digraph workflow {
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		bb="0,0,1059.7,503",
		bgcolor="#eeeeee",
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	subgraph cluster_inputs {
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			lheight=0.15,
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			lwidth=1.17,
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		all_prots	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 324.16 448.5 324.16 467.5 383.16 467.5 383.16 448.5 ",
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			rects="324.16,448.5,383.16,467.5",
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		uniColl_asn_cache	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 460.16 448.5 460.16 467.5 567.16 467.5 567.16 448.5 ",
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		compartments	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 231.66 448.5 231.66 467.5 319.66 467.5 319.66 448.5 ",
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		blastdb_dir	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 156.16 448.5 156.16 467.5 227.16 467.5 227.16 448.5 ",
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		taxid	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 571.16 448.5 571.16 467.5 612.16 467.5 612.16 448.5 ",
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			fillcolor="#94DDF4",
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		taxon_db	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 616.16 448.5 616.16 467.5 677.16 467.5 677.16 448.5 ",
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		go	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 123.16 448.5 123.16 467.5 152.16 467.5 152.16 448.5 ",
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			fillcolor="#94DDF4",
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			label=go,
			pos="137.66,458",
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			width=0.40278];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 114.66 8 114.66 63 222.66 63 222.66 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 168.66 15 0 92 16 -Workflow Outputs ",
			bb="114.66,8,222.66,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="168.66,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
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		align	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 147.16 35.5 147.16 54.5 188.16 54.5 188.16 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 167.66 42.5 0 25 5 -align ",
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			label=align,
			pos="167.66,45",
			rects="147.16,35.5,188.16,54.5",
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	}
	Get_Protein_FASTA	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 554.16 350.5 554.16 369.5 611.16 369.5 611.16 350.5 ",
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		label=getfasta,
		pos="582.66,360",
		rects="554.16,350.5,611.16,369.5",
		width=0.79167];
	all_prots -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 7 359.41 448.61 371.57 431.69 401.71 393.74 437.66 378 458.73 368.77 514.97 373.34 546.32 370.33 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 546.34 372.8 552.96 369.46 545.7 367.94 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 418.66 403.1 0 20 6 -gilist ",
		label=gilist,
		lp="418.66,405",
		pos="e,554.46,369.27 359.41,448.61 371.57,431.69 401.71,393.74 437.66,378 458.73,368.77 514.97,373.34 546.32,370.33"];
	Filter_Protein_Compartments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 120.66 170.5 120.66 189.5 188.66 189.5 188.66 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 154.66 177.5 0 52 12 -align_filter ",
		height=0.27778,
		label=align_filter,
		pos="154.66,180",
		rects="120.66,170.5,188.66,189.5",
		width=0.94444];
	all_prots -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 13 340.27 448.68 334.21 445.34 326.81 441.86 319.66 440 266.03 426.07 72.66 461.41 72.66 406 72.66 406 72.66 406 \
72.66 224 72.66 203.71 92.6 192.97 112.81 187.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 113.16 189.74 119.36 185.67 111.98 184.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 103.16 313.1 0 61 15 -query_allowlist ",
		label=query_allowlist,
		lp="103.16,315",
		pos="e,120.83,185.3 340.27,448.68 334.21,445.34 326.81,441.86 319.66,440 266.03,426.07 72.655,461.41 72.655,406 72.655,406 72.655,406 \
72.655,224 72.655,203.71 92.596,192.97 112.81,187.3"];
	Filter_Short_Sequences	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 167.66 350.5 167.66 369.5 229.66 369.5 229.66 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 198.66 357.5 0 46 10 -seq_filter ",
		height=0.27778,
		label=seq_filter,
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		rects="167.66,350.5,229.66,369.5",
		width=0.86111];
	all_prots -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 10 339.54 448.62 333.59 445.44 326.47 442.09 319.66 440 278.94 427.53 157.74 447.02 129.66 415 114.72 397.97 140.5 \
382.49 164.68 372.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 165.4 374.86 171.02 370.02 163.6 370.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 143.66 403.1 0 28 6 -seqids ",
		label=seqids,
		lp="143.66,405",
		pos="e,172.42,369.47 339.54,448.62 333.59,445.44 326.47,442.09 319.66,440 278.94,427.53 157.74,447.02 129.66,415 114.72,397.97 140.5,\
382.49 164.68,372.51"];
	Remap_cross_origin_alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 670.16 215.5 670.16 234.5 775.16 234.5 775.16 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 722.66 222.5 0 89 18 -cross_origin_fasta ",
		height=0.27778,
		label=cross_origin_fasta,
		pos="722.66,225",
		rects="670.16,215.5,775.16,234.5",
		width=1.4583];
	uniColl_asn_cache -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 19 537.61 448.52 547.95 445.24 560.26 441.84 571.66 440 637.48 429.37 812.84 448.21 870.66 415 881.29 408.89 879.06 \
401.18 889.66 395 902.32 387.61 911.66 397.72 921.66 387 936.68 370.88 940.79 305.7 927.66 288 910.16 264.43 836.26 246.35 782.19 \
235.95 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 782.85 233.58 775.52 234.69 781.94 238.4 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 956.66 335.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="956.66,337.5",
		pos="e,774.03,234.41 537.61,448.52 547.95,445.24 560.26,441.84 571.66,440 637.48,429.37 812.84,448.21 870.66,415 881.29,408.89 879.06,\
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235.95"];
	Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 255.66 260.5 255.66 279.5 341.66 279.5 341.66 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 298.66 267.5 0 70 13 -align_sort_ma ",
		height=0.27778,
		label=align_sort_ma,
		pos="298.66,270",
		rects="255.66,260.5,341.66,279.5",
		width=1.1944];
	uniColl_asn_cache -> Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 B 19 517.01 448.6 522.46 433.52 531.51 401.29 519.66 378 516.91 372.61 511.4 375.39 508.66 370 504.62 362.08 505.01 \
358.11 508.66 350 510.85 345.12 515.46 346.88 517.66 342 519.29 338.35 520.07 336.19 517.66 333 497.44 306.26 407.83 287.73 349.69 \
278.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 350.14 275.87 342.85 277.19 349.37 280.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 530.66 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="530.66,360",
		pos="e,341.35,276.95 517.01,448.6 522.46,433.52 531.51,401.29 519.66,378 516.91,372.61 511.4,375.39 508.66,370 504.62,362.08 505.01,358.11 \
508.66,350 510.85,345.12 515.46,346.88 517.66,342 519.29,338.35 520.07,336.19 517.66,333 497.44,306.26 407.83,287.73 349.69,278.28"];
	uniColl_asn_cache -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 7 533.72 448.5 547.53 441.56 565.06 430.38 574.66 415 581.62 403.83 583.38 388.89 583.54 377.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 585.99 377.84 583.41 370.89 581.09 377.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 603.66 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="603.66,405",
		pos="e,583.38,369.38 533.72,448.5 547.53,441.56 565.06,430.38 574.66,415 581.62,403.83 583.38,388.89 583.54,377.55"];
	Convert_PAF_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 694.66 260.5 694.66 279.5 750.66 279.5 750.66 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 722.66 267.5 0 40 7 -paf2asn ",
		height=0.27778,
		label=paf2asn,
		pos="722.66,270",
		rects="694.66,260.5,750.66,279.5",
		width=0.77778];
	uniColl_asn_cache -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 16 539.11 448.51 549.16 445.43 560.86 442.18 571.66 440 604.43 433.38 870.66 439.44 870.66 406 870.66 406 870.66 \
406 870.66 314 870.66 302.03 872.7 295.84 863.66 288 848.47 274.85 795.5 271.55 758.99 270.89 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 759.1 268.44 752.07 270.8 759.03 273.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 892.66 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="892.66,360",
		pos="e,750.55,270.78 539.11,448.51 549.16,445.43 560.86,442.18 571.66,440 604.43,433.38 870.66,439.44 870.66,406 870.66,406 870.66,406 \
870.66,314 870.66,302.03 872.7,295.84 863.66,288 848.47,274.85 795.5,271.55 758.99,270.89"];
	Align_Short_Proteins	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 200.16 305.5 200.16 324.5 337.16 324.5 337.16 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 268.66 312.5 0 121 23 -Seed Protein Alignments ",
		fillcolor="#F3CEA1",
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		label="Seed Protein Alignments",
		pos="268.66,315",
		rects="200.16,305.5,337.16,324.5",
		width=1.9028];
	uniColl_asn_cache -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 10 502.4 448.65 487.21 436.74 460.46 413.38 446.66 387 435.3 365.3 453.81 349.44 435.66 333 428.63 326.64 385.65 \
322.36 345.06 319.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 345.36 317.24 338.22 319.24 345.05 322.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 484.66 380.6 0 76 17 -uniColl_asn_cache ",
		label=uniColl_asn_cache,
		lp="484.66,382.5",
		pos="e,336.71,319.15 502.4,448.65 487.21,436.74 460.46,413.38 446.66,387 435.3,365.3 453.81,349.44 435.66,333 428.63,326.64 385.65,322.36 \
345.06,319.68"];
	Filter_Protein_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 99.16 80.5 99.16 99.5 236.16 99.5 236.16 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 167.66 87.5 0 121 25 -Filter Protein Alignments ",
		height=0.27778,
		label="Filter Protein Alignments",
		pos="167.66,90",
		rects="99.155,80.5,236.16,99.5",
		width=1.9028];
	uniColl_asn_cache -> Filter_Protein_Alignments	[_draw_="c 7 -#000000 B 25 537.33 448.58 547.72 445.27 560.15 441.83 571.66 440 685.83 421.82 717.78 451.94 831.66 432 855.61 427.81 863.67 \
428.85 883.66 415 893.01 408.52 890.18 401.31 899.66 395 910.43 387.83 915.53 391.52 927.66 387 953.37 377.42 983.66 388.44 983.66 \
361 983.66 361 983.66 361 983.66 134 983.66 97.18 446.92 91.8 244.06 91.08 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 244.34 88.63 237.34 91.06 244.33 93.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1021.66 268.1 0 76 17 -uniColl_asn_cache ",
		label=uniColl_asn_cache,
		lp="1021.7,270",
		pos="e,235.82,91.055 537.33,448.58 547.72,445.27 560.15,441.83 571.66,440 685.83,421.82 717.78,451.94 831.66,432 855.61,427.81 863.67,\
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	Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 239.66 215.5 239.66 234.5 409.66 234.5 409.66 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 324.66 222.5 0 154 31 -Filter Full-Coverage Alignments ",
		height=0.27778,
		label="Filter Full-Coverage Alignments",
		pos="324.66,225",
		rects="239.66,215.5,409.66,234.5",
		width=2.3611];
	uniColl_asn_cache -> Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 B 16 541.35 448.53 573.13 438.52 621.56 422.33 626.66 415 638.53 397.92 617 354.31 611.66 350 598.78 339.62 552.94 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 355.4 235.33 347.99 235 353.58 239.88 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 575.66 335.6 0 76 17 -uniColl_asn_cache ",
		label=uniColl_asn_cache,
		lp="575.66,337.5",
		pos="e,346.59,234.43 541.35,448.53 573.13,438.52 621.56,422.33 626.66,415 638.53,397.92 617,354.31 611.66,350 598.78,339.62 552.94,348.33 \
537.66,342 513.41,331.96 513.89,318.93 491.66,305 446.11,276.47 388.64,251.44 354.37,237.55"];
	uniColl_asn_cache -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 10 488.93 448.56 479 445.45 467.39 442.16 456.66 440 406.26 429.83 269.08 444.04 226.66 415 219.81 410.31 210.82 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 207.27 376.19 202.37 370.62 202.73 378.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 248.66 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="248.66,405",
		pos="e,201.8,369.22 488.93,448.56 479,445.45 467.39,442.16 456.66,440 406.26,429.83 269.08,444.04 226.66,415 219.81,410.31 210.82,391.03 \
204.89,376.84"];
	Get_Genomic_FASTA	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 757.16 350.5 757.16 369.5 862.16 369.5 862.16 350.5 ",
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		height=0.27778,
		label=cross_origin_fasta,
		pos="809.66,360",
		rects="757.16,350.5,862.16,369.5",
		width=1.4583];
	asn_cache -> Get_Genomic_FASTA	[_draw_="c 7 -#000000 B 10 437.93 448.55 444.52 445.44 452.3 442.15 459.66 440 531.68 418.93 553.38 431.21 626.66 415 680.18 403.16 740.97 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 777.77 374.45 783.64 369.92 776.22 369.8 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 724.66 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="724.66,405",
		pos="e,785.07,369.44 437.93,448.55 444.52,445.44 452.3,442.15 459.66,440 531.68,418.93 553.38,431.21 626.66,415 680.18,403.16 740.97,\
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	asn_cache -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 7 419.67 448.85 413.39 422.76 394.83 342.46 401.66 333 461.02 250.63 586.55 230.71 661.84 226.46 ",
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		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 423.66 335.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="423.66,337.5",
		pos="e,670.31,226.04 419.67,448.85 413.39,422.76 394.83,342.46 401.66,333 461.02,250.63 586.55,230.71 661.84,226.46"];
	asn_cache -> Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 B 25 409.75 448.61 404.22 444.2 397.93 438.39 393.66 432 383.96 417.52 392.46 407.82 380.66 395 376.04 389.99 328.36 \
375.72 324.66 370 319.82 362.54 322.72 358.67 324.66 350 326.48 341.85 328.66 340.33 332.66 333 334.66 329.32 336.5 329.03 337.66 \
325 340.11 316.46 341.34 313.09 337.66 305 333.92 296.78 327.1 289.78 320.21 284.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 321.72 282.37 314.61 280.23 318.83 286.33 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 346.66 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="346.66,360",
		pos="e,313.39,279.34 409.75,448.61 404.22,444.2 397.93,438.39 393.66,432 383.96,417.52 392.46,407.82 380.66,395 376.04,389.99 328.36,\
375.72 324.66,370 319.82,362.54 322.72,358.67 324.66,350 326.48,341.85 328.66,340.33 332.66,333 334.66,329.32 336.5,329.03 337.66,\
325 340.11,316.46 341.34,313.09 337.66,305 333.92,296.78 327.1,289.78 320.21,284.3"];
	asn_cache -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 4 435.66 448.65 463.97 431.77 528.13 393.51 561.54 373.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 562.51 375.86 567.27 370.18 560 371.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 544.66 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="544.66,405",
		pos="e,568.57,369.4 435.66,448.65 463.97,431.77 528.13,393.51 561.54,373.59"];
	asn_cache -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 16 423.39 448.64 427.09 431.05 435.92 390.78 441.66 378 447.82 364.28 448.02 358.16 460.66 350 478.09 338.74 486.6 \
347.31 506.66 342 518.07 338.98 520.48 336.82 531.66 333 586.01 314.4 649.52 294.06 687.89 281.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 688.3 284.36 694.24 279.92 686.82 279.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 482.66 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="482.66,360",
		pos="e,695.68,279.46 423.39,448.64 427.09,431.05 435.92,390.78 441.66,378 447.82,364.28 448.02,358.16 460.66,350 478.09,338.74 486.6,\
347.31 506.66,342 518.07,338.98 520.48,336.82 531.66,333 586.01,314.4 649.52,294.06 687.89,281.92"];
	asn_cache -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 10 405.37 448.56 398.78 445.45 391 442.16 383.66 440 348.5 429.65 244.52 442.81 220.66 415 209.1 401.54 239.59 355.48 \
257.19 331.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 259.1 332.76 261.28 325.67 255.16 329.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 249.66 380.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="249.66,382.5",
		pos="e,262.18,324.45 405.37,448.56 398.78,445.45 391,442.16 383.66,440 348.5,429.65 244.52,442.81 220.66,415 209.1,401.54 239.59,355.48 \
257.19,331.22"];
	asn_cache -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 16 406.59 448.66 399.8 445.32 391.54 441.84 383.66 440 360.92 434.69 194.65 442.23 173.66 432 160.05 425.37 151.66 \
421.14 151.66 406 151.66 406 151.66 406 151.66 224 151.66 215.29 152.28 205.6 152.95 197.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 155.38 197.94 153.6 190.74 150.51 197.48 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 173.66 313.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="173.66,315",
		pos="e,153.74,189.23 406.59,448.66 399.8,445.32 391.54,441.84 383.66,440 360.92,434.69 194.65,442.23 173.66,432 160.05,425.37 151.66,\
421.14 151.66,406 151.66,406 151.66,406 151.66,224 151.66,215.29 152.28,205.6 152.95,197.64"];
	asn_cache -> Filter_Protein_Alignments	[_draw_="c 7 -#000000 B 19 405.8 448.52 399.14 445.33 391.2 441.99 383.66 440 327.75 425.23 163.53 457.81 124.66 415 91.68 378.69 159.37 \
346.77 133.66 305 104.43 257.52 21.66 304.25 21.66 248.5 21.66 248.5 21.66 248.5 21.66 134 21.66 117.6 55.97 107 91.33 100.42 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 91.4 102.9 97.87 99.26 90.55 98.07 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 91.66 268.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="91.655,270",
		pos="e,99.357,98.999 405.8,448.52 399.14,445.33 391.2,441.99 383.66,440 327.75,425.23 163.53,457.81 124.66,415 91.679,378.69 159.37,346.77 \
133.66,305 104.43,257.52 21.655,304.25 21.655,248.5 21.655,248.5 21.655,248.5 21.655,134 21.655,117.6 55.972,107 91.331,100.42"];
	asn_cache -> Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 B 25 415.63 448.89 412.21 444.1 407.96 437.85 404.66 432 395.76 416.24 399.41 408.76 387.66 395 383.49 390.13 379.4 \
392.2 375.66 387 365.71 373.17 377.35 362.39 365.66 350 357.94 341.82 348.23 351.12 341.66 342 337.21 335.83 342.47 332.51 343.66 \
325 349.35 288.94 365.43 275.43 348.66 243 348.15 242.03 347.57 241.1 346.92 240.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 348.69 238.53 342 235.35 345.25 242.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 363.66 335.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="363.66,337.5",
		pos="e,340.92,234.28 415.63,448.89 412.21,444.1 407.96,437.85 404.66,432 395.76,416.24 399.41,408.76 387.66,395 383.49,390.13 379.4,392.2 \
375.66,387 365.71,373.17 377.35,362.39 365.66,350 357.94,341.82 348.23,351.12 341.66,342 337.21,335.83 342.47,332.51 343.66,325 \
349.35,288.94 365.43,275.43 348.66,243 348.15,242.03 347.57,241.1 346.92,240.22"];
	Sort_Protein_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 135.16 125.5 135.16 144.5 200.16 144.5 200.16 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 167.66 132.5 0 49 10 -align_sort ",
		height=0.27778,
		label=align_sort,
		pos="167.66,135",
		rects="135.16,125.5,200.16,144.5",
		width=0.90278];
	asn_cache -> Sort_Protein_Alignments	[_draw_="c 7 -#000000 B 25 437.13 448.67 443.86 445.41 451.96 441.99 459.66 440 475.2 435.97 731.79 417.53 747.66 415 801.74 406.39 815.15 \
402.56 867.66 387 888.95 380.69 901.9 388.18 914.66 370 931.35 346.21 887.06 312.82 882.66 297 879.56 285.87 882.66 282.56 882.66 \
271 882.66 271 882.66 271 882.66 179 882.66 144.94 358.88 137.68 207.92 136.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 208.3 133.85 201.28 136.24 208.26 138.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 904.66 290.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="904.66,292.5",
		pos="e,199.77,136.23 437.13,448.67 443.86,445.41 451.96,441.99 459.66,440 475.2,435.97 731.79,417.53 747.66,415 801.74,406.39 815.15,\
402.56 867.66,387 888.95,380.69 901.9,388.18 914.66,370 931.35,346.21 887.06,312.82 882.66,297 879.56,285.87 882.66,282.56 882.66,\
271 882.66,271 882.66,271 882.66,179 882.66,144.94 358.88,137.68 207.92,136.3"];
	asn_cache -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 10 406.22 448.51 399.49 445.24 391.39 441.84 383.66 440 336.21 428.73 193.23 455.22 165.66 415 156.45 401.57 168.95 \
385.6 181.12 374.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 182.45 376.61 186.19 370.2 179.27 372.88 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 187.66 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="187.66,405",
		pos="e,187.34,369.22 406.22,448.51 399.49,445.24 391.39,441.84 383.66,440 336.21,428.73 193.23,455.22 165.66,415 156.45,401.57 168.95,\
385.6 181.12,374.52"];
	compartments -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 19 255.93 448.56 247.4 445.29 237.19 441.89 227.66 440 210.3 436.57 82.37 443.17 68.66 432 49.43 416.34 66.31 399.88 \
54.66 378 39.85 350.21 18.83 354.43 7.66 325 -14.56 266.46 14.76 229.87 68.66 198 81.92 190.16 98.14 185.86 112.91 183.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 112.84 186.01 119.44 182.63 112.17 181.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 37.66 313.1 0 60 12 -compartments ",
		label=compartments,
		lp="37.655,315",
		pos="e,120.94,182.43 255.93,448.56 247.4,445.29 237.19,441.89 227.66,440 210.3,436.57 82.368,443.17 68.655,432 49.434,416.34 66.314,399.88 \
54.655,378 39.85,350.21 18.826,354.43 7.6551,325 -14.564,266.46 14.756,229.87 68.655,198 81.919,190.16 98.144,185.86 112.91,183.53"];
	Extract_Proteins_From_Compartments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 272.66 395.5 272.66 414.5 380.66 414.5 380.66 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 326.66 402.5 0 92 17 -compart_annot2all ",
		height=0.27778,
		label=compart_annot2all,
		pos="326.66,405",
		rects="272.66,395.5,380.66,414.5",
		width=1.5];
	compartments -> Extract_Proteins_From_Compartments	[_draw_="c 7 -#000000 B 4 284.08 448.58 291.8 440.85 303.39 429.26 312.53 420.12 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 314.1 422.02 317.32 415.34 310.64 418.55 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 322.16 425.6 0 25 6 -aligns ",
		label=aligns,
		lp="322.16,427.5",
		pos="e,318.39,414.26 284.08,448.58 291.8,440.85 303.39,429.26 312.53,420.12"];
	blastdb_dir -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 13 175.32 448.67 168.23 445.42 159.71 442 151.66 440 141.48 437.47 64.75 439.72 57.66 432 46.53 419.89 49.01 408.99 \
57.66 395 75.49 366.14 166.04 340.12 222.57 326.34 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 222.94 328.77 229.18 324.75 221.8 324.01 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 98.66 380.6 0 46 11 -blastdb_dir ",
		label=blastdb_dir,
		lp="98.655,382.5",
		pos="e,230.65,324.4 175.32,448.67 168.23,445.42 159.71,442 151.66,440 141.48,437.47 64.746,439.72 57.655,432 46.531,419.89 49.01,408.99 \
57.655,395 75.491,366.14 166.04,340.12 222.57,326.34"];
	genomic_ids -> Get_Genomic_FASTA	[_draw_="c 7 -#000000 B 13 759.45 455.63 821.71 453.03 940.99 446.32 980.66 432 993.29 427.44 999.37 426.88 1005.66 415 1009.81 407.14 1011.38 \
401.8 1005.66 395 1004.53 393.66 926.31 380.4 869.04 370.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 869.55 368.44 862.24 369.71 868.75 373.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1018.66 403.1 0 20 6 -gilist ",
		label=gilist,
		lp="1018.7,405",
		pos="e,860.75,369.46 759.45,455.63 821.71,453.03 940.99,446.32 980.66,432 993.29,427.44 999.37,426.88 1005.7,415 1009.8,407.14 1011.4,\
401.8 1005.7,395 1004.5,393.66 926.31,380.4 869.04,370.84"];
	Compute_Gencode	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 899.66 395.5 899.66 414.5 1005.66 414.5 1005.66 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 952.66 402.5 0 90 15 -compute_gencode ",
		height=0.27778,
		label=compute_gencode,
		pos="952.66,405",
		rects="899.66,395.5,1005.7,414.5",
		width=1.4722];
	taxid -> Compute_Gencode	[_draw_="c 7 -#000000 B 13 601.18 448.63 605.58 445.29 611.06 441.81 616.66 440 675.88 420.84 837.51 451.41 896.66 432 903.33 429.81 903.46 \
426.31 909.66 423 913.19 421.11 916.97 419.31 920.78 417.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 921.64 419.94 927.16 414.99 919.76 415.42 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 920.16 425.6 0 21 5 -taxid ",
		label=taxid,
		lp="920.16,427.5",
		pos="e,928.56,414.4 601.18,448.63 605.58,445.29 611.06,441.81 616.66,440 675.88,420.84 837.51,451.41 896.66,432 903.33,429.81 903.46,\
426.31 909.66,423 913.19,421.11 916.97,419.31 920.78,417.64"];
	taxon_db -> Compute_Gencode	[_draw_="c 7 -#000000 B 10 660.45 448.64 666.69 445.29 674.31 441.81 681.66 440 708.64 433.34 906.77 444.38 931.66 432 936.45 429.62 940.51 \
425.57 943.75 421.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 945.7 422.87 947.57 415.69 941.63 420.14 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 960.66 425.6 0 38 8 -taxon_db ",
		label=taxon_db,
		lp="960.66,427.5",
		pos="e,948.41,414.44 660.45,448.64 666.69,445.29 674.31,441.81 681.66,440 708.64,433.34 906.77,444.38 931.66,432 936.45,429.62 940.51,\
425.57 943.75,421.38"];
	Get_Genomic_FASTA -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 7 813.93 350.68 816 345.51 817.66 338.78 815.66 333 801.62 292.54 763.7 257.65 740.85 239.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 742.51 237.64 735.48 235.28 739.5 241.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 830.66 290.6 0 70 16 -delta_seqs_input ",
		label=delta_seqs_input,
		lp="830.66,292.5",
		pos="e,734.28,234.35 813.93,350.68 816,345.51 817.66,338.78 815.66,333 801.62,292.54 763.7,257.65 740.85,239.45"];
	Run_Miniprot_fast	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 644.66 305.5 644.66 324.5 702.66 324.5 702.66 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 673.66 312.5 0 42 8 -miniprot ",
		height=0.27778,
		label=miniprot,
		pos="673.66,315",
		rects="644.66,305.5,702.66,324.5",
		width=0.80556];
	Get_Genomic_FASTA -> Run_Miniprot_fast	[_draw_="c 7 -#000000 B 10 759.18 350.5 742.02 347.35 726.23 344.04 722.66 342 718.01 339.35 719.02 336.1 714.66 333 712.12 331.2 709.37 \
329.54 706.52 328.02 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 707.62 325.83 700.25 325.01 705.5 330.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 739.66 335.6 0 34 6 -genome ",
		label=genome,
		lp="739.66,337.5",
		pos="e,698.88,324.36 759.18,350.5 742.02,347.35 726.23,344.04 722.66,342 718.01,339.35 719.02,336.1 714.66,333 712.12,331.2 709.37,329.54 \
706.52,328.02"];
	Run_Miniprot_slow	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 717.66 305.5 717.66 324.5 775.66 324.5 775.66 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 746.66 312.5 0 42 8 -miniprot ",
		height=0.27778,
		label=miniprot,
		pos="746.66,315",
		rects="717.66,305.5,775.66,324.5",
		width=0.80556];
	Get_Genomic_FASTA -> Run_Miniprot_slow	[_draw_="c 7 -#000000 B 7 797.19 350.53 793.18 347.81 788.73 344.78 784.66 342 778.48 337.79 771.76 333.19 765.7 329.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 767.38 327.23 760.22 325.29 764.61 331.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 801.66 335.6 0 34 6 -genome ",
		label=genome,
		lp="801.66,337.5",
		pos="e,758.97,324.44 797.19,350.53 793.18,347.81 788.73,344.78 784.66,342 778.48,337.79 771.76,333.19 765.7,329.05"];
	Remap_cross_origin_alignments -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 4 670.24 220.03 558.44 211.57 298.52 191.89 196.67 184.18 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 197.13 181.76 189.97 183.67 196.76 186.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 499.66 200.6 0 22 5 -input ",
		label=input,
		lp="499.66,202.5",
		pos="e,188.46,183.56 670.24,220.03 558.44,211.57 298.52,191.89 196.67,184.18"];
	Compute_Gencode_int	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 626.16 350.5 626.16 369.5 753.16 369.5 753.16 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 689.66 357.5 0 111 19 -Compute_Gencode_int ",
		height=0.27778,
		label=Compute_Gencode_int,
		pos="689.66,360",
		rects="626.16,350.5,753.16,369.5",
		width=1.7639];
	Compute_Gencode -> Compute_Gencode_int	[_draw_="c 7 -#000000 B 4 900.69 395.5 857.29 388.41 795.36 378.28 749.81 370.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 750.3 368.43 743 369.72 749.51 373.27 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 855.66 380.6 0 22 5 -input ",
		label=input,
		lp="855.66,382.5",
		pos="e,741.51,369.48 900.69,395.5 857.29,388.41 795.36,378.28 749.81,370.84"];
	Sort_Short_Protein_Alignments -> Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 B 7 295.76 260.75 294.39 255.37 293.64 248.37 296.66 243 297.27 241.92 297.98 240.89 298.76 239.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 300.22 241.92 303.76 235.4 296.93 238.29 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 324.16 245.6 0 55 12 -sorted_seeds ",
		label=sorted_seeds,
		lp="324.16,247.5",
		pos="e,304.88,234.39 295.76,260.75 294.39,255.37 293.64,248.37 296.66,243 297.27,241.92 297.98,240.89 298.76,239.93"];
	Get_Protein_FASTA -> Run_Miniprot_fast	[_draw_="c 7 -#000000 B 7 598.01 350.63 609.83 344.23 625.2 336.01 631.66 333 635.57 331.18 639.73 329.36 643.85 327.62 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 644.73 329.91 650.27 324.98 642.87 325.37 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 648.66 335.6 0 34 8 -proteins ",
		label=proteins,
		lp="648.66,337.5",
		pos="e,651.67,324.4 598.01,350.63 609.83,344.23 625.2,336.01 631.66,333 635.57,331.18 639.73,329.36 643.85,327.62"];
	Get_Protein_FASTA -> Run_Miniprot_slow	[_draw_="c 7 -#000000 B 13 611.09 352.74 615.62 351.79 620.26 350.84 624.66 350 645.46 346 653.12 352.28 671.66 342 676.34 339.4 675.08 335.78 \
679.66 333 682.53 331.25 695.71 327.78 709.64 324.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 710.13 326.83 716.38 322.83 709 322.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 696.66 335.6 0 34 8 -proteins ",
		label=proteins,
		lp="696.66,337.5",
		pos="e,717.85,322.48 611.09,352.74 615.62,351.79 620.26,350.84 624.66,350 645.46,346 653.12,352.28 671.66,342 676.34,339.4 675.08,335.78 \
679.66,333 682.53,331.25 695.71,327.78 709.64,324.43"];
	Run_Miniprot_fast -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 4 683.1 305.71 689.88 299.76 699.17 291.61 707.04 284.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 708.45 286.72 712.1 280.26 705.22 283.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 708.66 290.6 0 14 3 -paf ",
		label=paf,
		lp="708.66,292.5",
		pos="e,713.24,279.27 683.1,305.71 689.88,299.76 699.17,291.61 707.04,284.7"];
	Convert_PAF_Alignments -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 4 722.66 260.71 722.66 255.59 722.66 248.85 722.66 242.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 725.11 242.78 722.66 235.78 720.21 242.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 733.16 245.6 0 21 5 -align ",
		label=align,
		lp="733.16,247.5",
		pos="e,722.66,234.27 722.66,260.71 722.66,255.59 722.66,248.85 722.66,242.67"];
	Compute_Gencode_int -> Run_Miniprot_fast	[_draw_="c 7 -#000000 B 7 675.82 350.75 672.93 348.32 670.27 345.39 668.66 342 667.18 338.91 666.99 335.43 667.45 332.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 669.75 332.92 669.22 325.52 665.02 331.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 671.66 335.6 0 6 1 -T ",
		label=T,
		lp="671.66,337.5",
		pos="e,669.61,324.06 675.82,350.75 672.93,348.32 670.27,345.39 668.66,342 667.18,338.91 666.99,335.43 667.45,332.03"];
	Compute_Gencode_int -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 13 626.24 351.21 621.98 350.78 617.76 350.37 613.66 350 554.67 344.74 539.12 351.4 480.66 342 465.22 339.52 462.04 \
335.75 446.66 333 413.69 327.1 376.91 323.16 345.37 320.57 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 345.73 318.14 338.56 320.02 345.34 323.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 506.16 335.6 0 51 10 -db_gencode ",
		label=db_gencode,
		lp="506.16,337.5",
		pos="e,337.05,319.9 626.24,351.21 621.98,350.78 617.76,350.37 613.66,350 554.67,344.74 539.12,351.4 480.66,342 465.22,339.52 462.04,335.75 \
446.66,333 413.69,327.1 376.91,323.16 345.37,320.57"];
	Compute_Gencode_int -> Run_Miniprot_slow	[_draw_="c 7 -#000000 B 7 740.7 350.53 748.58 348.23 755 345.41 757.66 342 760.09 338.88 759.9 335.14 758.49 331.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 760.73 330.46 755.1 325.63 756.48 332.92 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 761.66 335.6 0 6 1 -T ",
		label=T,
		lp="761.66,337.5",
		pos="e,754.34,324.32 740.7,350.53 748.58,348.23 755,345.41 757.66,342 760.09,338.88 759.9,335.14 758.49,331.49"];
	Align_Short_Proteins -> Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 B 4 274.44 305.71 278.34 300.12 283.6 292.58 288.22 285.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 290.03 287.65 292.02 280.51 286.01 284.85 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 297.66 290.6 0 22 5 -input ",
		label=input,
		lp="297.66,292.5",
		pos="e,292.89,279.27 274.44,305.71 278.34,300.12 283.6,292.58 288.22,285.96"];
	Filter_Protein_Compartments -> Sort_Protein_Alignments	[_draw_="c 7 -#000000 B 4 157.16 170.71 158.74 165.47 160.84 158.53 162.75 152.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 165.04 153.12 164.72 145.71 160.35 151.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 173.66 155.6 0 22 5 -input ",
		label=input,
		lp="173.66,157.5",
		pos="e,165.16,144.27 157.16,170.71 158.74,165.47 160.84,158.53 162.75,152.24"];
	Filter_Protein_Alignments -> align	[_draw_="c 7 -#000000 B 4 167.66 80.71 167.66 75.59 167.66 68.85 167.66 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 170.11 62.78 167.66 55.78 165.21 62.78 ",
		pos="e,167.66,54.265 167.66,80.709 167.66,75.593 167.66,68.848 167.66,62.666"];
	Filter_Full_Coverage_Alignments -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 4 291.07 215.5 263.83 208.61 225.3 198.87 196.13 191.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 197.03 189.19 189.64 189.85 195.82 193.94 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 266.66 200.6 0 22 5 -input ",
		label=input,
		lp="266.66,202.5",
		pos="e,188.17,189.48 291.07,215.5 263.83,208.61 225.3,198.87 196.13,191.49"];
	Sort_Protein_Alignments -> Filter_Protein_Alignments	[_draw_="c 7 -#000000 B 4 167.66 125.71 167.66 120.59 167.66 113.85 167.66 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 170.11 107.78 167.66 100.78 165.21 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 180.16 110.6 0 25 7 -file_in ",
		label=file_in,
		lp="180.16,112.5",
		pos="e,167.66,99.265 167.66,125.71 167.66,120.59 167.66,113.85 167.66,107.67"];
	Run_Miniprot_slow -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 4 742.03 305.71 738.97 300.24 734.88 292.9 731.24 286.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 733.56 285.51 728.01 280.59 729.28 287.89 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 743.66 290.6 0 14 3 -paf ",
		label=paf,
		lp="743.66,292.5",
		pos="e,727.27,279.27 742.03,305.71 738.97,300.24 734.88,292.9 731.24,286.38"];
	Extract_Proteins_From_Compartments -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 7 344.36 395.59 358.03 389.53 377.61 381.77 395.66 378 460.54 364.44 481 379.88 546.27 370.56 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 546.42 373.02 552.97 369.53 545.68 368.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 405.66 380.6 0 20 6 -gilist ",
		label=gilist,
		lp="405.66,382.5",
		pos="e,554.46,369.3 344.36,395.59 358.03,389.53 377.61,381.77 395.66,378 460.54,364.44 481,379.88 546.27,370.56"];
	Extract_Proteins_From_Compartments -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 7 314.58 395.59 305.82 389.84 293.46 382.49 281.66 378 267.63 372.67 251.61 368.89 237.41 366.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 238.09 363.9 230.77 365.12 237.25 368.73 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 314.66 380.6 0 28 6 -seqids ",
		label=seqids,
		lp="314.66,382.5",
		pos="e,229.28,364.86 314.58,395.59 305.82,389.84 293.46,382.49 281.66,378 267.63,372.67 251.61,368.89 237.41,366.27"];
	Filter_Short_Sequences -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 7 198.46 350.69 198.77 345 200.15 337.66 204.66 333 206.16 331.45 207.79 330.03 209.51 328.74 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 210.66 330.91 215.32 325.14 208.08 326.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 218.66 335.6 0 28 6 -seqids ",
		label=seqids,
		lp="218.66,337.5",
		pos="e,216.6,324.34 198.46,350.69 198.77,345 200.15,337.66 204.66,333 206.16,331.45 207.79,330.03 209.51,328.74"];
}