 1346.6,430.77 1282.5,397 1278.9,395.13 1275.1,393.33 1271.3,391.64"];
	Assign_Naming_HMM_to_Proteins	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1289 99.5 1289 118.5 1368 118.5 1368 99.5 ",
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		height=0.27778,
		label=assign_hmm,
		pos="1328.5,109",
		rects="1289,99.5,1368,118.5",
		width=1.0972];
	naming_sqlite -> Assign_Naming_HMM_to_Proteins	[_draw_="c 7 -#000000 B 19 1951.68 602.63 1943.24 599.29 1933.05 595.81 1923.5 594 1891.06 587.86 1657.92 596.14 1626.5 586 1608.06 580.05 \
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123.69 ",
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		label=db,
		lp="1558,356.5",
		pos="e,1338.8,118.36 1951.7,602.63 1943.2,599.29 1933,595.81 1923.5,594 1891.1,587.86 1657.9,596.14 1626.5,586 1608.1,580.05 1591.5,579.38 \
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	naming_sqlite -> Run_GeneMark_Post	[_draw_="c 7 -#000000 B 19 1951.68 602.62 1943.24 599.27 1933.05 595.79 1923.5 594 1850.09 580.23 1660.34 602.49 1587.5 586 1559.95 579.76 \
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289.31 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1556.5 444.6 0 54 14 -unicoll_sqlite ",
		label=unicoll_sqlite,
		lp="1556.5,446.5",
		pos="e,1083.4,289.35 1951.7,602.62 1943.2,599.27 1933.1,595.79 1923.5,594 1850.1,580.23 1660.3,602.49 1587.5,586 1559.9,579.76 1529.5,\
588.25 1529.5,560 1529.5,560 1529.5,560 1529.5,333 1529.5,281.9 1468.1,313.95 1417.5,307 1302.2,291.18 1165.6,289.08 1091.6,289.31"];
	Search_Naming_HMMs	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 409 144.5 409 163.5 538 163.5 538 144.5 ",
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		fillcolor="#F3CEA1",
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		label=Search_Naming_HMMs,
		pos="473.5,154",
		rects="409,144.5,538,163.5",
		width=1.7917];
	hmms_tab -> Search_Naming_HMMs	[_draw_="c 7 -#000000 B 13 298.39 602.65 305.05 599.48 312.99 596.12 320.5 594 333.66 590.28 371.76 595.59 381.5 586 398.87 568.9 408.42 \
392.84 413.5 369 429.43 294.2 456.66 206.95 468.14 171.36 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 435 377.1 0 43 8 -hmms_tab ",
		label=hmms_tab,
		lp="435,379",
		pos="e,470.71,163.47 298.39,602.65 305.05,599.48 312.99,596.12 320.5,594 333.66,590.28 371.76,595.59 381.5,586 398.87,568.9 408.42,392.84 \
413.5,369 429.43,294.2 456.66,206.95 468.14,171.36"];
	thresholds -> Find_Best_Evidence_Alignments	[_draw_="c 7 -#000000 B 13 1272.63 602.57 1257.01 595.57 1237.27 586.66 1236.5 586 1226.02 577.01 1219.5 573.81 1219.5 560 1219.5 560 1219.5 \
560 1219.5 423 1219.5 412.95 1224.19 402.8 1229.14 394.88 ",
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		label=thr,
		lp="1225.5,491.5",
		pos="e,1233.6,388.31 1272.6,602.57 1257,595.57 1237.3,586.66 1236.5,586 1226,577.01 1219.5,573.81 1219.5,560 1219.5,560 1219.5,560 1219.5,\
423 1219.5,412.95 1224.2,402.8 1229.1,394.88"];
	Run_GeneMark	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1041.5 324.5 1041.5 343.5 1107.5 343.5 1107.5 324.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1074.5 331.5 0 50 8 -genemark ",
		height=0.27778,
		label=genemark,
		pos="1074.5,334",
		rects="1041.5,324.5,1107.5,343.5",
		width=0.91667];
	thresholds -> Run_GeneMark	[_draw_="c 7 -#000000 B 13 1274.32 602.65 1267.88 599.7 1260.44 596.49 1253.5 594 1240.92 589.48 1234.28 595.12 1224.5 586 1181.67 546.08 \
1217.71 510.3 1189.5 459 1163.9 412.44 1117.02 369.74 1091.74 348.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1093.36 346.87 1086.39 344.33 1090.25 350.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1203.5 467.1 0 12 3 -thr ",
		label=thr,
		lp="1203.5,469",
		pos="e,1085.2,343.37 1274.3,602.65 1267.9,599.7 1260.4,596.49 1253.5,594 1240.9,589.48 1234.3,595.12 1224.5,586 1181.7,546.08 1217.7,\
510.3 1189.5,459 1163.9,412.44 1117,369.74 1091.7,348.71"];
	naming_hmms_combined -> Search_Naming_HMMs	[_draw_="c 7 -#000000 B 16 2056.83 602.55 2043.75 599.44 2028.49 596.15 2014.5 594 1969.1 587.02 1602.5 605.93 1602.5 560 1602.5 560 1602.5 \
560 1602.5 468 1602.5 397.03 1591.44 364.98 1533.5 324 1373.13 210.59 758.09 169.36 545.94 158.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 546.28 155.9 539.17 157.99 546.03 160.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1613 377.1 0 43 8 -hmm_path ",
		label=hmm_path,
		lp="1613,379",
		pos="e,537.66,157.91 2056.8,602.55 2043.8,599.44 2028.5,596.15 2014.5,594 1969.1,587.02 1602.5,605.93 1602.5,560 1602.5,560 1602.5,560 \
1602.5,468 1602.5,397.03 1591.4,364.98 1533.5,324 1373.1,210.59 758.09,169.36 545.94,158.34"];
	Search_ab_initio_for_AntiFam	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 407 549.5 407 568.5 568 568.5 568 549.5 ",
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		fillcolor="#F3CEA1",
		height=0.27778,
		label=Search_ab_initio_for_AntiFam,
		pos="487.5,559",
		rects="407,549.5,568,568.5",
		width=2.2361];
	scatter_gather_nchunks -> Search_ab_initio_for_AntiFam	[_draw_="c 7 -#000000 B 7 392.94 602.64 399.2 593.14 408.95 578.7 411.5 577 414.56 574.96 417.82 573.16 421.21 571.58 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 460.5 579.6 0 98 22 -scatter_gather_nchunks ",
		label=scatter_gather_nchunks,
		lp="460.5,581.5",
		pos="e,428.82,568.44 392.94,602.64 399.2,593.14 408.95,578.7 411.5,577 414.56,574.96 417.82,573.16 421.21,571.58"];
	scatter_gather_nchunks -> Search_Naming_HMMs	[_draw_="c 7 -#000000 B 10 390.05 602.57 393.67 590.63 400.52 568.13 406.5 549 428.77 477.76 443.52 462.32 457.5 389 472.83 308.61 473.95 \
210.23 473.72 171.65 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 509.5 377.1 0 98 22 -scatter_gather_nchunks ",
		label=scatter_gather_nchunks,
		lp="509.5,379",
		pos="e,473.65,163.17 390.05,602.57 393.67,590.63 400.52,568.13 406.5,549 428.77,477.76 443.52,462.32 457.5,389 472.83,308.61 473.95,210.23 \
473.72,171.65"];
	uniColl_cache -> Find_Best_Evidence_Alignments	[_draw_="c 7 -#000000 B 13 595.34 602.52 603.34 599.41 612.73 596.13 621.5 594 651.74 586.67 899.5 591.12 899.5 560 899.5 560 899.5 560 899.5 \
423 899.5 398.08 1044.71 387.37 1145.61 382.94 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 921.5 489.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="921.5,491.5",
		pos="e,1154,382.58 595.34,602.52 603.34,599.41 612.73,596.13 621.5,594 651.74,586.67 899.5,591.12 899.5,560 899.5,560 899.5,560 899.5,\
423 899.5,398.08 1044.7,387.37 1145.6,382.94"];
	uniColl_cache -> Run_GeneMark_Post	[_draw_="c 7 -#000000 B 22 575.5 602.7 575.5 592.6 575.5 575.05 575.5 560 575.5 560 575.5 560 575.5 468 575.5 453.95 585.13 453.29 593.5 \
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		label=asn_cache,
		lp="615.5,446.5",
		pos="e,991.55,289.96 575.5,602.7 575.5,592.6 575.5,575.05 575.5,560 575.5,560 575.5,560 575.5,468 575.5,453.95 585.13,453.29 593.5,442 \
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290.47 983.5,290"];
	uniColl_cache -> Run_GeneMark	[_draw_="c 7 -#000000 B 13 579 602.67 587.75 581.85 611.25 525.84 630.5 479 637.25 462.59 633.71 455.26 645.5 442 682.31 400.61 802.04 365.78 \
864.5 352 922.14 339.28 990.56 335.84 1033.27 335.04 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 657.5 467.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="657.5,469",
		pos="e,1041.7,334.91 579,602.67 587.75,581.85 611.25,525.84 630.5,479 637.25,462.59 633.71,455.26 645.5,442 682.31,400.61 802.04,365.78 \
864.5,352 922.14,339.28 990.56,335.84 1033.3,335.04"];
	sequence_cache -> Find_Best_Evidence_Alignments	[_draw_="c 7 -#000000 B 22 692.34 602.55 701.78 599.28 713.04 595.88 723.5 594 762.91 586.93 865.98 599.97 903.5 586 933.75 574.74 939.59 \
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442 1082.42 414.23 1132.15 398.68 1172.15 390.09 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1012.5 489.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="1012.5,491.5",
		pos="e,1180.3,388.42 692.34,602.55 701.78,599.28 713.04,595.88 723.5,594 762.91,586.93 865.98,599.97 903.5,586 933.75,574.74 939.59,565.59 \
960.5,541 978.29,520.09 968.85,503.88 990.5,487 1001.4,478.52 1009.3,487 1020.5,479 1036.7,467.49 1029.6,453.93 1045.5,442 1082.4,\
414.23 1132.1,398.68 1172.1,390.09"];
	sequence_cache -> Search_ab_initio_for_AntiFam	[_draw_="c 7 -#000000 B 7 645.46 602.52 636.93 599.71 627.33 596.63 618.5 594 589.55 585.37 556.63 576.83 531.03 570.47 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 611.5 579.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="611.5,581.5",
		pos="e,523,568.48 645.46,602.52 636.93,599.71 627.33,596.63 618.5,594 589.55,585.37 556.63,576.83 531.03,570.47"];
	sequence_cache -> Search_Naming_HMMs	[_draw_="c 7 -#000000 B 10 668.27 602.56 660.37 572.74 633.46 472.57 620.5 442 577.47 340.49 544.1 326.38 498.5 226 490.27 207.87 482.98 \
186.17 478.42 171.57 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 616.5 377.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="616.5,379",
		pos="e,475.96,163.49 668.27,602.56 660.37,572.74 633.46,472.57 620.5,442 577.47,340.49 544.1,326.38 498.5,226 490.27,207.87 482.98,186.17 \
478.42,171.57"];
	sequence_cache -> Run_GeneMark_Post	[_draw_="c 7 -#000000 B 22 687.43 602.59 701.93 594.05 720.5 579.34 720.5 560 720.5 560 720.5 560 720.5 468 720.5 455.91 720.31 451.23 712.5 \
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882.44 293.48 983.4 290.96 ",
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		label=asn_cache,
		lp="739.5,446.5",
		pos="e,991.65,290.76 687.43,602.59 701.93,594.05 720.5,579.34 720.5,560 720.5,560 720.5,560 720.5,468 720.5,455.91 720.31,451.23 712.5,\
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	sequence_cache -> Run_GeneMark	[_draw_="c 7 -#000000 B 13 690.29 602.56 700.63 597.96 713.42 592 724.5 586 779.73 556.07 830.5 555.32 830.5 492.5 830.5 492.5 830.5 492.5 \
830.5 378 830.5 357.64 963.92 343.88 1033.44 338.09 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 852.5 467.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="852.5,469",
		pos="e,1041.6,337.42 690.29,602.56 700.63,597.96 713.42,592 724.5,586 779.73,556.07 830.5,555.32 830.5,492.5 830.5,492.5 830.5,492.5 \
830.5,378 830.5,357.64 963.92,343.88 1033.4,338.09"];
	prot_aligns -> Find_Best_Evidence_Alignments	[_draw_="c 7 -#000000 B 13 1489.08 602.59 1475.19 599.84 1459.69 596.78 1445.5 594 1406.62 586.38 1270.5 599.62 1270.5 560 1270.5 560 1270.5 \
560 1270.5 423 1270.5 412.05 1263.87 401.89 1256.85 394.2 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1281 489.6 0 21 5 -align ",
		label=align,
		lp="1281,491.5",
		pos="e,1251,388.36 1489.1,602.59 1475.2,599.84 1459.7,596.78 1445.5,594 1406.6,586.38 1270.5,599.62 1270.5,560 1270.5,560 1270.5,560 \
1270.5,423 1270.5,412.05 1263.9,401.89 1256.8,394.2"];
	hmm_params -> Run_GeneMark	[_draw_="c 7 -#000000 B 10 1036.29 602.71 1037.18 592.62 1038.5 575.08 1038.5 560 1038.5 560 1038.5 560 1038.5 468 1038.5 424.56 1056.61 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1066 467.1 0 55 10 -hmm_params ",
		label=hmm_params,
		lp="1066,469",
		pos="e,1070.5,343.5 1036.3,602.71 1037.2,592.62 1038.5,575.08 1038.5,560 1038.5,560 1038.5,560 1038.5,468 1038.5,424.56 1056.6,375.83 \
1067.1,351.17"];
	raw_seqs -> Run_GeneMark	[_draw_="c 7 -#000000 B 13 1214.63 602.89 1210.64 598.3 1206.1 592.24 1203.5 586 1186.39 544.99 1220.23 519.1 1189.5 487 1176.06 472.96 1162.03 \
490.7 1146.5 479 1145.08 477.93 1100.38 387.48 1082.14 350.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1084.44 349.63 1079.15 344.44 1080.05 351.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1169.5 467.1 0 46 9 -sequences ",
		label=sequences,
		lp="1169.5,469",
		pos="e,1078.5,343.08 1214.6,602.89 1210.6,598.3 1206.1,592.24 1203.5,586 1186.4,544.99 1220.2,519.1 1189.5,487 1176.1,472.96 1162,490.7 \
1146.5,479 1145.1,477.93 1100.4,387.48 1082.1,350.49"];
	selenoproteins_db -> Find_Best_Evidence_Alignments	[_draw_="c 7 -#000000 B 7 1131.9 602.83 1124.83 579.04 1107.42 508.42 1132.5 459 1148.89 426.71 1185.36 404.45 1211.38 391.98 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1160.5 489.6 0 76 17 -selenoproteins_db ",
		label=selenoproteins_db,
		lp="1160.5,491.5",
		pos="e,1219.1,388.43 1131.9,602.83 1124.8,579.04 1107.4,508.42 1132.5,459 1148.9,426.71 1185.4,404.45 1211.4,391.98"];
	selenoproteins_db -> Run_GeneMark_Post	[_draw_="c 7 -#000000 B 16 1124.48 602.74 1114.45 593.47 1100.5 577.45 1100.5 560 1100.5 560 1100.5 560 1100.5 490.5 1100.5 476.16 1103.82 \
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1088.5 444.6 0 76 17 -selenoproteins_db ",
		label=selenoproteins_db,
		lp="1088.5,446.5",
		pos="e,1035,298.39 1124.5,602.74 1114.5,593.47 1100.5,577.45 1100.5,560 1100.5,560 1100.5,560 1100.5,490.5 1100.5,476.16 1103.8,468.96 \
1093.5,459 1079.5,445.5 1063.7,465.29 1050.5,451 1013.5,410.87 1025.3,338.66 1033,306.37"];
	annotation -> Find_Best_Evidence_Alignments	[_draw_="c 7 -#000000 B 19 1675.17 602.52 1656.02 599.42 1633.77 596.16 1613.5 594 1598.45 592.4 1489.7 594.97 1477.5 586 1463.33 575.59 \
1476.18 561.18 1463.5 549 1409.79 497.39 1357.93 547.9 1304.5 496 1270.69 463.16 1297.43 432.56 1266.5 397 1265.44 395.78 1264.27 \
394.61 1263.03 393.5 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1264.7 391.69 1257.65 389.36 1261.71 395.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1327.5 489.6 0 46 10 -annotation ",
		label=annotation,
		lp="1327.5,491.5",
		pos="e,1256.5,388.44 1675.2,602.52 1656,599.42 1633.8,596.16 1613.5,594 1598.4,592.4 1489.7,594.97 1477.5,586 1463.3,575.59 1476.2,561.18 \
1463.5,549 1409.8,497.39 1357.9,547.9 1304.5,496 1270.7,463.16 1297.4,432.56 1266.5,397 1265.4,395.78 1264.3,394.61 1263,393.5"];
	annotation -> Run_GeneMark	[_draw_="c 7 -#000000 B 28 1675.44 602.53 1656.23 599.42 1633.87 596.13 1613.5 594 1597.56 592.33 1481.49 596.64 1469.5 586 1463.76 580.91 \
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490.11 1449.5 479 1440.33 468.34 1446.5 461.56 1446.5 447.5 1446.5 447.5 1446.5 447.5 1446.5 378 1446.5 344.99 1212.31 337.29 1115.56 \
335.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1115.74 333.07 1108.7 335.4 1115.66 337.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1472.5 467.1 0 46 10 -annotation ",
		label=annotation,
		lp="1472.5,469",
		pos="e,1107.2,335.38 1675.4,602.53 1656.2,599.42 1633.9,596.13 1613.5,594 1597.6,592.33 1481.5,596.64 1469.5,586 1463.8,580.91 1467.2,\
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479 1440.3,468.34 1446.5,461.56 1446.5,447.5 1446.5,447.5 1446.5,447.5 1446.5,378 1446.5,344.99 1212.3,337.29 1115.6,335.52"];
	AntiFamLib -> Search_ab_initio_for_AntiFam	[_draw_="c 7 -#000000 B 7 502.37 602.61 508.53 595.72 514.9 585.72 510.5 577 510.02 576.05 509.46 575.14 508.84 574.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 510.8 572.78 504.16 569.48 507.3 576.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 533 579.6 0 43 8 -hmm_path ",
		label=hmm_path,
		lp="533,581.5",
		pos="e,503.1,568.4 502.37,602.61 508.53,595.72 514.9,585.72 510.5,577 510.02,576.05 509.46,575.14 508.84,574.28"];
	genemark_path -> Run_GeneMark	[_draw_="c 7 -#000000 B 13 946.33 602.53 950.47 592.57 956.5 575.43 956.5 560 956.5 560 956.5 560 956.5 490.5 956.5 476.49 950.27 472 955.5 \
459 975.62 408.98 1026.62 367.8 1054.89 347.89 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1055.93 350.15 1060.3 344.16 1053.15 346.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 987.5 467.1 0 64 13 -genemark_path ",
		label=genemark_path,
		lp="987.5,469",
		pos="e,1061.5,343.3 946.33,602.53 950.47,592.57 956.5,575.43 956.5,560 956.5,560 956.5,560 956.5,490.5 956.5,476.49 950.27,472 955.5,\
459 975.62,408.98 1026.6,367.8 1054.9,347.89"];
	wp_hashes -> Name_by_WPs	[_draw_="c 7 -#000000 B 10 146.65 602.84 150.21 592.88 155.5 575.46 155.5 560 155.5 560 155.5 560 155.5 198 155.5 178.91 173.26 168.27 192.15 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 192.72 164.74 198.81 160.5 191.41 160.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 178.5 377.1 0 46 9 -wp_hashes ",
		label=wp_hashes,
		lp="178.5,379",
		pos="e,200.26,160.1 146.65,602.84 150.21,592.88 155.5,575.46 155.5,560 155.5,560 155.5,560 155.5,198 155.5,178.91 173.26,168.27 192.15,\
162.36"];
	Find_Best_Evidence_Alignments -> Find_Best_Evidence_Alignments_aligns	[_draw_="c 7 -#000000 B 10 1326.1 369.52 1391.14 360.61 1469.5 343.46 1469.5 312.5 1469.5 312.5 1469.5 312.5 1469.5 108 1469.5 93.21 1541.04 \
81.75 1606.01 74.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1606.11 76.85 1612.8 73.64 1605.57 71.98 ",
		pos="e,1614.3,73.474 1326.1,369.52 1391.1,360.61 1469.5,343.46 1469.5,312.5 1469.5,312.5 1469.5,312.5 1469.5,108 1469.5,93.209 1541,81.751 \
1606,74.395"];
	Find_Best_Evidence_Alignments -> Run_GeneMark	[_draw_="c 7 -#000000 B 7 1212.33 369.51 1194.41 364.23 1170.67 357.42 1149.5 352 1138.57 349.2 1126.69 346.4 1115.68 343.9 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1116.3 341.53 1108.93 342.39 1115.22 346.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1204.5 354.6 0 46 10 -alignments ",
		label=alignments,
		lp="1204.5,356.5",
		pos="e,1107.5,342.06 1212.3,369.51 1194.4,364.23 1170.7,357.42 1149.5,352 1138.6,349.2 1126.7,346.4 1115.7,343.9"];
	PGAP_plus_ab_initio	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 566 234.5 566 253.5 679 253.5 679 234.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 622.5 241.5 0 97 18 -bact_entries_merge ",
		height=0.27778,
		label=bact_entries_merge,
		pos="622.5,244",
		rects="566,234.5,679,253.5",
		width=1.5694];
	PGAP_plus_ab_initio -> PGAP_plus_ab_initio_annotation	[_draw_="c 7 -#000000 B 13 678.97 242.24 838.58 239.74 1281.5 230.08 1281.5 200 1281.5 200 1281.5 200 1281.5 108 1281.5 70.22 1150.74 88.36 \
1113.5 82 1100.89 79.85 1087.33 77.39 1074.63 75.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1075.24 72.65 1067.91 73.77 1074.34 77.47 ",
		pos="e,1066.4,73.491 678.97,242.24 838.58,239.74 1281.5,230.08 1281.5,200 1281.5,200 1281.5,200 1281.5,108 1281.5,70.222 1150.7,88.358 \
1113.5,82 1100.9,79.848 1087.3,77.391 1074.6,75.027"];
	Extract_Model_Proteins	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 299 189.5 299 208.5 390 208.5 390 189.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 344.5 196.5 0 75 15 -protein_extract ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label=protein_extract,
		pos="344.5,199",
		rects="299,189.5,390,208.5",
		width=1.2639];
	PGAP_plus_ab_initio -> Extract_Model_Proteins	[_draw_="c 7 -#000000 B 7 587.15 234.56 562.66 228.95 529.24 221.76 499.5 217 465.9 211.62 427.94 207.43 397.99 204.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 398.47 202.13 391.27 203.91 398.01 207.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 557.5 219.6 0 22 5 -input ",
		label=input,
		lp="557.5,221.5",
		pos="e,389.76,203.77 587.15,234.56 562.66,228.95 529.24,221.76 499.5,217 465.9,211.62 427.94,207.43 397.99,204.55"];
	PGAP_plus_ab_initio -> Name_by_WPs	[_draw_="c 7 -#000000 B 7 566.33 241.33 468.53 237.9 275.12 228.71 251.5 209 240.79 200.06 237.37 184.18 236.44 171.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 238.89 171.9 236.18 165 233.99 172.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 274.5 197.1 0 46 9 -sequences ",
		label=sequences,
		lp="274.5,199",
		pos="e,236.13,163.48 566.33,241.33 468.53,237.9 275.12,228.71 251.5,209 240.79,200.06 237.37,184.18 236.44,171.95"];
	ab_initio_AntiFam_tainted_proteins	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 462.5 504.5 462.5 523.5 512.5 523.5 512.5 504.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 487.5 511.5 0 34 6 -reduce ",
		height=0.27778,
		label=reduce,
		pos="487.5,514",
		rects="462.5,504.5,512.5,523.5",
		width=0.69444];
	Good_ab_initio_proteins	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 446 459.5 446 478.5 529 478.5 529 459.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 487.5 466.5 0 67 13 -set_operation ",
		height=0.27778,
		label=set_operation,
		pos="487.5,469",
		rects="446,459.5,529,478.5",
		width=1.1528];
	ab_initio_AntiFam_tainted_proteins -> Good_ab_initio_proteins	[_draw_="c 7 -#000000 B 4 487.5 504.71 487.5 499.59 487.5 492.85 487.5 486.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 489.95 486.78 487.5 479.78 485.05 486.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 490.5 489.6 0 6 1 -B ",
		label=B,
		lp="490.5,491.5",
		pos="e,487.5,478.27 487.5,504.71 487.5,499.59 487.5,492.85 487.5,486.67"];
	Search_ab_initio_for_AntiFam -> ab_initio_AntiFam_tainted_proteins	[_draw_="c 7 -#000000 B 4 487.5 549.71 487.5 544.59 487.5 537.85 487.5 531.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 489.95 531.78 487.5 524.78 485.05 531.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 500 534.6 0 25 6 -aligns ",
		label=aligns,
		lp="500,536.5",
		pos="e,487.5,523.27 487.5,549.71 487.5,544.59 487.5,537.85 487.5,531.67"];
	Search_Naming_HMMs -> Search_Naming_HMMs_hmm_hits	[_draw_="c 7 -#000000 B 4 508.69 144.56 576.15 128.39 723.48 93.06 796.99 75.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 797.44 77.84 803.68 73.83 796.3 73.08 ",
		pos="e,805.15,73.477 508.69,144.56 576.15,128.39 723.48,93.059 796.99,75.434"];
	Search_Naming_HMMs -> Assign_Naming_HMM_to_Proteins	[_draw_="c 7 -#000000 B 4 537.76 149.77 702.45 141.49 1136.76 119.64 1281.1 112.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1281 114.84 1287.86 112.04 1280.75 109.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 988.5 129.6 0 22 5 -input ",
		label=input,
		lp="988.5,131.5",
		pos="e,1289.4,111.97 537.76,149.77 702.45,141.49 1136.8,119.64 1281.1,112.38"];
	Assign_Naming_HMM_to_Proteins -> Assign_Naming_HMM_to_Proteins_assignments	[_draw_="c 7 -#000000 B 4 1310.72 99.5 1297.28 93.09 1278.66 84.19 1263.69 77.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1264.98 74.94 1257.61 74.13 1262.87 79.36 ",
		pos="e,1256.2,73.478 1310.7,99.505 1297.3,93.085 1278.7,84.188 1263.7,77.036"];
	Extract_Model_Proteins -> Extract_Model_Proteins_proteins	[_draw_="c 7 -#000000 B 7 335.31 189.78 333.01 187.21 330.82 184.2 329.5 181 315.83 147.89 317.75 104.91 320.22 81.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 322.64 82.02 321.05 74.78 317.78 81.44 ",
		pos="e,321.23,73.278 335.31,189.78 333.01,187.21 330.82,184.2 329.5,181 315.83,147.89 317.75,104.91 320.22,81.68"];
	Extract_Model_Proteins -> Extract_Model_Proteins_lds2	[_draw_="c 7 -#000000 B 10 340.79 189.68 332.51 169.67 315.12 118.4 340.5 90 351.08 78.16 395.82 84.5 411.5 82 423.52 80.08 436.44 77.6 448.39 \
75.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 448.66 77.58 455.01 73.74 447.65 72.78 ",
		pos="e,456.49,73.429 340.79,189.68 332.51,169.67 315.12,118.4 340.5,90 351.08,78.161 395.82,84.503 411.5,82 423.52,80.082 436.44,77.601 \
448.39,75.13"];
	Extract_Model_Proteins -> Extract_Model_Proteins_seqids	[_draw_="c 7 -#000000 B 10 344.96 189.94 345.65 184.37 347.36 177.07 351.5 172 369.11 150.45 381.69 154.4 407.5 144 480.47 114.59 568.83 \
89.22 619.47 75.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 619.97 78.02 626.1 73.85 618.71 73.29 ",
		pos="e,627.56,73.459 344.96,189.94 345.65,184.37 347.36,177.07 351.5,172 369.11,150.45 381.69,154.4 407.5,144 480.47,114.59 568.83,89.223 \
619.47,75.62"];
	Extract_Model_Proteins -> Search_Naming_HMMs	[_draw_="c 7 -#000000 B 7 347.46 189.59 349.99 183.7 354.22 176.15 360.5 172 367.82 167.16 383.57 163.64 401.05 161.1 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 401.08 163.56 407.68 160.2 400.42 158.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 377.5 174.6 0 34 8 -proteins ",
		label=proteins,
		lp="377.5,176.5",
		pos="e,409.18,160 347.46,189.59 349.99,183.7 354.22,176.15 360.5,172 367.82,167.16 383.57,163.64 401.05,161.1"];
	Extract_Model_Proteins -> Search_Naming_HMMs	[_draw_="c 7 -#000000 B 10 371.94 189.62 378.51 187.2 385.39 184.3 391.5 181 397.37 177.83 397.47 174.84 403.5 172 408.44 169.67 413.73 167.64 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 419.59 168.29 425.58 163.91 418.17 163.6 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 417.5 174.6 0 28 6 -seqids ",
		label=seqids,
		lp="417.5,176.5",
		pos="e,427.02,163.48 371.94,189.62 378.51,187.2 385.39,184.3 391.5,181 397.37,177.83 397.47,174.84 403.5,172 408.44,169.67 413.73,167.64 \
419.11,165.87"];
	Extract_Model_Proteins -> Search_Naming_HMMs	[_draw_="c 7 -#000000 B 10 389.68 192.65 402.58 190.12 416.42 186.42 428.5 181 434.58 178.27 434.85 175.54 440.5 172 443.05 170.4 445.77 \
168.82 448.52 167.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 449.36 169.63 454.39 164.18 447.06 165.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 449.5 174.6 0 18 4 -lds2 ",
		label=lds2,
		lp="449.5,176.5",
		pos="e,455.73,163.47 389.68,192.65 402.58,190.12 416.42,186.42 428.5,181 434.58,178.27 434.85,175.54 440.5,172 443.05,170.4 445.77,168.82 \
448.52,167.3"];
	Extract_Model_Proteins -> Name_by_WPs	[_draw_="c 7 -#000000 B 7 299.3 190.55 280.18 187.14 261.39 183.34 257.5 181 252.98 178.28 249.02 174.21 245.79 170.09 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 247.97 168.92 241.95 164.59 243.95 171.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 266.5 174.6 0 18 4 -lds2 ",
		label=lds2,
		lp="266.5,176.5",
		pos="e,241.09,163.35 299.3,190.55 280.18,187.14 261.39,183.34 257.5,181 252.98,178.28 249.02,174.21 245.79,170.09"];
	Extract_Model_Proteins -> Name_by_WPs	[_draw_="c 7 -#000000 B 10 306.58 189.54 299.07 187.24 291.39 184.41 284.5 181 278.53 178.04 278.21 175.44 272.5 172 269.72 170.32 266.74 \
168.69 263.74 167.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 265.03 165.04 257.66 164.14 262.86 169.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 301.5 174.6 0 34 8 -proteins ",
		label=proteins,
		lp="301.5,176.5",
		pos="e,256.31,163.47 306.58,189.54 299.07,187.24 291.39,184.41 284.5,181 278.53,178.04 278.21,175.44 272.5,172 269.72,170.32 266.74,168.69 \
263.74,167.14"];
	Name_by_WPs -> Name_by_WPs_names	[_draw_="c 7 -#000000 B 4 229.79 144.56 217.84 129.54 192.76 98.01 178.01 79.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 180.31 78.42 174.03 74.47 176.47 81.47 ",
		pos="e,173.09,73.284 229.79,144.56 217.84,129.54 192.76,98.013 178.01,79.472"];
	Good_ab_initio_annotations -> Find_Best_Evidence_Alignments	[_draw_="c 7 -#000000 B 7 781.37 414.6 799.74 408.55 825.9 400.79 849.5 397 904.34 388.18 1048.59 383.69 1145.7 381.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1145.61 384.05 1152.55 381.46 1145.5 379.15 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 872.5 399.6 0 46 10 -annotation ",
		label=annotation,
		lp="872.5,401.5",
		pos="e,1154.1,381.42 781.37,414.6 799.74,408.55 825.9,400.79 849.5,397 904.34,388.18 1048.6,383.69 1145.7,381.6"];
	Good_ab_initio_annotations -> PGAP_plus_ab_initio	[_draw_="c 7 -#000000 B 7 733.95 414.63 705.78 403.29 659.52 380.2 636.5 344 620.51 318.85 619.67 282.9 620.85 261.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 623.29 262.15 621.38 254.99 618.41 261.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 654 332.1 0 35 9 -ab_initio ",
		label=ab_initio,
		lp="654,334",
		pos="e,621.49,253.48 733.95,414.63 705.78,403.29 659.52,380.2 636.5,344 620.51,318.85 619.67,282.9 620.85,261.95"];
	Run_GeneMark_Post -> Run_GeneMark_Post_models	[_draw_="c 7 -#000000 B 10 1083.34 287.9 1190.33 287.06 1447.5 281.28 1447.5 245 1447.5 245 1447.5 245 1447.5 108 1447.5 99.31 1447.5 89.63 \
1447.5 81.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1449.95 81.76 1447.5 74.76 1445.05 81.76 ",
		pos="e,1447.5,73.243 1083.3,287.9 1190.3,287.06 1447.5,281.28 1447.5,245 1447.5,245 1447.5,245 1447.5,108 1447.5,99.308 1447.5,89.627 \
1447.5,81.655"];
	Run_GeneMark_Post -> PGAP_plus_ab_initio	[_draw_="c 7 -#000000 B 4 991.5 283.23 917.47 275.56 771.65 260.45 687.17 251.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 687.66 249.29 680.45 251 687.16 254.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 889.5 264.6 0 46 10 -annotation ",
		label=annotation,
		lp="889.5,266.5",
		pos="e,678.94,250.85 991.5,283.23 917.47,275.56 771.65,260.45 687.17,251.7"];
	Good_ab_initio_proteins -> Good_ab_initio_annotations	[_draw_="c 7 -#000000 B 10 528.77 464.14 555.14 461.33 590 456.96 620.5 451 635.84 448 639.22 445.28 654.5 442 666.57 439.41 679.5 437 691.99 \
434.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 692.13 437.31 698.62 433.73 691.31 432.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 685 444.6 0 61 14 -only_those_ids ",
		label=only_those_ids,
		lp="685,446.5",
		pos="e,700.11,433.48 528.77,464.14 555.14,461.33 590,456.96 620.5,451 635.84,448 639.22,445.28 654.5,442 666.57,439.41 679.5,437 691.99,\
434.85"];
	Run_GeneMark -> Run_GeneMark_Post	[_draw_="c 7 -#000000 B 7 1051.06 324.51 1047.38 322.25 1043.98 319.45 1041.5 316 1039.57 313.32 1038.41 310.08 1037.74 306.82 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1040.19 306.69 1037.07 299.97 1035.32 307.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1062.5 309.6 0 42 9 -pre_annot ",
		label=pre_annot,
		lp="1062.5,311.5",
		pos="e,1036.9,298.46 1051.1,324.51 1047.4,322.25 1044,319.45 1041.5,316 1039.6,313.32 1038.4,310.08 1037.7,306.82"];
	Run_GeneMark -> Run_GeneMark_Post	[_draw_="c 7 -#000000 B 7 1079.55 324.65 1082.13 319.22 1084.04 312.21 1080.5 307 1079.66 305.77 1078.72 304.62 1077.69 303.56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1079.23 301.66 1072.21 299.29 1076.22 305.52 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1116.5 309.6 0 70 14 -genemark_annot ",
		label=genemark_annot,
		lp="1116.5,311.5",
		pos="e,1071,298.35 1079.6,324.65 1082.1,319.22 1084,312.21 1080.5,307 1079.7,305.77 1078.7,304.62 1077.7,303.56"];
	Extract_ab_initio_Proteins -> Search_ab_initio_for_AntiFam	[_draw_="c 7 -#000000 B 13 67.08 602.59 76.57 599.28 87.93 595.84 98.5 594 201.02 576.16 229.19 598.48 332.5 586 351.88 583.66 356.28 580.47 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 419.48 572.18 426.03 568.7 418.74 567.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 389.5 579.6 0 28 6 -seqids ",
		label=seqids,
		lp="389.5,581.5",
		pos="e,427.53,568.47 67.078,602.59 76.565,599.28 87.933,595.84 98.5,594 201.02,576.16 229.19,598.48 332.5,586 351.88,583.66 356.28,580.47 \
375.5,577 389.58,574.46 404.69,571.99 419.12,569.76"];
	Extract_ab_initio_Proteins -> Search_ab_initio_for_AntiFam	[_draw_="c 7 -#000000 B 13 67.61 602.51 77 599.28 88.14 595.91 98.5 594 162.84 582.13 181.1 597.56 245.5 586 258.78 583.62 261.25 579.55 \
274.5 577 314.97 569.21 360.43 564.97 398.93 562.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 398.67 565.15 405.52 562.31 398.39 560.26 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 291.5 579.6 0 34 8 -proteins ",
		label=proteins,
		lp="291.5,581.5",
		pos="e,407.03,562.22 67.611,602.51 76.996,599.28 88.142,595.91 98.5,594 162.84,582.13 181.1,597.56 245.5,586 258.78,583.62 261.25,579.55 \
274.5,577 314.97,569.21 360.43,564.97 398.93,562.68"];
	Extract_ab_initio_Proteins -> Search_ab_initio_for_AntiFam	[_draw_="c 7 -#000000 B 13 67.34 602.52 76.77 599.24 88.03 595.85 98.5 594 121.17 590 284.69 595.83 305.5 586 310.34 583.71 308.73 579.43 \
313.5 577 328.65 569.29 363.86 565.07 398.67 562.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 398.68 565.22 405.51 562.34 398.37 560.33 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 322.5 579.6 0 18 4 -lds2 ",
		label=lds2,
		lp="322.5,581.5",
		pos="e,407.02,562.25 67.339,602.52 76.774,599.24 88.032,595.85 98.5,594 121.17,590 284.69,595.83 305.5,586 310.34,583.71 308.73,579.43 \
313.5,577 328.65,569.29 363.86,565.07 398.67,562.77"];
	Extract_ab_initio_Proteins -> Good_ab_initio_proteins	[_draw_="c 7 -#000000 B 7 71.92 602.52 80.4 599.79 89.85 596.77 98.5 594 229.55 552.09 385.51 502.45 453.26 480.89 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 453.71 483.32 459.64 478.86 452.23 478.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 293.5 534.6 0 6 1 -A ",
		label=A,
		lp="293.5,536.5",
		pos="e,461.08,478.4 71.916,602.52 80.404,599.79 89.848,596.77 98.5,594 229.55,552.09 385.51,502.45 453.26,480.89"];
}