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dbname [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 2198 1258.5 2198 1277.5 2254 1277.5 2254 1258.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2226 1265.5 0 40 6 -dbname ", fillcolor="#94DDF4", height=0.27778, label=dbname, pos="2226,1268", rects="2198,1258.5,2254,1277.5", width=0.77778]; } subgraph cluster_outputs { graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 45 8 100 1561 100 1561 45 ", _ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 62 52 0 92 16 -Workflow Outputs ", bb="8,45,1561,100", label="Workflow Outputs", labelloc=b, lheight=0.15, lp="62,54.5", lwidth=1.28, rank=same, style=dashed ]; checkm_raw [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1273 72.5 1273 91.5 1351 91.5 1351 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1312 79.5 0 62 10 -checkm_raw ", fillcolor="#94DDF4", height=0.27778, label=checkm_raw, pos="1312,82", rects="1273,72.5,1351,91.5", width=1.0833]; nucleotide_fasta [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 824 72.5 824 91.5 922 91.5 922 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 873 79.5 0 82 16 -nucleotide_fasta ", fillcolor="#94DDF4", height=0.27778, label=nucleotide_fasta, pos="873,82", rects="824,72.5,922,91.5", width=1.3611]; gbk [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 784.5 72.5 784.5 91.5 819.5 91.5 819.5 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 802 79.5 0 19 3 -gbk ", fillcolor="#94DDF4", height=0.27778, label=gbk, pos="802,82", rects="784.5,72.5,819.5,91.5", width=0.48611]; cds_nucleotide_fasta [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 612.5 72.5 612.5 91.5 731.5 91.5 731.5 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 672 79.5 0 103 20 -cds_nucleotide_fasta ", fillcolor="#94DDF4", height=0.27778, label=cds_nucleotide_fasta, pos="672,82", rects="612.5,72.5,731.5,91.5", width=1.6528]; all_proc_annot_stats [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1044.5 72.5 1044.5 91.5 1161.5 91.5 1161.5 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1103 79.5 0 101 20 -all_proc_annot_stats ", fillcolor="#94DDF4", height=0.27778, label=all_proc_annot_stats, pos="1103,82", rects="1044.5,72.5,1161.5,91.5", width=1.625]; gbent [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 736 72.5 736 91.5 780 91.5 780 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 758 79.5 0 28 5 -gbent ", fillcolor="#94DDF4", height=0.27778, label=gbent, pos="758,82", rects="736,72.5,780,91.5", width=0.61111]; cds_protein_fasta [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1165.5 72.5 1165.5 91.5 1268.5 91.5 1268.5 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1217 79.5 0 87 17 -cds_protein_fasta ", fillcolor="#94DDF4", height=0.27778, label=cds_protein_fasta, pos="1217,82", rects="1165.5,72.5,1268.5,91.5", width=1.4306]; final_asnval_error_diag [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 72.5 16 91.5 146 91.5 146 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 81 79.5 0 114 23 -final_asnval_error_diag ", fillcolor="#94DDF4", height=0.27778, label=final_asnval_error_diag, pos="81,82", rects="16,72.5,146,91.5", width=1.8056]; final_asndisc_error_diag [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 150 72.5 150 91.5 284 91.5 284 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 217 79.5 0 118 24 -final_asndisc_error_diag ", fillcolor="#94DDF4", height=0.27778, label=final_asndisc_error_diag, pos="217,82", rects="150,72.5,284,91.5", width=1.8611]; sqn [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 288 72.5 288 91.5 322 91.5 322 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 305 79.5 0 18 3 -sqn ", fillcolor="#94DDF4", height=0.27778, label=sqn, pos="305,82", rects="288,72.5,322,91.5", width=0.47222]; proc_annot_stats [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1453 72.5 1453 91.5 1553 91.5 1553 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1503 79.5 0 84 16 -proc_annot_stats ", fillcolor="#94DDF4", height=0.27778, label=proc_annot_stats, pos="1503,82", rects="1453,72.5,1553,91.5", width=1.3889]; checkm_results [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1355.5 72.5 1355.5 91.5 1448.5 91.5 1448.5 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1402 79.5 0 77 14 -checkm_results ", fillcolor="#94DDF4", height=0.27778, label=checkm_results, pos="1402,82", rects="1355.5,72.5,1448.5,91.5", width=1.2917]; initial_asndisc_error_diag [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 326.5 72.5 326.5 91.5 467.5 91.5 467.5 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 397 79.5 0 125 26 -initial_asndisc_error_diag ", fillcolor="#94DDF4", height=0.27778, label=initial_asndisc_error_diag, pos="397,82", rects="326.5,72.5,467.5,91.5", width=1.9583]; initial_asnval_error_diag [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 471.5 72.5 471.5 91.5 608.5 91.5 608.5 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 540 79.5 0 121 25 -initial_asnval_error_diag ", fillcolor="#94DDF4", height=0.27778, label=initial_asnval_error_diag, pos="540,82", rects="471.5,72.5,608.5,91.5", width=1.9028]; gff [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 1011.5 72.5 1011.5 91.5 1040.5 91.5 1040.5 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1026 79.5 0 13 3 -gff ", fillcolor="#94DDF4", height=0.27778, label=gff, pos="1026,82", rects="1011.5,72.5,1040.5,91.5", width=0.40278]; protein_fasta [_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 926.5 72.5 926.5 91.5 1007.5 91.5 1007.5 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 967 79.5 0 65 13 -protein_fasta ", fillcolor="#94DDF4", height=0.27778, label=protein_fasta, pos="967,82", rects="926.5,72.5,1007.5,91.5", width=1.125]; } ping_start [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 771.5 1205.5 771.5 1224.5 818.5 1224.5 818.5 1205.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 795 1212.5 0 31 6 -pinger ", height=0.27778, label=pinger, pos="795,1215", rects="771.5,1205.5,818.5,1224.5", width=0.65278]; gc_assm_name -> ping_start [_draw_="c 7 -#000000 B 13 979.89 1258.64 971.09 1255.46 960.68 1252.11 951 1250 916.52 1242.49 904.87 1254.83 872 1242 865.79 1239.58 866 \ 1235.9 860 1233 849.54 1227.95 837.37 1224.26 826.42 1221.63 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 827.17 1219.28 819.8 1220.15 826.1 1224.07 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 887.5 1235.6 0 31 8 -instring ", label=instring, lp="887.5,1237.5", pos="e,818.33,1219.8 979.89,1258.6 971.09,1255.5 960.68,1252.1 951,1250 916.52,1242.5 904.87,1254.8 872,1242 865.79,1239.6 866,1235.9 \ 860,1233 849.54,1227.9 837.37,1224.3 826.42,1221.6"]; 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Prepare_Unannotated_Sequences_asnvalidate_evaluate [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1699.5 980.5 1699.5 999.5 1782.5 999.5 1782.5 980.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1741 987.5 0 67 12 -xml_evaluate ", height=0.27778, label=xml_evaluate, pos="1741,990", rects="1699.5,980.5,1782.5,999.5", width=1.1528]; ignore_all_errors -> Prepare_Unannotated_Sequences_asnvalidate_evaluate [_draw_="c 7 -#000000 B 34 1430.12 1258.57 1439.51 1255.35 1450.65 1251.97 1461 1250 1513.51 1239.99 1529.17 1255.05 1581 1242 1627.87 1230.2 \ 1637.56 1220.13 1680 1197 1686.5 1193.46 1687.59 1191.7 1694 1188 1699.57 1184.78 1793.02 1140.06 1797 1135 1807.47 1121.7 1794.75 \ 1110.64 1806 1098 1836.56 1063.64 1876.74 1099.75 1903 1062 1905.28 1058.72 1905.14 1056.38 1903 1053 1898.53 1045.95 1893.23 1049.18 \ 1886 1045 1861.14 1030.61 1859.5 1019.08 1833 1008 1819.72 1002.45 1804.61 998.7 1790.53 996.18 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1791.18 993.8 1783.88 995.08 1790.38 998.64 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1835 1123.1 0 68 17 -ignore_all_errors ", label=ignore_all_errors, lp="1835,1125", pos="e,1782.4,994.83 1430.1,1258.6 1439.5,1255.3 1450.7,1252 1461,1250 1513.5,1240 1529.2,1255 1581,1242 1627.9,1230.2 1637.6,1220.1 \ 1680,1197 1686.5,1193.5 1687.6,1191.7 1694,1188 1699.6,1184.8 1793,1140.1 1797,1135 1807.5,1121.7 1794.8,1110.6 1806,1098 1836.6,\ 1063.6 1876.7,1099.8 1903,1062 1905.3,1058.7 1905.1,1056.4 1903,1053 1898.5,1045.9 1893.2,1049.2 1886,1045 1861.1,1030.6 1859.5,\ 1019.1 1833,1008 1819.7,1002.4 1804.6,998.7 1790.5,996.18"]; Prepare_Unannotated_Sequences_pgapx_input_check [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2020 1070.5 2020 1089.5 2130 1089.5 2130 1070.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2075 1077.5 0 94 17 -pgapx_input_check ", height=0.27778, label=pgapx_input_check, pos="2075,1080", rects="2020,1070.5,2130,1089.5", width=1.5278]; ignore_all_errors -> Prepare_Unannotated_Sequences_pgapx_input_check [_draw_="c 7 -#000000 B 22 1429.58 1258.59 1439.07 1255.28 1450.43 1251.84 1461 1250 1511.38 1241.22 1641.7 1255.59 1691 1242 1727.44 1231.96 \ 1804.26 1172.28 1840 1160 1861.28 1152.69 1867.83 1155.89 1890 1152 1910.95 1148.32 1916.07 1146.78 1937 1143 1957.85 1139.23 1964.11 \ 1142.31 1984 1135 2011.16 1125.02 2039.34 1106.88 2057.01 1094.4 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2058.43 1096.4 2062.68 1090.32 2055.57 1092.42 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1874 1168.1 0 68 17 -ignore_all_errors ", label=ignore_all_errors, lp="1874,1170", pos="e,2063.9,1089.4 1429.6,1258.6 1439.1,1255.3 1450.4,1251.8 1461,1250 1511.4,1241.2 1641.7,1255.6 1691,1242 1727.4,1232 1804.3,1172.3 \ 1840,1160 1861.3,1152.7 1867.8,1155.9 1890,1152 1910.9,1148.3 1916.1,1146.8 1937,1143 1957.9,1139.2 1964.1,1142.3 1984,1135 2011.2,\ 1125 2039.3,1106.9 2057,1094.4"]; Final_Bacterial_Package_asndisc_evaluate [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 322.5 125.5 322.5 144.5 405.5 144.5 405.5 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 364 132.5 0 67 12 -xml_evaluate ", height=0.27778, label=xml_evaluate, pos="364,135", rects="322.5,125.5,405.5,144.5", width=1.1528]; ignore_all_errors -> Final_Bacterial_Package_asndisc_evaluate [_draw_="c 7 -#000000 B 16 1386.7 1258.56 1377.16 1255.21 1365.68 1251.74 1355 1250 1283.27 1238.33 773.58 1245.71 701 1242 668.91 1240.36 \ 413 1248.13 413 1216 413 1216 413 1216 413 179 413 165.82 402.86 155.73 391.8 148.65 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 393.09 146.57 385.81 145.18 390.64 150.81 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 447 695.6 0 68 17 -ignore_all_errors ", label=ignore_all_errors, lp="447,697.5", pos="e,384.5,144.43 1386.7,1258.6 1377.2,1255.2 1365.7,1251.7 1355,1250 1283.3,1238.3 773.58,1245.7 701,1242 668.91,1240.4 413,1248.1 \ 413,1216 413,1216 413,1216 413,179 413,165.82 402.86,155.73 391.8,148.65"]; Prepare_Unannotated_Sequences_asndisc_evaluate [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1612.5 980.5 1612.5 999.5 1695.5 999.5 1695.5 980.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1654 987.5 0 67 12 -xml_evaluate ", height=0.27778, label=xml_evaluate, pos="1654,990", rects="1612.5,980.5,1695.5,999.5", width=1.1528]; ignore_all_errors -> Prepare_Unannotated_Sequences_asndisc_evaluate [_draw_="c 7 -#000000 B 25 1432.67 1258.58 1441.55 1255.68 1451.67 1252.53 1461 1250 1494.4 1240.93 1613 1250.61 1613 1216 1613 1216 1613 \ 1216 1613 1146.5 1613 1132.5 1605.39 1126.75 1613 1115 1616.9 1108.97 1725.48 1066.6 1731 1062 1732.17 1061.03 1761.55 1018.45 1762 \ 1017 1763.19 1013.18 1764.64 1011 1762 1008 1754.05 998.95 1723.57 1001.25 1703.49 1000.04 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1703.82 997.61 1696.61 999.33 1703.33 1002.48 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1647 1123.1 0 68 17 -ignore_all_errors ", label=ignore_all_errors, lp="1647,1125", pos="e,1695.1,999.18 1432.7,1258.6 1441.5,1255.7 1451.7,1252.5 1461,1250 1494.4,1240.9 1613,1250.6 1613,1216 1613,1216 1613,1216 1613,\ 1146.5 1613,1132.5 1605.4,1126.8 1613,1115 1616.9,1109 1725.5,1066.6 1731,1062 1732.2,1061 1761.5,1018.4 1762,1017 1763.2,1013.2 \ 1764.6,1011 1762,1008 1754,998.95 1723.6,1001.3 1703.5,1000"]; bacterial_trna [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1823 935.5 1823 954.5 1909 954.5 1909 935.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1866 942.5 0 70 12 -Run tRNAScan ", fillcolor="#F3CEA1", height=0.27778, label="Run tRNAScan", pos="1866,945", rects="1823,935.5,1909,954.5", width=1.1944]; taxid -> bacterial_trna [_draw_="c 7 -#000000 B 31 1491.57 1258.79 1495.98 1255.47 1501.46 1251.97 1507 1250 1545.67 1236.24 1558.67 1249.61 1599 1242 1668.65 1228.86 \ 1686.74 1224.65 1752 1197 1766.11 1191.02 1769.69 1189.13 1782 1180 1792.35 1172.32 1791.43 1165.69 1803 1160 1823.99 1149.69 1833.58 \ 1161.38 1855 1152 1913.82 1126.25 1940.12 1119.84 1968 1062 1972.22 1053.24 1968.97 1033.93 1963 1025 1951.57 1007.88 1940.27 1012.62 \ 1924 1000 1907.86 987.48 1890.93 971.31 1879.55 959.94 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1881.58 958.5 1874.91 955.25 1878.09 961.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1955.5 1100.6 0 21 5 -taxid ", label=taxid, lp="1955.5,1102.5", pos="e,1873.8,954.18 1491.6,1258.8 1496,1255.5 1501.5,1252 1507,1250 1545.7,1236.2 1558.7,1249.6 1599,1242 1668.7,1228.9 1686.7,1224.7 \ 1752,1197 1766.1,1191 1769.7,1189.1 1782,1180 1792.4,1172.3 1791.4,1165.7 1803,1160 1824,1149.7 1833.6,1161.4 1855,1152 1913.8,1126.3 \ 1940.1,1119.8 1968,1062 1972.2,1053.2 1969,1033.9 1963,1025 1951.6,1007.9 1940.3,1012.6 1924,1000 1907.9,987.48 1890.9,971.31 1879.6,\ 959.94"]; Get_Proteins [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2098.5 1115.5 2098.5 1134.5 2175.5 1134.5 2175.5 1115.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2137 1122.5 0 61 12 -Get Proteins ", fillcolor="#F3CEA1", height=0.27778, label="Get Proteins", pos="2137,1125", rects="2098.5,1115.5,2175.5,1134.5", width=1.0694]; taxid -> Get_Proteins [_draw_="c 7 -#000000 B 13 1491.52 1258.63 1495.92 1255.28 1501.41 1251.8 1507 1250 1569.84 1229.73 1740.96 1261.63 1804 1242 1882.04 1217.69 \ 1881.22 1168.15 1959 1143 1971.19 1139.06 2041.68 1133.13 2090.21 1129.42 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2090.39 1131.86 2097.19 1128.89 2090.02 1126.98 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1896.5 1190.6 0 21 5 -taxid ", label=taxid, lp="1896.5,1192.5", pos="e,2098.7,1128.8 1491.5,1258.6 1495.9,1255.3 1501.4,1251.8 1507,1250 1569.8,1229.7 1741,1261.6 1804,1242 1882,1217.7 1881.2,1168.1 \ 1959,1143 1971.2,1139.1 2041.7,1133.1 2090.2,1129.4"]; bacterial_orthology_conditional [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1062 440.5 1062 459.5 1202 459.5 1202 440.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1132 447.5 0 124 24 -bacterial_orthology_cond ", fillcolor="#F3CEA1", height=0.27778, label=bacterial_orthology_cond, pos="1132,450", rects="1062,440.5,1202,459.5", width=1.9444]; taxid -> bacterial_orthology_conditional [_draw_="c 7 -#000000 B 22 1491.51 1258.59 1495.91 1255.24 1501.39 1251.76 1507 1250 1525.39 1244.22 2181.72 1242.27 2201 1242 2244.75 1241.39 \ 3776 1259.76 3776 1216 3776 1216 3776 1216 3776 876.5 3776 802.37 3800.02 782.8 3786 710 3761.57 583.15 3741.89 523.01 3625 468 \ 3597.01 454.83 1629.8 451.62 1210.18 451.09 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1210.26 448.64 1203.25 451.08 1210.25 453.54 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3787.5 853.1 0 21 5 -taxid ", label=taxid, lp="3787.5,855", pos="e,1201.7,451.08 1491.5,1258.6 1495.9,1255.2 1501.4,1251.8 1507,1250 1525.4,1244.2 2181.7,1242.3 2201,1242 2244.8,1241.4 3776,1259.8 \ 3776,1216 3776,1216 3776,1216 3776,876.5 3776,802.37 3800,782.8 3786,710 3761.6,583.15 3741.9,523.01 3625,468 3597,454.83 1629.8,\ 451.62 1210.2,451.09"]; bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2657.5 530.5 2657.5 549.5 3058.5 549.5 3058.5 530.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2858 537.5 0 385 78 -Bacterial Annotation, pass 4, blastp-based functional annotation (second pass) ", fillcolor="#F3CEA1", height=0.27778, label="Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)", pos="2858,540", rects="2657.5,530.5,3058.5,549.5", width=5.5694]; taxid -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 40 1472.9 1258.67 1468.68 1255.34 1463.41 1251.85 1458 1250 1438.53 1243.34 1293.54 1243.14 1273 1242 1112.88 1233.14 \ 1061.76 1261.63 915 1197 908.23 1194.02 907.91 1190.63 901 1188 879.56 1179.84 867 1195.41 850 1180 831.63 1163.35 836 1150.79 836 \ 1126 836 1126 836 1126 836 1034 836 1010.16 974.99 902.95 995 890 1018.22 874.96 1027.28 877.42 1052 865 1070.05 855.93 1119.54 \ 836.64 1131 820 1143.76 801.48 1156.7 641.85 1162 620 1169.67 588.36 1170.03 568.03 1201 558 1234.94 547.01 2211.7 542.84 2649.38 \ 541.52 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2649.19 543.98 2656.19 541.5 2649.18 539.08 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1005.5 898.1 0 21 5 -taxid ", label=taxid, lp="1005.5,900", pos="e,2657.7,541.5 1472.9,1258.7 1468.7,1255.3 1463.4,1251.9 1458,1250 1438.5,1243.3 1293.5,1243.1 1273,1242 1112.9,1233.1 1061.8,1261.6 \ 915,1197 908.23,1194 907.91,1190.6 901,1188 879.56,1179.8 867,1195.4 850,1180 831.63,1163.3 836,1150.8 836,1126 836,1126 836,1126 \ 836,1034 836,1010.2 974.99,902.95 995,890 1018.2,874.96 1027.3,877.42 1052,865 1070.1,855.93 1119.5,836.64 1131,820 1143.8,801.48 \ 1156.7,641.85 1162,620 1169.7,588.36 1170,568.03 1201,558 1234.9,547.01 2211.7,542.84 2649.4,541.52"]; bacterial_annot_1st_pass [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1556.5 710.5 1556.5 729.5 1941.5 729.5 1941.5 710.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1749 717.5 0 369 77 -Bacterial Annotation, pass 2, blastp-based functional annotation (first pass) ", fillcolor="#F3CEA1", height=0.27778, label="Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)", pos="1749,720", rects="1556.5,710.5,1941.5,729.5", width=5.3472]; taxid -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 52 1482.93 1258.82 1484.36 1245.77 1487.04 1219.42 1488 1197 1489.93 1151.97 1493.92 1133.39 1466 1098 1462.47 1093.53 \ 1459.58 1094.43 1456 1090 1447.25 1079.18 1445.2 1075.54 1442 1062 1441.08 1058.11 1440.47 1056.7 1442 1053 1443.92 1048.35 1447.83 \ 1049.54 1450 1045 1457.12 1030.12 1464.12 1020.19 1453 1008 1439.92 993.66 1379.08 1014.34 1366 1000 1357.63 990.82 1354.71 950.77 \ 1369 935 1383.52 918.97 1396.61 934.22 1417 927 1431.45 921.88 1433.72 917.65 1447 910 1496.54 881.46 1504.28 864.55 1558 845 1600.36 \ 829.58 1613.21 833.1 1658 828 1718.6 821.1 1735.61 833.89 1795 820 1826.03 812.74 1839.18 815.22 1861 792 1872.41 779.86 1877.02 \ 768.31 1867 755 1859.43 744.94 1849.07 737.71 1837.61 732.54 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1838.75 730.36 1831.35 730 1836.91 734.9 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1376.5 988.1 0 21 5 -taxid ", label=taxid, lp="1376.5,990", pos="e,1829.9,729.44 1482.9,1258.8 1484.4,1245.8 1487,1219.4 1488,1197 1489.9,1152 1493.9,1133.4 1466,1098 1462.5,1093.5 1459.6,1094.4 \ 1456,1090 1447.3,1079.2 1445.2,1075.5 1442,1062 1441.1,1058.1 1440.5,1056.7 1442,1053 1443.9,1048.4 1447.8,1049.5 1450,1045 1457.1,\ 1030.1 1464.1,1020.2 1453,1008 1439.9,993.66 1379.1,1014.3 1366,1000 1357.6,990.82 1354.7,950.77 1369,935 1383.5,918.97 1396.6,934.22 \ 1417,927 1431.4,921.88 1433.7,917.65 1447,910 1496.5,881.46 1504.3,864.55 1558,845 1600.4,829.58 1613.2,833.1 1658,828 1718.6,821.1 \ 1735.6,833.89 1795,820 1826,812.74 1839.2,815.22 1861,792 1872.4,779.86 1877,768.31 1867,755 1859.4,744.94 1849.1,737.71 1837.6,\ 732.54"]; protein_alignment [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1583.5 665.5 1583.5 684.5 1914.5 684.5 1914.5 665.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1749 672.5 0 315 63 -Align reference proteins plane complete workflow, with miniprot ", fillcolor="#F3CEA1", height=0.27778, label="Align reference proteins plane complete workflow, with miniprot", pos="1749,675", rects="1583.5,665.5,1914.5,684.5", width=4.5972]; taxid -> protein_alignment [_draw_="c 7 -#000000 B 34 1494.09 1258.59 1518.12 1241.79 1570.08 1205.02 1576 1197 1585.46 1184.19 1621.29 1077.69 1624 1062 1624.68 1058.06 \ 1625.82 1056.56 1624 1053 1611.52 1028.63 1586.48 1041.37 1574 1017 1572.18 1013.44 1571.66 1011.24 1574 1008 1580.57 998.88 1588.99 \ 1006.72 1598 1000 1606.7 993.51 1605.62 988.77 1612 980 1626.75 959.73 1626.93 951.26 1646 935 1747.22 848.69 1851 966.49 1937 865 \ 1959.28 838.71 1964.15 736.4 1942 710 1932.29 698.43 1906.08 690.79 1876 685.76 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1876.65 683.38 1869.35 684.7 1875.88 688.22 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1633.5 965.6 0 21 5 -taxid ", label=taxid, lp="1633.5,967.5", pos="e,1867.9,684.47 1494.1,1258.6 1518.1,1241.8 1570.1,1205 1576,1197 1585.5,1184.2 1621.3,1077.7 1624,1062 1624.7,1058.1 1625.8,1056.6 \ 1624,1053 1611.5,1028.6 1586.5,1041.4 1574,1017 1572.2,1013.4 1571.7,1011.2 1574,1008 1580.6,998.88 1589,1006.7 1598,1000 1606.7,\ 993.51 1605.6,988.77 1612,980 1626.7,959.73 1626.9,951.26 1646,935 1747.2,848.69 1851,966.49 1937,865 1959.3,838.71 1964.2,736.4 \ 1942,710 1932.3,698.43 1906.1,690.79 1876,685.76"]; checkm [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1374.5 170.5 1374.5 189.5 1429.5 189.5 1429.5 170.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1402 177.5 0 39 6 -checkm ", fillcolor="#F3CEA1", height=0.27778, label=checkm, pos="1402,180", rects="1374.5,170.5,1429.5,189.5", width=0.76389]; taxid -> checkm [_draw_="c 7 -#000000 B 43 1472.93 1258.59 1468.71 1255.24 1463.44 1251.76 1458 1250 1438.29 1243.61 729.57 1252.99 712 1242 701.05 1235.15 \ 699 1228.92 699 1216 699 1216 699 1216 699 1101.5 699 935.59 795.99 911.7 816 747 816.48 743.03 817.53 741.7 816 738 814.08 733.35 \ 810.37 734.43 808 730 790.7 697.67 797.69 684.64 799 648 799.72 627.89 796.98 621.86 804 603 834.86 520.06 864.67 510.25 906 432 \ 924.76 396.48 926.57 386.19 944 350 951.33 334.78 961 332.89 961 316 961 316 961 316 961 224 961 183.36 1261.47 180.51 1366.37 180.76 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1366.22 183.21 1373.23 180.78 1366.24 178.31 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 818.5 718.1 0 21 5 -taxid ", label=taxid, lp="818.5,720", pos="e,1374.7,180.79 1472.9,1258.6 1468.7,1255.2 1463.4,1251.8 1458,1250 1438.3,1243.6 729.57,1253 712,1242 701.05,1235.1 699,1228.9 \ 699,1216 699,1216 699,1216 699,1101.5 699,935.59 795.99,911.7 816,747 816.48,743.03 817.53,741.7 816,738 814.08,733.35 810.37,734.43 \ 808,730 790.7,697.67 797.69,684.64 799,648 799.72,627.89 796.98,621.86 804,603 834.86,520.06 864.67,510.25 906,432 924.76,396.48 \ 926.57,386.19 944,350 951.33,334.78 961,332.89 961,316 961,316 961,316 961,224 961,183.36 1261.5,180.51 1366.4,180.76"]; xpath_fail_initial_asnvalidate -> Prepare_Unannotated_Sequences_asnvalidate_evaluate [_draw_="c 7 -#000000 B 22 1833 1258.6 1784.04 1246.36 1700.53 1222.32 1683 1197 1680.72 1193.71 1681.44 1191.68 1683 1188 1685.54 1182.03 \ 1764.46 1112.97 1767 1107 1776.39 1084.91 1755.03 1073.8 1767 1053 1782.9 1025.39 1813.1 1044.61 1829 1017 1831 1013.53 1831.55 \ 1011.09 1829 1008 1823.72 1001.61 1807.59 997.59 1790.56 995.08 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1790.93 992.66 1783.66 994.16 1790.28 997.51 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1779 1123.1 0 40 10 -xpath_fail ", label=xpath_fail, lp="1779,1125", pos="e,1782.2,993.96 1833,1258.6 1784,1246.4 1700.5,1222.3 1683,1197 1680.7,1193.7 1681.4,1191.7 1683,1188 1685.5,1182 1764.5,1113 1767,\ 1107 1776.4,1084.9 1755,1073.8 1767,1053 1782.9,1025.4 1813.1,1044.6 1829,1017 1831,1013.5 1831.5,1011.1 1829,1008 1823.7,1001.6 \ 1807.6,997.59 1790.6,995.08"]; bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2494.5 620.5 2494.5 639.5 3081.5 639.5 3081.5 620.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2788 627.5 0 571 115 -Bacterial Annotation, structural annotation, functional annotation: ab initio \ GeneMark, by WP, by HMM (second pass) ", fillcolor="#F3CEA1", height=0.27778, label="Bacterial Annotation, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)", pos="2788,630", rects="2494.5,620.5,3081.5,639.5", width=8.1528]; scatter_gather_nchunks -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 40 1602.1 1258.5 1614.84 1255.18 1630.04 1251.75 1644 1250 1705.41 1242.3 2139.12 1243.51 2201 1242 2264.81 1240.45 \ 3302.63 1240.86 3349 1197 3372.03 1175.21 3356 1157.71 3356 1126 3356 1126 3356 1126 3356 1034 3356 980.44 3287.72 1003.5 3265 955 \ 3261.23 946.95 3259.18 941.72 3265 935 3281.47 916.01 3300.12 941 3321 927 3335.15 917.52 3342.85 902.23 3331 890 3311.35 869.72 \ 3096.65 902.28 3077 882 3046.77 850.8 3149.76 730.01 3127 693 3103.78 655.24 3080.74 659.74 3038 648 3026.75 644.91 3009.24 642.37 \ 2988.59 640.28 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2988.92 637.85 2981.72 639.62 2988.45 642.73 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3314 943.1 0 98 22 -scatter_gather_nchunks ", label=scatter_gather_nchunks, lp="3314,945", pos="e,2980.2,639.48 1602.1,1258.5 1614.8,1255.2 1630,1251.7 1644,1250 1705.4,1242.3 2139.1,1243.5 2201,1242 2264.8,1240.4 3302.6,1240.9 \ 3349,1197 3372,1175.2 3356,1157.7 3356,1126 3356,1126 3356,1126 3356,1034 3356,980.44 3287.7,1003.5 3265,955 3261.2,946.95 3259.2,\ 941.72 3265,935 3281.5,916.01 3300.1,941 3321,927 3335.2,917.52 3342.9,902.23 3331,890 3311.4,869.72 3096.6,902.28 3077,882 3046.8,\ 850.8 3149.8,730.01 3127,693 3103.8,655.24 3080.7,659.74 3038,648 3026.8,644.91 3009.2,642.37 2988.6,640.28"]; scatter_gather_nchunks -> bacterial_trna [_draw_="c 7 -#000000 B 31 1598.81 1258.53 1632.77 1246.9 1693.77 1224.29 1742 1197 1766.06 1183.39 1767.4 1172.61 1792 1160 1824.4 1143.4 \ 1848.54 1164.41 1870 1135 1875.24 1127.82 1875.82 1121.72 1870 1115 1853.84 1096.32 1831.16 1125.68 1815 1107 1812.38 1103.97 1812.44 \ 1101.07 1815 1098 1821.37 1090.37 1849.31 1092.19 1859 1090 1882.13 1084.76 1947.59 1080.84 1962 1062 1991.06 1023.98 1895.47 1003.47 \ 1892 1000 1881.56 989.57 1874.71 974.12 1870.67 962.41 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1873.02 961.72 1868.58 955.78 1868.35 963.19 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1864 1100.6 0 98 22 -scatter_gather_nchunks ", label=scatter_gather_nchunks, lp="1864,1102.5", pos="e,1868.1,954.34 1598.8,1258.5 1632.8,1246.9 1693.8,1224.3 1742,1197 1766.1,1183.4 1767.4,1172.6 1792,1160 1824.4,1143.4 1848.5,1164.4 \ 1870,1135 1875.2,1127.8 1875.8,1121.7 1870,1115 1853.8,1096.3 1831.2,1125.7 1815,1107 1812.4,1104 1812.4,1101.1 1815,1098 1821.4,\ 1090.4 1849.3,1092.2 1859,1090 1882.1,1084.8 1947.6,1080.8 1962,1062 1991.1,1024 1895.5,1003.5 1892,1000 1881.6,989.57 1874.7,974.12 \ 1870.7,962.41"]; scatter_gather_nchunks -> bacterial_orthology_conditional [_draw_="c 7 -#000000 B 25 1601.74 1258.54 1614.56 1255.18 1629.91 1251.71 1644 1250 1714.71 1241.43 2854.78 1242.94 2926 1242 2974.85 1241.36 \ 3805 1264.85 3805 1216 3805 1216 3805 1216 3805 674 3805 620.2 3756.9 564.9 3728 530 3708.72 506.72 3702.5 501.24 3677 485 3661.05 \ 474.84 3656.5 471.92 3638 468 3577.2 455.11 1627.54 451.69 1210.15 451.1 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1210.27 448.65 1203.27 451.09 1210.26 453.55 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3854 853.1 0 98 22 -scatter_gather_nchunks ", label=scatter_gather_nchunks, lp="3854,855", pos="e,1201.8,451.09 1601.7,1258.5 1614.6,1255.2 1629.9,1251.7 1644,1250 1714.7,1241.4 2854.8,1242.9 2926,1242 2974.9,1241.4 3805,1264.9 \ 3805,1216 3805,1216 3805,1216 3805,674 3805,620.2 3756.9,564.9 3728,530 3708.7,506.72 3702.5,501.24 3677,485 3661.1,474.84 3656.5,\ 471.92 3638,468 3577.2,455.11 1627.5,451.69 1210.2,451.1"]; ab_initio_antifam [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1589 845.5 1589 864.5 1935 864.5 1935 845.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1762 852.5 0 330 69 -Bacterial Annotation, ab initio (first pass) searched against AntiFam ", fillcolor="#F3CEA1", height=0.27778, label="Bacterial Annotation, ab initio (first pass) searched against AntiFam", pos="1762,855", rects="1589,845.5,1935,864.5", width=4.8056]; scatter_gather_nchunks -> ab_initio_antifam [_draw_="c 7 -#000000 B 34 1573.62 1258.75 1574.75 1240.52 1576.15 1195.63 1566 1160 1553.57 1116.4 1555.15 1095.98 1518 1070 1497.03 1055.34 \ 1477.78 1081.31 1461 1062 1446.58 1045.42 1479.44 1049.91 1484 1045 1498.08 1029.83 1493.31 1020.52 1496 1000 1497.15 991.19 1501.44 \ 987.03 1496 980 1487.29 968.75 1473.71 983.25 1465 972 1462.55 968.84 1462.5 966.12 1465 963 1475.26 950.21 1485.89 961.35 1501 \ 955 1549.87 934.48 1552.02 910.26 1601 890 1628.03 878.82 1659.19 871.14 1686.86 865.96 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1687 868.42 1693.45 864.76 1686.13 863.6 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1510 1055.6 0 98 22 -scatter_gather_nchunks ", label=scatter_gather_nchunks, lp="1510,1057.5", pos="e,1694.9,864.49 1573.6,1258.7 1574.8,1240.5 1576.2,1195.6 1566,1160 1553.6,1116.4 1555.2,1096 1518,1070 1497,1055.3 1477.8,1081.3 \ 1461,1062 1446.6,1045.4 1479.4,1049.9 1484,1045 1498.1,1029.8 1493.3,1020.5 1496,1000 1497.2,991.19 1501.4,987.03 1496,980 1487.3,\ 968.75 1473.7,983.25 1465,972 1462.6,968.84 1462.5,966.12 1465,963 1475.3,950.21 1485.9,961.35 1501,955 1549.9,934.48 1552,910.26 \ 1601,890 1628,878.82 1659.2,871.14 1686.9,865.96"]; spurious_annot_prelim [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1671.5 755.5 1671.5 774.5 1762.5 774.5 1762.5 755.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1717 762.5 0 75 14 -spurious_annot ", fillcolor="#F3CEA1", height=0.27778, label=spurious_annot, pos="1717,765", rects="1671.5,755.5,1762.5,774.5", width=1.2639]; scatter_gather_nchunks -> spurious_annot_prelim [_draw_="c 7 -#000000 B 52 1541.23 1258.61 1531.3 1254.8 1520.89 1249.43 1513 1242 1496.79 1226.74 1499.33 1217.64 1491 1197 1482.35 1175.56 \ 1475.17 1114.53 1459 1098 1451.43 1090.26 1445.47 1095.23 1436 1090 1433.82 1088.8 1402.08 1064.24 1401 1062 1399.27 1058.39 1398.44 \ 1056.08 1401 1053 1413.42 1038.05 1431.58 1059.95 1444 1045 1449.68 1038.16 1449.99 1031.57 1444 1025 1431.07 1010.81 1372.82 1029.2 \ 1358 1017 1329.86 993.84 1333.74 961.28 1359 935 1373.38 920.04 1386.01 935.37 1405 927 1458.23 903.55 1454.59 870.22 1507 845 1538.97 \ 829.62 1549.81 832.57 1585 828 1625.37 822.76 1728.71 830.66 1768 820 1793.71 813.03 1807.25 814.82 1821 792 1823.06 788.57 1823.59 \ 786.05 1821 783 1817.44 778.81 1794.25 774.8 1770.67 771.73 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1771.1 769.32 1763.85 770.87 1770.49 774.18 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1407 1010.6 0 98 22 -scatter_gather_nchunks ", label=scatter_gather_nchunks, lp="1407,1012.5", pos="e,1762.4,770.69 1541.2,1258.6 1531.3,1254.8 1520.9,1249.4 1513,1242 1496.8,1226.7 1499.3,1217.6 1491,1197 1482.3,1175.6 1475.2,1114.5 \ 1459,1098 1451.4,1090.3 1445.5,1095.2 1436,1090 1433.8,1088.8 1402.1,1064.2 1401,1062 1399.3,1058.4 1398.4,1056.1 1401,1053 1413.4,\ 1038.1 1431.6,1059.9 1444,1045 1449.7,1038.2 1450,1031.6 1444,1025 1431.1,1010.8 1372.8,1029.2 1358,1017 1329.9,993.84 1333.7,961.28 \ 1359,935 1373.4,920.04 1386,935.37 1405,927 1458.2,903.55 1454.6,870.22 1507,845 1539,829.62 1549.8,832.57 1585,828 1625.4,822.76 \ 1728.7,830.66 1768,820 1793.7,813.03 1807.2,814.82 1821,792 1823.1,788.57 1823.6,786.05 1821,783 1817.4,778.81 1794.3,774.8 1770.7,\ 771.73"]; spurious_annot_final [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2796 575.5 2796 594.5 2918 594.5 2918 575.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2857 582.5 0 106 20 -spurious_annot pass2 ", fillcolor="#F3CEA1", height=0.27778, label="spurious_annot pass2", pos="2857,585", rects="2796,575.5,2918,594.5", width=1.6944]; scatter_gather_nchunks -> spurious_annot_final [_draw_="c 7 -#000000 B 34 1601.75 1258.55 1614.56 1255.2 1629.91 1251.73 1644 1250 1743.37 1237.82 2444.9 1243.7 2545 1242 2846.38 1236.88 \ 2923.32 1257.39 3223 1225 3393.55 1206.57 3492.77 1284.27 3602 1152 3630.15 1117.92 3594.52 1102.13 3511 1008 3476.37 968.97 3455.73 \ 969.89 3426 927 3411.14 905.56 3422.78 890.01 3403 873 3392.21 863.72 3385.39 869.8 3372 865 3282.91 833.04 3243.25 844.49 3179 \ 775 3122.85 714.28 3180.86 642.12 3108 603 3092.31 594.57 2994.71 589.98 2925.95 587.76 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2926.3 585.32 2919.23 587.55 2926.15 590.22 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3475 920.6 0 98 22 -scatter_gather_nchunks ", label=scatter_gather_nchunks, lp="3475,922.5", pos="e,2917.7,587.5 1601.7,1258.6 1614.6,1255.2 1629.9,1251.7 1644,1250 1743.4,1237.8 2444.9,1243.7 2545,1242 2846.4,1236.9 2923.3,1257.4 \ 3223,1225 3393.5,1206.6 3492.8,1284.3 3602,1152 3630.1,1117.9 3594.5,1102.1 3511,1008 3476.4,968.97 3455.7,969.89 3426,927 3411.1,\ 905.56 3422.8,890.01 3403,873 3392.2,863.72 3385.4,869.8 3372,865 3282.9,833.04 3243.3,844.49 3179,775 3122.9,714.28 3180.9,642.12 \ 3108,603 3092.3,594.57 2994.7,589.98 2925.9,587.76"]; scatter_gather_nchunks -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 46 1542.9 1258.54 1530.62 1255.4 1516.22 1252.08 1503 1250 1355.52 1226.75 1316.42 1241.24 1168 1225 1053.72 1212.49 \ 1025.81 1204.21 912 1188 899.34 1186.2 863.56 1189.5 855 1180 846.66 1170.75 854.22 1164.45 854 1152 853.21 1107.74 835.61 1086.11 \ 865 1053 910.26 1002.02 935.92 1004.3 983 955 1000.31 936.87 1004.68 931.83 1017 910 1021.71 901.66 1017.63 896.11 1025 890 1039.3 \ 878.16 1048.46 888.09 1066 882 1081.59 876.59 1085.84 874.96 1099 865 1120.82 848.49 1129.29 844.73 1141 820 1156.73 786.77 1143.53 \ 773.78 1152 738 1171.5 655.66 1145.37 607.49 1214 558 1228.37 547.64 2209.92 543.12 2649.32 541.62 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2649.17 544.07 2656.16 541.59 2649.15 539.17 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1074 898.1 0 98 22 -scatter_gather_nchunks ", label=scatter_gather_nchunks, lp="1074,900", pos="e,2657.7,541.59 1542.9,1258.5 1530.6,1255.4 1516.2,1252.1 1503,1250 1355.5,1226.7 1316.4,1241.2 1168,1225 1053.7,1212.5 1025.8,1204.2 \ 912,1188 899.34,1186.2 863.56,1189.5 855,1180 846.66,1170.8 854.22,1164.5 854,1152 853.21,1107.7 835.61,1086.1 865,1053 910.26,1002 \ 935.92,1004.3 983,955 1000.3,936.87 1004.7,931.83 1017,910 1021.7,901.66 1017.6,896.11 1025,890 1039.3,878.16 1048.5,888.09 1066,\ 882 1081.6,876.59 1085.8,874.96 1099,865 1120.8,848.49 1129.3,844.73 1141,820 1156.7,786.77 1143.5,773.78 1152,738 1171.5,655.66 \ 1145.4,607.49 1214,558 1228.4,547.64 2209.9,543.12 2649.3,541.62"]; scatter_gather_nchunks -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 49 1567.62 1258.62 1558 1243.39 1537.59 1210 1524 1180 1516.81 1164.12 1518.41 1158.78 1511 1143 1501.08 1121.89 \ 1501.11 1113.85 1484 1098 1478.17 1092.6 1473.45 1095.78 1468 1090 1458.71 1080.15 1458.72 1075.26 1456 1062 1455.2 1058.08 1454.36 \ 1056.65 1456 1053 1458.19 1048.12 1462.39 1049.67 1465 1045 1473.11 1030.52 1481.08 1020.36 1470 1008 1459.11 995.85 1407.89 1012.15 \ 1397 1000 1391.07 993.38 1391.69 987.13 1397 980 1420.29 948.77 1447.92 975.56 1481 955 1509.31 937.4 1552.8 859.12 1583 845 1598.52 \ 837.74 1719.93 838.47 1737 837 1737.98 836.92 1877.33 820.73 1878 820 1886.98 810.23 1892.08 752.9 1879 738 1877.24 736 1874.72 \ 734.22 1871.58 732.64 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1872.62 730.41 1865.21 730.06 1870.78 734.96 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1446 988.1 0 98 22 -scatter_gather_nchunks ", label=scatter_gather_nchunks, lp="1446,990", pos="e,1863.8,729.49 1567.6,1258.6 1558,1243.4 1537.6,1210 1524,1180 1516.8,1164.1 1518.4,1158.8 1511,1143 1501.1,1121.9 1501.1,1113.8 \ 1484,1098 1478.2,1092.6 1473.5,1095.8 1468,1090 1458.7,1080.1 1458.7,1075.3 1456,1062 1455.2,1058.1 1454.4,1056.6 1456,1053 1458.2,\ 1048.1 1462.4,1049.7 1465,1045 1473.1,1030.5 1481.1,1020.4 1470,1008 1459.1,995.85 1407.9,1012.2 1397,1000 1391.1,993.38 1391.7,\ 987.13 1397,980 1420.3,948.77 1447.9,975.56 1481,955 1509.3,937.4 1552.8,859.12 1583,845 1598.5,837.74 1719.9,838.47 1737,837 1738,\ 836.92 1877.3,820.73 1878,820 1887,810.23 1892.1,752.9 1879,738 1877.2,736 1874.7,734.22 1871.6,732.64"]; orfs_hmms [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1410 800.5 1410 819.5 1766 819.5 1766 800.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1588 807.5 0 340 69 -Bacterial Annotation, pass 1, genemark training, by HMMs (first pass) ", fillcolor="#F3CEA1", height=0.27778, label="Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)", pos="1588,810", rects="1410,800.5,1766,819.5", width=4.9444]; scatter_gather_nchunks -> orfs_hmms [_draw_="c 7 -#000000 B 37 1536.72 1258.53 1512.72 1252.7 1484.82 1245.43 1480 1242 1461.16 1228.61 1378.84 1086.83 1363 1070 1354.53 1061 \ 1352.5 1057.53 1341 1053 1323.14 1045.96 1267.93 1059.19 1255 1045 1249.01 1038.43 1251.6 1033.21 1255 1025 1259.09 1015.13 1262.74 \ 1013.34 1272 1008 1283.95 1001.11 1290.69 1007.91 1302 1000 1310.89 993.78 1309.74 988.87 1316 980 1330.15 959.95 1327.22 948.05 \ 1348 935 1365.95 923.73 1376.62 937.54 1395 927 1444.8 898.43 1427.98 856.19 1478 828 1482.7 825.35 1490.59 823.05 1500.05 821.07 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1500.43 823.49 1506.84 819.76 1499.5 818.68 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1304 1033.1 0 98 22 -scatter_gather_nchunks ", label=scatter_gather_nchunks, lp="1304,1035", pos="e,1508.3,819.48 1536.7,1258.5 1512.7,1252.7 1484.8,1245.4 1480,1242 1461.2,1228.6 1378.8,1086.8 1363,1070 1354.5,1061 1352.5,1057.5 \ 1341,1053 1323.1,1046 1267.9,1059.2 1255,1045 1249,1038.4 1251.6,1033.2 1255,1025 1259.1,1015.1 1262.7,1013.3 1272,1008 1284,1001.1 \ 1290.7,1007.9 1302,1000 1310.9,993.78 1309.7,988.87 1316,980 1330.1,959.95 1327.2,948.05 1348,935 1365.9,923.73 1376.6,937.54 1395,\ 927 1444.8,898.43 1428,856.19 1478,828 1482.7,825.35 1490.6,823.05 1500,821.07"]; uuid_in -> ping_start [_draw_="c 7 -#000000 B 10 838.31 1258.58 833.12 1255.48 826.96 1252.19 821 1250 803.16 1243.45 791.11 1256.64 779 1242 776.13 1238.53 776.93 \ 1234.5 779.28 1230.66 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 781.15 1232.23 783.75 1225.29 777.39 1229.1 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 794 1235.6 0 30 7 -uuid_in ", label=uuid_in, lp="794,1237.5", pos="e,784.72,1224.1 838.31,1258.6 833.12,1255.5 826.96,1252.2 821,1250 803.16,1243.5 791.11,1256.6 779,1242 776.13,1238.5 776.93,1234.5 \ 779.28,1230.7"]; make_uuid -> ping_start [_draw_="c 7 -#000000 B 10 899.29 1258.5 892.52 1255.39 884.54 1252.11 877 1250 851.52 1242.87 841.34 1254.47 818 1242 813.05 1239.35 808.65 \ 1235.19 805.07 1230.96 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 807.24 1229.77 801.05 1225.68 803.34 1232.74 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 840.5 1235.6 0 45 9 -make_uuid ", label=make_uuid, lp="840.5,1237.5", pos="e,800.13,1224.5 899.29,1258.5 892.52,1255.4 884.54,1252.1 877,1250 851.52,1242.9 841.34,1254.5 818,1242 813.05,1239.4 808.65,1235.2 \ 805.07,1231"]; genomic_source [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1007.5 1160.5 1007.5 1179.5 1322.5 1179.5 1322.5 1160.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1165 1167.5 0 299 61 -Create Genomic Collection for Bacterial Pipeline, ASN.1 input ", fillcolor="#F3CEA1", height=0.27778, label="Create Genomic Collection for Bacterial Pipeline, ASN.1 input", pos="1165,1170", rects="1007.5,1160.5,1322.5,1179.5", width=4.375]; entries -> genomic_source [_draw_="c 7 -#000000 B 4 1175.06 1258.82 1173.26 1243.09 1169.29 1208.4 1166.91 1187.63 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1169.37 1187.62 1166.14 1180.94 1164.5 1188.17 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1185.5 1213.1 0 29 7 -entries ", label=entries, lp="1185.5,1215", pos="e,1166,1179.4 1175.1,1258.8 1173.3,1243.1 1169.3,1208.4 1166.9,1187.6"]; Add_Locus_Tags [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1742 485.5 1742 504.5 1834 504.5 1834 485.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1788 492.5 0 76 14 -add_locus_tags ", height=0.27778, label=add_locus_tags, pos="1788,495", rects="1742,485.5,1834,504.5", width=1.2778]; locus_tag_prefix -> Add_Locus_Tags [_draw_="c 7 -#000000 B 25 1074.81 1258.54 1066.1 1255.64 1056.16 1252.5 1047 1250 996.48 1236.24 825 1223.36 825 1171 825 1171 825 1171 \ 825 1034 825 959.2 827.62 931.68 874 873 913.89 822.53 942.42 830.62 999 800 1020.85 788.17 1032.76 793.8 1049 775 1079.69 739.48 \ 1081.9 606.17 1117 575 1162.89 534.25 1582.24 507.33 1733.73 498.86 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1733.66 501.32 1740.51 498.48 1733.39 496.42 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 907.5 875.6 0 67 16 -locus_tag_prefix ", label=locus_tag_prefix, lp="907.5,877.5", pos="e,1742,498.4 1074.8,1258.5 1066.1,1255.6 1056.2,1252.5 1047,1250 996.48,1236.2 825,1223.4 825,1171 825,1171 825,1171 825,1034 825,\ 959.2 827.62,931.68 874,873 913.89,822.53 942.42,830.62 999,800 1020.8,788.17 1032.8,793.8 1049,775 1079.7,739.48 1081.9,606.17 \ 1117,575 1162.9,534.25 1582.2,507.33 1733.7,498.86"]; seq_submit -> genomic_source [_draw_="c 7 -#000000 B 7 1237.26 1258.55 1230.15 1246.21 1215.95 1222.78 1201 1205 1195.02 1197.89 1187.68 1190.73 1181.19 1184.83 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1183.06 1183.21 1176.2 1180.39 1179.81 1186.87 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1239.5 1213.1 0 47 10 -seq_submit ", label=seq_submit, lp="1239.5,1215", pos="e,1175.1,1179.4 1237.3,1258.6 1230.1,1246.2 1215.9,1222.8 1201,1205 1195,1197.9 1187.7,1190.7 1181.2,1184.8"]; xpath_fail_initial_asndisc -> Prepare_Unannotated_Sequences_asndisc_evaluate [_draw_="c 7 -#000000 B 16 1690.89 1258.68 1683.52 1254.81 1676.19 1249.38 1672 1242 1653.99 1210.32 1660.88 1194.71 1672 1160 1688.33 1109.03 \ 1711.26 1105.82 1742 1062 1757.89 1039.35 1791.47 1028.61 1773 1008 1763.38 997.27 1726.43 1001.17 1703.43 1000 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1703.8 997.57 1696.61 999.36 1703.35 1002.45 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1715 1123.1 0 40 10 -xpath_fail ", label=xpath_fail, lp="1715,1125", pos="e,1695.1,999.22 1690.9,1258.7 1683.5,1254.8 1676.2,1249.4 1672,1242 1654,1210.3 1660.9,1194.7 1672,1160 1688.3,1109 1711.3,1105.8 \ 1742,1062 1757.9,1039.3 1791.5,1028.6 1773,1008 1763.4,997.27 1726.4,1001.2 1703.4,1000"]; blast_hits_cache_data_split_dir [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3310.5 800.5 3310.5 819.5 3515.5 819.5 3515.5 800.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3413 807.5 0 189 40 -Split input directory into subpath flows ", height=0.27778, label="Split input directory into subpath flows", pos="3413,810", rects="3310.5,800.5,3515.5,819.5", width=2.8472]; blast_hits_cache_data -> blast_hits_cache_data_split_dir [_draw_="c 7 -#000000 B 22 2158.09 1258.53 2170.18 1255.17 2184.67 1251.7 2198 1250 2208.35 1248.68 3693.64 1249.4 3701 1242 3726.98 1215.89 \ 3716.75 1184.22 3689 1160 3678.93 1151.21 3670.78 1159.91 3660 1152 3644.37 1140.54 3647.07 1173.83 3597 1045 3568.64 972.03 3607.54 \ 934.42 3559 873 3537.45 845.73 3501.66 830.28 3470.91 821.62 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3471.65 819.28 3464.26 819.85 3470.39 824.02 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3606.5 1033.1 0 19 4 -data ", label=data, lp="3606.5,1035", pos="e,3462.8,819.46 2158.1,1258.5 2170.2,1255.2 2184.7,1251.7 2198,1250 2208.4,1248.7 3693.6,1249.4 3701,1242 3727,1215.9 3716.8,1184.2 \ 3689,1160 3678.9,1151.2 3670.8,1159.9 3660,1152 3644.4,1140.5 3647.1,1173.8 3597,1045 3568.6,972.03 3607.5,934.42 3559,873 3537.4,\ 845.73 3501.7,830.28 3470.9,821.62"]; Final_Bacterial_Package_dumb_down_as_required [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 723 305.5 723 324.5 861 324.5 861 305.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 792 312.5 0 122 21 -dumb_down_as_required ", height=0.27778, label=dumb_down_as_required, pos="792,315", rects="723,305.5,861,324.5", width=1.9167]; submol_block_json -> Final_Bacterial_Package_dumb_down_as_required [_draw_="c 7 -#000000 B 19 683.58 1258.73 685.35 1248.67 688 1231.16 688 1216 688 1216 688 1216 688 1056.5 688 934.65 688.2 903.39 707 783 \ 712.96 744.87 727 737.09 727 698.5 727 698.5 727 698.5 727 359 727 344.27 738.75 334.3 752.26 327.69 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 753.06 330.01 758.49 324.97 751.1 325.52 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 745.5 785.6 0 77 17 -submol_block_json ", label=submol_block_json, lp="745.5,787.5", pos="e,759.88,324.36 683.58,1258.7 685.35,1248.7 688,1231.2 688,1216 688,1216 688,1216 688,1056.5 688,934.65 688.2,903.39 707,783 712.96,\ 744.87 727,737.09 727,698.5 727,698.5 727,698.5 727,359 727,344.27 738.75,334.3 752.26,327.69"]; xpath_fail_final_asnvalidate -> Final_Bacterial_Package_asnvalidate_evaluate [_draw_="c 7 -#000000 B 10 219.31 1258.72 220.8 1248.65 223 1231.12 223 1216 223 1216 223 1216 223 179 223 167.34 230.84 157.09 239.09 149.52 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 240.4 151.62 244.2 145.25 237.26 147.86 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 243 695.6 0 40 10 -xpath_fail ", label=xpath_fail, lp="243,697.5", pos="e,245.36,144.28 219.31,1258.7 220.8,1248.7 223,1231.1 223,1216 223,1216 223,1216 223,179 223,167.34 230.84,157.09 239.09,149.52"]; passdata [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2488.5 1205.5 2488.5 1224.5 2693.5 1224.5 2693.5 1205.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2591 1212.5 0 189 40 -Split input directory into subpath flows ", height=0.27778, label="Split input directory into subpath flows", pos="2591,1215", rects="2488.5,1205.5,2693.5,1224.5", width=2.8472]; supplemental_data -> passdata [_draw_="c 7 -#000000 B 7 2033.99 1258.51 2044.39 1255.31 2056.66 1251.98 2068 1250 2208.87 1225.42 2373.88 1218.21 2480.3 1216.3 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2480.03 1218.76 2486.99 1216.19 2479.95 1213.86 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2190.5 1235.6 0 19 4 -data ", label=data, lp="2190.5,1237.5", pos="e,2488.5,1216.2 2034,1258.5 2044.4,1255.3 2056.7,1252 2068,1250 2208.9,1225.4 2373.9,1218.2 2480.3,1216.3"]; xpath_fail_final_asndisc -> Final_Bacterial_Package_asndisc_evaluate [_draw_="c 7 -#000000 B 10 365.47 1258.7 364.88 1248.61 364 1231.06 364 1216 364 1216 364 1216 364 179 364 170.31 364 160.63 364 152.65 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 366.45 152.76 364 145.76 361.55 152.76 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 384 695.6 0 40 10 -xpath_fail ", label=xpath_fail, lp="384,697.5", pos="e,364,144.24 365.47,1258.7 364.88,1248.6 364,1231.1 364,1216 364,1216 364,1216 364,179 364,170.31 364,160.63 364,152.65"]; Final_Bacterial_Package_ent2sqn [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 655 260.5 655 279.5 711 279.5 711 260.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 683 267.5 0 40 7 -ent2sqn ", height=0.27778, label=ent2sqn, pos="683,270", rects="655,260.5,711,279.5", width=0.77778]; contact_as_author_possible -> Final_Bacterial_Package_ent2sqn [_draw_="c 7 -#000000 B 22 551.37 1258.59 556.11 1248.68 563 1231.59 563 1216 563 1216 563 1216 563 741.5 563 718.8 569.6 713.66 579 693 \ 580.65 689.38 581.67 688.75 583 685 587.8 671.49 590 667.84 590 653.5 590 653.5 590 653.5 590 314 590 287.84 620.7 277.54 646.82 \ 273.52 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 646.98 275.97 653.6 272.62 646.34 271.11 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 620 763.1 0 114 26 -contact_as_author_possible ", label=contact_as_author_possible, lp="620,765", pos="e,655.1,272.42 551.37,1258.6 556.11,1248.7 563,1231.6 563,1216 563,1216 563,1216 563,741.5 563,718.8 569.6,713.66 579,693 580.65,\ 689.38 581.67,688.75 583,685 587.8,671.49 590,667.84 590,653.5 590,653.5 590,653.5 590,314 590,287.84 620.7,277.54 646.82,273.52"]; report_usage -> ping_start [_draw_="c 7 -#000000 B 13 759.55 1258.61 752.39 1255.84 744.36 1252.76 737 1250 727.26 1246.35 720.97 1250.52 715 1242 712.71 1238.72 712.48 \ 1236.11 715 1233 721.11 1225.45 743.52 1221.12 763.08 1218.72 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 763.32 1221.16 770 1217.94 762.78 1216.29 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 742.5 1235.6 0 55 12 -report_usage ", label=report_usage, lp="742.5,1237.5", pos="e,771.51,1217.8 759.55,1258.6 752.39,1255.8 744.36,1252.8 737,1250 727.26,1246.3 720.97,1250.5 715,1242 712.71,1238.7 712.48,1236.1 \ 715,1233 721.11,1225.5 743.52,1221.1 763.08,1218.7"]; ping_stop [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 753.5 125.5 753.5 144.5 800.5 144.5 800.5 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 777 132.5 0 31 6 -pinger ", height=0.27778, label=pinger, pos="777,135", rects="753.5,125.5,800.5,144.5", width=0.65278]; report_usage -> ping_stop [_draw_="c 7 -#000000 B 19 762.04 1258.57 754.39 1255.46 745.4 1252.17 737 1250 683.35 1236.14 490 1271.41 490 1216 490 1216 490 1216 490 \ 269 490 260.77 574.69 156.76 582 153 597.73 144.91 723.5 147.6 741 145 742.4 144.79 743.83 144.55 745.27 144.29 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 745.67 146.71 752.03 142.88 744.67 141.91 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 517.5 695.6 0 55 12 -report_usage ", label=report_usage, lp="517.5,697.5", pos="e,753.51,142.57 762.04,1258.6 754.39,1255.5 745.4,1252.2 737,1250 683.35,1236.1 490,1271.4 490,1216 490,1216 490,1216 490,269 490,\ 260.77 574.69,156.76 582,153 597.73,144.91 723.5,147.6 741,145 742.4,144.79 743.83,144.55 745.27,144.29"]; Prepare_Unannotated_Sequences [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1183 1115.5 1183 1134.5 1359 1134.5 1359 1115.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1271 1122.5 0 160 29 -Prepare Unannotated Sequences ", height=0.27778, label="Prepare Unannotated Sequences", pos="1271,1125", rects="1183,1115.5,1359,1134.5", width=2.4444]; no_internet -> Prepare_Unannotated_Sequences [_draw_="c 7 -#000000 B 7 1325.37 1258.73 1341.15 1237.18 1378.72 1178.56 1350 1143 1348.19 1140.76 1344.94 1138.81 1340.75 1137.1 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1341.75 1134.85 1334.33 1134.93 1340.18 1139.49 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1382.5 1190.6 0 47 11 -no_internet ", label=no_internet, lp="1382.5,1192.5", pos="e,1332.9,1134.5 1325.4,1258.7 1341.1,1237.2 1378.7,1178.6 1350,1143 1348.2,1140.8 1344.9,1138.8 1340.7,1137.1"]; dbname -> Add_Locus_Tags [_draw_="c 7 -#000000 B 31 2253.94 1266.91 2455.11 1266.19 3675.37 1261.03 3708 1242 3779.36 1200.38 3620 1082.45 3620 1036 3620 1036 3620 \ 1036 3620 966.5 3620 927.92 3598.96 923.01 3579 890 3554 848.65 3549.06 837.02 3518 800 3472.14 745.34 3438.93 748.29 3406 685 3397.81 \ 669.26 3399.61 663.52 3391 648 3386.14 639.24 3346.25 580.69 3338 575 3154.9 448.87 2508.97 514.82 2441 513 2218.92 507.06 1954.35 \ 500.26 1842.36 497.39 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1842.49 494.94 1835.43 497.21 1842.37 499.84 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3591 875.6 0 34 6 -dbname ", label=dbname, lp="3591,877.5", pos="e,1833.9,497.17 2253.9,1266.9 2455.1,1266.2 3675.4,1261 3708,1242 3779.4,1200.4 3620,1082.5 3620,1036 3620,1036 3620,1036 3620,966.5 \ 3620,927.92 3599,923.01 3579,890 3554,848.65 3549.1,837.02 3518,800 3472.1,745.34 3438.9,748.29 3406,685 3397.8,669.26 3399.6,663.52 \ 3391,648 3386.1,639.24 3346.3,580.69 3338,575 3154.9,448.87 2509,514.82 2441,513 2218.9,507.06 1954.3,500.26 1842.4,497.39"]; Generate_Annotation_Reports_prot_fasta [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 784.5 170.5 784.5 189.5 849.5 189.5 849.5 170.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 817 177.5 0 49 9 -asn2fasta ", height=0.27778, label=asn2fasta, pos="817,180", rects="784.5,170.5,849.5,189.5", width=0.90278]; Generate_Annotation_Reports_prot_fasta -> protein_fasta [_draw_="c 7 -#000000 B 4 830.05 170.65 856.31 153.84 915.7 115.83 946.94 95.84 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 948.02 98.05 952.6 92.22 945.38 93.93 ", pos="e,953.87,91.4 830.05,170.65 856.31,153.84 915.7,115.83 946.94,95.841"]; Generate_Annotation_Reports_prot_fasta -> ping_stop [_draw_="c 7 -#000000 B 7 813 170.68 810.14 165.27 805.93 158.26 801 153 799.9 151.83 798.71 150.68 797.46 149.58 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 799.18 147.82 792.16 145.41 796.14 151.66 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 817.5 155.6 0 21 6 -infile ", label=infile, lp="817.5,157.5", pos="e,790.97,144.47 813,170.68 810.14,165.27 805.93,158.26 801,153 799.9,151.83 798.71,150.68 797.46,149.58"]; Generate_Annotation_Reports_cds_prot_fasta [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1061.5 125.5 1061.5 144.5 1126.5 144.5 1126.5 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1094 132.5 0 49 9 -asn2fasta ", height=0.27778, label=asn2fasta, pos="1094,135", rects="1061.5,125.5,1126.5,144.5", width=0.90278]; Generate_Annotation_Reports_cds_prot_fasta -> cds_protein_fasta [_draw_="c 7 -#000000 B 4 1114.31 125.58 1134.7 117.13 1166.26 104.04 1189.01 94.61 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1189.73 96.96 1195.26 92.01 1187.86 92.43 ", pos="e,1196.7,91.434 1114.3,125.58 1134.7,117.13 1166.3,104.04 1189,94.605"]; Prepare_Unannotated_Sequences_asnvalidate [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1498 1025.5 1498 1044.5 1572 1044.5 1572 1025.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1535 1032.5 0 58 11 -asnvalidate ", height=0.27778, label=asnvalidate, pos="1535,1035", rects="1498,1025.5,1572,1044.5", width=1.0278]; Prepare_Unannotated_Sequences_asnvalidate -> Prepare_Unannotated_Sequences_asnvalidate_evaluate [_draw_="c 7 -#000000 B 13 1571.86 1027.64 1577.59 1026.71 1583.45 1025.8 1589 1025 1617.81 1020.83 1627 1027.88 1654 1017 1660.18 1014.51 \ 1659.95 1010.8 1666 1008 1668.86 1006.68 1679.81 1004.02 1692.49 1001.19 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1692.77 1003.64 1699.08 999.74 1691.72 998.85 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1677 1010.6 0 22 5 -input ", label=input, lp="1677,1012.5", pos="e,1700.6,999.41 1571.9,1027.6 1577.6,1026.7 1583.5,1025.8 1589,1025 1617.8,1020.8 1627,1027.9 1654,1017 1660.2,1014.5 1659.9,1010.8 \ 1666,1008 1668.9,1006.7 1679.8,1004 1692.5,1001.2"]; Validate_Annotation_collect_annot_stats [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3618.5 0.5 3618.5 19.5 3729.5 19.5 3729.5 0.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3674 7.5 0 95 19 -collect_annot_stats ", height=0.27778, label=collect_annot_stats, pos="3674,10", rects="3618.5,0.5,3729.5,19.5", width=1.5417]; Validate_Annotation_collect_annot_stats -> all_proc_annot_stats [_draw_="c 7 -#000000 B 7 3618.72 10.97 3261.33 10.84 1288.22 11.65 1166 45 1149.49 49.5 1132.77 59.36 1120.71 67.62 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1119.36 65.57 1115.07 71.62 1122.2 69.57 ", pos="e,1113.8,72.5 3618.7,10.965 3261.3,10.838 1288.2,11.653 1166,45 1149.5,49.503 1132.8,59.361 1120.7,67.624"]; Validate_Annotation_proc_annot_stats [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3544 260.5 3544 279.5 3644 279.5 3644 260.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3594 267.5 0 84 16 -proc_annot_stats ", height=0.27778, label=proc_annot_stats, pos="3594,270", rects="3544,260.5,3644,279.5", width=1.3889]; Validate_Annotation_proc_annot_stats -> proc_annot_stats [_draw_="c 7 -#000000 B 10 3559.2 260.61 3542.47 254.29 3526 243.6 3526 226 3526 226 3526 226 3526 134 3526 83.49 1892.73 82.57 1561.26 82.91 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1561.27 80.46 1554.27 82.92 1561.27 85.36 ", pos="e,1552.8,82.918 3559.2,260.61 3542.5,254.29 3526,243.6 3526,226 3526,226 3526,226 3526,134 3526,83.492 1892.7,82.575 1561.3,82.909"]; Validate_Annotation_proc_annot_stats -> Validate_Annotation_collect_annot_stats [_draw_="c 7 -#000000 B 16 3596.9 260.83 3601.02 249.81 3609.3 229.86 3620 215 3646.08 178.78 3668.47 182.93 3692 145 3698.89 133.89 3698.6 \ 129.85 3701 117 3708.28 78.08 3719.69 60.45 3697 28 3696.29 26.98 3695.5 26 3694.65 25.06 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3696.39 23.34 3689.56 20.46 3693.11 26.97 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3697 155.6 0 22 5 -input ", label=input, lp="3697,157.5", pos="e,3688.4,19.441 3596.9,260.83 3601,249.81 3609.3,229.86 3620,215 3646.1,178.78 3668.5,182.93 3692,145 3698.9,133.89 3698.6,129.85 \ 3701,117 3708.3,78.079 3719.7,60.451 3697,28 3696.3,26.983 3695.5,26.002 3694.6,25.06"]; Validate_Annotation_collect_annot_details [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3620.5 215.5 3620.5 234.5 3731.5 234.5 3731.5 215.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3676 222.5 0 95 19 -collect_annot_stats ", height=0.27778, label=collect_annot_stats, pos="3676,225", rects="3620.5,215.5,3731.5,234.5", width=1.5417]; Validate_Annotation_proc_annot_stats -> Validate_Annotation_collect_annot_details [_draw_="c 7 -#000000 B 4 3610.2 260.5 3622.33 254.14 3639.1 245.35 3652.67 238.23 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3653.43 240.6 3658.49 235.18 3651.16 236.26 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3653 245.6 0 22 5 -input ", label=input, lp="3653,247.5", pos="e,3659.8,234.48 3610.2,260.5 3622.3,254.14 3639.1,245.35 3652.7,238.23"]; add_checksum_sqn [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 410 125.5 410 144.5 522 144.5 522 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 466 132.5 0 96 16 -add_checksum_sqn ", height=0.27778, label=add_checksum_sqn, pos="466,135", rects="410,125.5,522,144.5", width=1.5556]; Final_Bacterial_Package_ent2sqn -> add_checksum_sqn [_draw_="c 7 -#000000 B 7 655.24 268.52 622.29 266.76 566.81 259.95 527 235 496.49 215.89 478.89 175.36 471.01 152.53 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 473.35 151.8 468.85 145.91 468.69 153.32 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 508 200.6 0 22 5 -input ", label=input, lp="508,202.5", pos="e,468.38,144.47 655.24,268.52 622.29,266.76 566.81,259.95 527,235 496.49,215.89 478.89,175.36 471.01,152.53"]; Final_Bacterial_Package_std_validation [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 854 170.5 854 189.5 940 189.5 940 170.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 897 177.5 0 70 14 -std_validation ", height=0.27778, label=std_validation, pos="897,180", rects="854,170.5,940,189.5", width=1.1944]; Final_Bacterial_Package_ent2sqn -> Final_Bacterial_Package_std_validation [_draw_="c 7 -#000000 B 10 699.24 260.56 703.8 257.99 708.69 255.03 713 252 744 230.19 743.72 211.86 779 198 806.13 187.34 816.82 193.53 \ 845.97 190.41 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 846.12 192.86 852.74 189.53 845.49 188 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 762.5 223.1 0 23 5 -insqn ", label=insqn, lp="762.5,225", pos="e,854.25,189.33 699.24,260.56 703.8,257.99 708.69,255.03 713,252 744,230.19 743.72,211.86 779,198 806.13,187.34 816.82,193.53 845.97,\ 190.41"]; Final_Bacterial_Package_sqn2gbent [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 662 215.5 662 234.5 730 234.5 730 215.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 696 222.5 0 52 9 -sqn2gbent ", height=0.27778, label=sqn2gbent, pos="696,225", rects="662,215.5,730,234.5", width=0.94444]; Final_Bacterial_Package_ent2sqn -> Final_Bacterial_Package_sqn2gbent [_draw_="c 7 -#000000 B 4 685.51 260.71 687.09 255.47 689.19 248.53 691.09 242.24 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 693.38 243.12 693.06 235.71 688.69 241.71 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 701 245.6 0 22 5 -input ", label=input, lp="701,247.5", pos="e,693.5,234.27 685.51,260.71 687.09,255.47 689.19,248.53 691.09,242.24"]; ping_start -> genomic_source [_draw_="c 7 -#000000 B 4 818.43 1211.28 870.7 1205.2 998.92 1190.3 1083.89 1180.43 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1084.05 1182.87 1090.72 1179.63 1083.49 1178.01 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1044.5 1190.6 0 63 12 -gc_assm_name ", label=gc_assm_name, lp="1044.5,1192.5", pos="e,1092.2,1179.5 818.43,1211.3 870.7,1205.2 998.92,1190.3 1083.9,1180.4"]; ping_start -> ping_stop [_draw_="c 7 -#000000 B 31 771.77 1212.1 746.61 1208.62 710 1198.78 710 1171 710 1171 710 1171 710 1101.5 710 941.62 599.39 929.69 559 775 \ 527.64 654.89 572 620.13 572 496 572 496 572 496 572 404 572 350.63 591.72 210.9 626 170 631.11 163.91 635.03 165.83 642 162 648.82 \ 158.26 649.61 155.43 657 153 692.63 141.29 704.04 151.34 741 145 742.57 144.73 744.18 144.43 745.79 144.1 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 746.08 146.55 752.39 142.65 745.03 141.76 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 564 673.1 0 30 7 -uuid_in ", label=uuid_in, lp="564,675", pos="e,753.87,142.33 771.77,1212.1 746.61,1208.6 710,1198.8 710,1171 710,1171 710,1171 710,1101.5 710,941.62 599.39,929.69 559,775 527.64,\ 654.89 572,620.13 572,496 572,496 572,496 572,404 572,350.63 591.72,210.9 626,170 631.11,163.91 635.03,165.83 642,162 648.82,158.26 \ 649.61,155.43 657,153 692.63,141.29 704.04,151.34 741,145 742.57,144.73 744.18,144.43 745.79,144.1"]; Final_Bacterial_Package_asnvalidate_evaluate -> final_asnval_error_diag [_draw_="c 7 -#000000 B 4 228.77 125.58 198.54 116.87 151.23 103.23 118.31 93.75 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 119.13 91.44 111.73 91.85 117.77 96.15 ", pos="e,110.27,91.434 228.77,125.58 198.54,116.87 151.23,103.23 118.31,93.75"]; Prepare_Unannotated_Sequences_asnvalidate_evaluate -> initial_asnval_error_diag [_draw_="c 7 -#000000 B 46 1699.83 980.6 1698.54 980.39 1697.26 980.19 1696 980 1660.66 974.71 1649.85 983.45 1616 972 1579.89 959.79 1575.38 \ 947.1 1543 927 1505.87 903.95 1409.63 850.15 1378 820 1349.97 793.29 1347.56 782.19 1320 755 1221.11 657.42 1156.34 668.62 1084 \ 550 1071.02 528.72 1045.92 459.05 1062 440 1075.67 423.81 1095.33 448.19 1109 432 1111.58 428.94 1109.97 426.88 1109 423 1099.7 \ 385.8 1094.08 372.46 1063 350 1015.31 315.54 870.91 274.94 814 260 769.97 248.44 757.95 250.18 713 243 659.27 234.42 639.07 240.24 \ 596 207 568.19 185.54 560.37 177.48 547 145 541.03 130.49 539.57 112.55 539.43 99.71 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 541.88 99.92 539.51 92.9 536.98 99.87 ", pos="e,539.52,91.382 1699.8,980.6 1698.5,980.39 1697.3,980.19 1696,980 1660.7,974.71 1649.9,983.45 1616,972 1579.9,959.79 1575.4,947.1 \ 1543,927 1505.9,903.95 1409.6,850.15 1378,820 1350,793.29 1347.6,782.19 1320,755 1221.1,657.42 1156.3,668.62 1084,550 1071,528.72 \ 1045.9,459.05 1062,440 1075.7,423.81 1095.3,448.19 1109,432 1111.6,428.94 1110,426.88 1109,423 1099.7,385.8 1094.1,372.46 1063,350 \ 1015.3,315.54 870.91,274.94 814,260 769.97,248.44 757.95,250.18 713,243 659.27,234.42 639.07,240.24 596,207 568.19,185.54 560.37,\ 177.48 547,145 541.03,130.49 539.57,112.55 539.43,99.711"]; Cache_Entrez_Gene [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1369.5 935.5 1369.5 954.5 1478.5 954.5 1478.5 935.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1424 942.5 0 93 17 -Cache Entrez Gene ", height=0.27778, label="Cache Entrez Gene", pos="1424,945", rects="1369.5,935.5,1478.5,954.5", width=1.5139]; Prepare_Unannotated_Sequences_asnvalidate_evaluate -> Cache_Entrez_Gene [_draw_="c 7 -#000000 B 10 1699.84 980.52 1698.55 980.33 1697.26 980.16 1696 980 1626.23 971.3 1607.65 981.63 1538 972 1524.24 970.1 1492.62 \ 962.8 1466.16 956.42 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1466.99 954.1 1459.61 954.83 1465.84 958.86 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1543.5 965.6 0 11 2 -go ", label=go, lp="1543.5,967.5", pos="e,1458.1,954.47 1699.8,980.52 1698.5,980.33 1697.3,980.16 1696,980 1626.2,971.3 1607.6,981.63 1538,972 1524.2,970.1 1492.6,962.8 \ 1466.2,956.42"]; Prepare_Unannotated_Sequences_asnvalidate_evaluate -> bacterial_trna [_draw_="c 7 -#000000 B 10 1772.47 980.55 1779.41 978.18 1786.6 975.33 1793 972 1798.91 968.92 1799.02 965.95 1805 963 1809.53 960.77 1814.4 \ 958.79 1819.34 957.05 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1819.79 959.48 1825.68 954.97 1818.27 954.82 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1810.5 965.6 0 11 2 -go ", label=go, lp="1810.5,967.5", pos="e,1827.1,954.5 1772.5,980.55 1779.4,978.18 1786.6,975.33 1793,972 1798.9,968.92 1799,965.95 1805,963 1809.5,960.77 1814.4,958.79 \ 1819.3,957.05"]; Prepare_Unannotated_Sequences_asnvalidate_evaluate -> protein_alignment [_draw_="c 7 -#000000 B 28 1699.81 980.71 1698.53 980.47 1697.25 980.23 1696 980 1674.73 976.1 1666.53 983.15 1648 972 1639.85 967.1 1640.56 \ 962.72 1635 955 1633.73 953.23 1592.63 891.45 1591 890 1536.89 841.68 1510.29 845.98 1440 828 1425.8 824.37 1419.35 829.28 1408 \ 820 1396 810.18 1393 804.01 1393 788.5 1393 788.5 1393 788.5 1393 719 1393 698.78 1484.72 688 1575.05 682.3 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1575.16 684.75 1582 681.87 1574.86 679.86 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1483.5 830.6 0 11 2 -go ", label=go, lp="1483.5,832.5", pos="e,1583.5,681.78 1699.8,980.71 1698.5,980.47 1697.3,980.23 1696,980 1674.7,976.1 1666.5,983.15 1648,972 1639.8,967.1 1640.6,962.72 \ 1635,955 1633.7,953.23 1592.6,891.45 1591,890 1536.9,841.68 1510.3,845.98 1440,828 1425.8,824.37 1419.3,829.28 1408,820 1396,810.18 \ 1393,804.01 1393,788.5 1393,788.5 1393,788.5 1393,719 1393,698.78 1484.7,688 1575.1,682.3"]; Prepare_Unannotated_Sequences_asnvalidate_evaluate -> orfs_hmms [_draw_="c 7 -#000000 B 19 1699.68 980.72 1678.58 976.48 1657.25 972.17 1657 972 1649.56 966.93 1650.51 962.79 1646 955 1636.74 939 1637.46 \ 933.24 1627 918 1617.56 904.25 1613.2 902.36 1602 890 1591.86 878.81 1584.49 879.07 1579 865 1574.26 852.84 1577.19 838.19 1580.93 \ 827.22 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1583.2 828.15 1583.43 820.74 1578.62 826.39 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1626.5 898.1 0 11 2 -go ", label=go, lp="1626.5,900", pos="e,1584,819.33 1699.7,980.72 1678.6,976.48 1657.2,972.17 1657,972 1649.6,966.93 1650.5,962.79 1646,955 1636.7,939 1637.5,933.24 1627,\ 918 1617.6,904.25 1613.2,902.36 1602,890 1591.9,878.81 1584.5,879.07 1579,865 1574.3,852.84 1577.2,838.19 1580.9,827.22"]; bacterial_noncoding [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2297 935.5 2297 954.5 2451 954.5 2451 935.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2374 942.5 0 138 26 -Non-Coding Bacterial Genes ", fillcolor="#F3CEA1", height=0.27778, label="Non-Coding Bacterial Genes", pos="2374,945", rects="2297,935.5,2451,954.5", width=2.1389]; Prepare_Unannotated_Sequences_asnvalidate_evaluate -> bacterial_noncoding [_draw_="c 7 -#000000 B 10 1782.18 982.2 1828.3 974.58 1897.05 963.28 1900 963 2046.07 949.35 2083.43 961.35 2230 955 2248.97 954.18 2269.32 \ 953.05 2288.58 951.88 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2288.71 954.33 2295.54 951.45 2288.41 949.43 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1905.5 965.6 0 11 2 -go ", label=go, lp="1905.5,967.5", pos="e,2297.1,951.35 1782.2,982.2 1828.3,974.58 1897,963.28 1900,963 2046.1,949.35 2083.4,961.35 2230,955 2249,954.18 2269.3,953.05 2288.6,\ 951.88"]; bacterial_ncrna [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2603 935.5 2603 954.5 2799 954.5 2799 935.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2701 942.5 0 180 32 -Run genomic CMsearch (Rfam rRNA) ", fillcolor="#F3CEA1", height=0.27778, label="Run genomic CMsearch (Rfam rRNA)", pos="2701,945", rects="2603,935.5,2799,954.5", width=2.7222]; Prepare_Unannotated_Sequences_asnvalidate_evaluate -> bacterial_ncrna [_draw_="c 7 -#000000 B 10 1782.35 987.92 1856.35 985.85 2016.28 980.73 2151 972 2196.41 969.06 2207.58 965.86 2253 963 2269.77 961.94 2467.82 \ 954.57 2594.91 949.89 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2594.76 952.35 2601.67 949.64 2594.58 947.45 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2258.5 965.6 0 11 2 -go ", label=go, lp="2258.5,967.5", pos="e,2603.2,949.59 1782.4,987.92 1856.4,985.85 2016.3,980.73 2151,972 2196.4,969.06 2207.6,965.86 2253,963 2269.8,961.94 2467.8,954.57 \ 2594.9,949.89"]; ab_initio_training [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 2026 890.5 2026 909.5 2382 909.5 2382 890.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2204 897.5 0 340 69 -Bacterial Annotation, pass 1, genemark training, by HMMs (first pass) ", fillcolor="#F3CEA1", height=0.27778, label="Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)", pos="2204,900", rects="2026,890.5,2382,909.5", width=4.9444]; Prepare_Unannotated_Sequences_asnvalidate_evaluate -> ab_initio_training [_draw_="c 7 -#000000 B 22 1726.55 980.52 1717.15 975.17 1704.54 968.3 1693 963 1683.92 958.83 1677.67 963.22 1672 955 1666.96 947.68 1665.91 \ 941.47 1672 935 1682.07 924.3 1790.03 931.57 1804 927 1811.03 924.7 1810.95 920.24 1818 918 1837.61 911.78 1982.45 910.9 2003 910 \ 2007.86 909.79 2012.79 909.57 2017.76 909.35 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2017.77 911.8 2024.66 909.04 2017.56 906.91 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1677.5 943.1 0 11 2 -go ", label=go, lp="1677.5,945", pos="e,2026.2,908.98 1726.6,980.52 1717.2,975.17 1704.5,968.3 1693,963 1683.9,958.83 1677.7,963.22 1672,955 1667,947.68 1665.9,941.47 \ 1672,935 1682.1,924.3 1790,931.57 1804,927 1811,924.7 1810.9,920.24 1818,918 1837.6,911.78 1982.4,910.9 2003,910 2007.9,909.79 2012.8,\ 909.57 2017.8,909.35"]; bacterial_mobile_elem [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1684.5 935.5 1684.5 954.5 1777.5 954.5 1777.5 935.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1731 942.5 0 77 14 -Execute CRISPR ", fillcolor="#F3CEA1", height=0.27778, label="Execute CRISPR", pos="1731,945", rects="1684.5,935.5,1777.5,954.5", width=1.2917]; Prepare_Unannotated_Sequences_asnvalidate_evaluate -> bacterial_mobile_elem [_draw_="c 7 -#000000 B 7 1723.81 980.65 1720.67 978.3 1717.82 975.43 1716 972 1714.09 968.39 1714.75 964.55 1716.6 960.97 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1718.56 962.44 1720.7 955.34 1714.6 959.55 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1721.5 965.6 0 11 2 -go ", label=go, lp="1721.5,967.5", pos="e,1721.6,954.11 1723.8,980.65 1720.7,978.3 1717.8,975.43 1716,972 1714.1,968.39 1714.8,964.55 1716.6,960.97"]; bacterial_annot_2nd_pass_genemark -> spurious_annot_final [_draw_="c 7 -#000000 B 7 2829.74 620.56 2834.89 618.34 2839.81 615.54 2844 612 2847.12 609.37 2849.57 605.8 2851.46 602.15 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2853.69 603.17 2854.15 595.77 2849.17 601.26 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2916 605.6 0 132 31 -Extract_Model_Proteins_proteins ", label=Extract_Model_Proteins_proteins, lp="2916,607.5", pos="e,2854.7,594.37 2829.7,620.56 2834.9,618.34 2839.8,615.54 2844,612 2847.1,609.37 2849.6,605.8 2851.5,602.15"]; bacterial_annot_2nd_pass_genemark -> spurious_annot_final [_draw_="c 7 -#000000 B 10 2953.2 620.51 2968.65 618.29 2979.79 615.51 2983 612 2985.7 609.05 2985.63 606.01 2983 603 2975.1 593.97 2951.19 \ 589.54 2926.29 587.44 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2926.5 585 2919.34 586.92 2926.14 589.88 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3042.5 605.6 0 115 27 -Extract_Model_Proteins_lds2 ", label=Extract_Model_Proteins_lds2, lp="3042.5,607.5", pos="e,2917.8,586.81 2953.2,620.51 2968.6,618.29 2979.8,615.51 2983,612 2985.7,609.05 2985.6,606.01 2983,603 2975.1,593.97 2951.2,589.54 \ 2926.3,587.44"]; bacterial_annot_2nd_pass_genemark -> spurious_annot_final [_draw_="c 7 -#000000 B 10 2673.2 620.51 2666.37 618.26 2661.04 615.46 2658 612 2655.36 608.99 2655.26 605.91 2658 603 2667.23 593.2 2756.82 \ 595.77 2788.93 594.89 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2788.79 597.35 2795.65 594.54 2788.54 592.46 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2720.5 605.6 0 125 29 -Extract_Model_Proteins_seqids ", label=Extract_Model_Proteins_seqids, lp="2720.5,607.5", pos="e,2797.2,594.46 2673.2,620.51 2666.4,618.26 2661,615.46 2658,612 2655.4,608.99 2655.3,605.91 2658,603 2667.2,593.2 2756.8,595.77 \ 2788.9,594.89"]; bacterial_annot_2nd_pass_genemark -> spurious_annot_final [_draw_="c 7 -#000000 B 7 2785.6 620.89 2784.47 615.28 2784.1 607.97 2788 603 2789.71 600.82 2792.93 598.89 2797.09 597.17 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2797.62 599.58 2803.44 594.99 2796.03 594.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2815.5 605.6 0 55 12 -input_models ", label=input_models, lp="2815.5,607.5", pos="e,2804.9,594.5 2785.6,620.89 2784.5,615.28 2784.1,607.97 2788,603 2789.7,600.82 2792.9,598.89 2797.1,597.17"]; Validate_Annotation_bact_univ_prot_stats [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3581 305.5 3581 324.5 3699 324.5 3699 305.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3640 312.5 0 102 20 -bact_univ_prot_stats ", height=0.27778, label=bact_univ_prot_stats, pos="3640,315", rects="3581,305.5,3699,324.5", width=1.6389]; bacterial_annot_2nd_pass_genemark -> Validate_Annotation_bact_univ_prot_stats [_draw_="c 7 -#000000 B 13 3037.71 620.52 3064.14 618.31 3086.59 615.52 3101 612 3279.43 568.42 3332.7 550.53 3473 432 3522.74 389.98 3524.21 \ 364.86 3581 333 3584.89 330.82 3589.09 328.89 3593.39 327.2 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3594.01 329.58 3599.77 324.91 3592.35 324.97 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3454 470.6 0 52 10 -hmm_search ", label=hmm_search, lp="3454,472.5", pos="e,3601.2,324.4 3037.7,620.52 3064.1,618.31 3086.6,615.52 3101,612 3279.4,568.42 3332.7,550.53 3473,432 3522.7,389.98 3524.2,364.86 \ 3581,333 3584.9,330.82 3589.1,328.89 3593.4,327.2"]; bacterial_annot_2nd_pass_genemark -> Validate_Annotation_bact_univ_prot_stats [_draw_="c 7 -#000000 B 16 3035.05 620.5 3064.41 618.29 3093.91 615.5 3122 612 3160.23 607.23 3169.48 603.74 3207 595 3282.7 577.37 3303.7 \ 578.54 3376 550 3454.79 518.89 3481.29 516.95 3544 460 3586.51 421.39 3619.06 360.16 3632.82 331.61 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3634.92 332.91 3635.69 325.54 3630.49 330.82 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3579 470.6 0 90 19 -hmm_search_proteins ", label=hmm_search_proteins, lp="3579,472.5", pos="e,3636.3,324.17 3035.1,620.5 3064.4,618.29 3093.9,615.5 3122,612 3160.2,607.23 3169.5,603.74 3207,595 3282.7,577.37 3303.7,578.54 \ 3376,550 3454.8,518.89 3481.3,516.95 3544,460 3586.5,421.39 3619.1,360.16 3632.8,331.61"]; bacterial_annot_2nd_pass_genemark -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 16 2669.16 620.55 2662.37 618.28 2657.06 615.47 2654 612 2651.36 609 2651.29 605.94 2654 603 2668.5 587.25 2732.27 \ 607 2750 595 2758.23 589.43 2752.53 581.56 2760 575 2772.16 564.33 2787.85 556.96 2803.1 551.89 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2803.61 554.29 2809.57 549.89 2802.16 549.61 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2777 583.1 0 34 8 -proteins ", label=proteins, lp="2777,585", pos="e,2811,549.44 2669.2,620.55 2662.4,618.28 2657.1,615.47 2654,612 2651.4,609 2651.3,605.94 2654,603 2668.5,587.25 2732.3,607 2750,\ 595 2758.2,589.43 2752.5,581.56 2760,575 2772.2,564.33 2787.9,556.96 2803.1,551.89"]; bacterial_annot_2nd_pass_genemark -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 10 2577.39 620.52 2552.92 618.3 2528.36 615.51 2505 612 2470.2 606.77 2413.25 602.66 2435 575 2449.19 556.96 2549.8 \ 548.42 2649.34 544.42 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2649.32 546.87 2656.22 544.15 2649.13 541.97 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2469.5 583.1 0 69 14 -wp_assignments ", label=wp_assignments, lp="2469.5,585", pos="e,2657.7,544.09 2577.4,620.52 2552.9,618.3 2528.4,615.51 2505,612 2470.2,606.77 2413.3,602.66 2435,575 2449.2,556.96 2549.8,548.42 \ 2649.3,544.42"]; bacterial_annot_2nd_pass_genemark -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 13 2565.47 620.52 2551.19 618.26 2539.24 615.47 2531 612 2513.96 604.84 2504.45 591.88 2512 575 2516.63 564.66 2520.52 \ 562.32 2531 558 2543.62 552.8 2592.78 549.11 2649.3 546.53 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2649.29 548.98 2656.17 546.22 2649.07 544.08 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2521 583.1 0 18 4 -lds2 ", label=lds2, lp="2521,585", pos="e,2657.7,546.15 2565.5,620.52 2551.2,618.26 2539.2,615.47 2531,612 2514,604.84 2504.5,591.88 2512,575 2516.6,564.66 2520.5,562.32 \ 2531,558 2543.6,552.8 2592.8,549.11 2649.3,546.53"]; bacterial_annot_2nd_pass_genemark -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 10 2601.23 620.53 2571.83 615.29 2547.86 607.24 2538 595 2532.42 588.08 2532.42 581.92 2538 575 2547.49 563.21 2606.29 \ 555.31 2670.95 550.12 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2670.98 552.58 2677.76 549.59 2670.59 547.69 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2576.5 583.1 0 77 15 -hmm_assignments ", label=hmm_assignments, lp="2576.5,585", pos="e,2679.3,549.47 2601.2,620.53 2571.8,615.29 2547.9,607.24 2538,595 2532.4,588.08 2532.4,581.92 2538,575 2547.5,563.21 2606.3,555.31 \ 2670.9,550.12"]; bacterial_annot_2nd_pass_genemark -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 13 2684.21 620.54 2672.53 618.32 2660.91 615.52 2650 612 2635.05 607.18 2627.01 608.52 2619 595 2614.47 587.35 2613.17 \ 581.71 2619 575 2628.86 563.64 2651.96 555.98 2680.12 550.84 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2680.21 553.31 2686.69 549.71 2679.38 548.48 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2684 583.1 0 130 31 -Extract_Model_Proteins_prot_ids ", label=Extract_Model_Proteins_prot_ids, lp="2684,585", pos="e,2688.2,549.45 2684.2,620.54 2672.5,618.32 2660.9,615.52 2650,612 2635,607.18 2627,608.52 2619,595 2614.5,587.35 2613.2,581.71 \ 2619,575 2628.9,563.64 2652,555.98 2680.1,550.84"]; Prepare_Unannotated_Sequences_text [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1257 1070.5 1257 1089.5 1343 1089.5 1343 1070.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1300 1077.5 0 70 14 -asn_translator ", height=0.27778, label=asn_translator, pos="1300,1080", rects="1257,1070.5,1343,1089.5", width=1.1944]; Prepare_Unannotated_Sequences_asndisc_cpp [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1368 1025.5 1368 1044.5 1444 1044.5 1444 1025.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1406 1032.5 0 60 11 -asndisc_cpp ", height=0.27778, label=asndisc_cpp, pos="1406,1035", rects="1368,1025.5,1444,1044.5", width=1.0556]; Prepare_Unannotated_Sequences_text -> Prepare_Unannotated_Sequences_asndisc_cpp [_draw_="c 7 -#000000 B 4 1320.94 1070.5 1337.06 1063.97 1359.51 1054.86 1377.3 1047.64 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1378.13 1049.95 1383.7 1045.05 1376.29 1045.41 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1363.5 1055.6 0 3 1 -i ", label=i, lp="1363.5,1057.5", pos="e,1385.1,1044.5 1320.9,1070.5 1337.1,1064 1359.5,1054.9 1377.3,1047.6"]; bacterial_trna -> ab_initio_training [_draw_="c 7 -#000000 B 10 1908.72 938.67 1932.18 935.59 1961.75 931.45 1988 927 2008.11 923.59 2012.83 921.01 2033 918 2052.58 915.08 2073.5 \ 912.53 2093.75 910.35 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2093.86 912.8 2100.57 909.63 2093.35 907.93 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2057.5 920.6 0 49 11 -trna_annots ", label=trna_annots, lp="2057.5,922.5", pos="e,2102.1,909.47 1908.7,938.67 1932.2,935.59 1961.7,931.45 1988,927 2008.1,923.59 2012.8,921.01 2033,918 2052.6,915.08 2073.5,912.53 \ 2093.7,910.35"]; Get_Proteins -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 31 2175.32 1124.25 2254.89 1124.13 2434.94 1120.4 2487 1090 2496.37 1084.53 2491.95 1075.98 2501 1070 2626.42 987.06 \ 2706.47 1082.78 2832 1000 2856.5 983.84 2870 975.35 2870 946 2870 946 2870 946 2870 854 2870 811.48 2965.24 739.35 2996 710 3032.16 \ 675.5 3050.96 677.5 3084 640 3095.96 626.42 3109.67 618.88 3101 603 3083.28 570.54 3065.93 570.15 3031 558 3022.55 555.06 3008.73 \ 552.57 2992.49 550.48 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2993.08 548.09 2985.83 549.67 2992.48 552.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2893.5 830.6 0 31 7 -blastdb ", label=blastdb, lp="2893.5,832.5", pos="e,2984.3,549.49 2175.3,1124.2 2254.9,1124.1 2434.9,1120.4 2487,1090 2496.4,1084.5 2491.9,1076 2501,1070 2626.4,987.06 2706.5,1082.8 \ 2832,1000 2856.5,983.84 2870,975.35 2870,946 2870,946 2870,946 2870,854 2870,811.48 2965.2,739.35 2996,710 3032.2,675.5 3051,677.5 \ 3084,640 3096,626.42 3109.7,618.88 3101,603 3083.3,570.54 3065.9,570.15 3031,558 3022.5,555.06 3008.7,552.57 2992.5,550.48"]; Get_Proteins -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 28 2138.63 1115.79 2140.46 1103.98 2141.79 1082.27 2130 1070 2115.32 1054.72 2097.54 1077.41 2083 1062 2052.62 1029.8 \ 2100.02 997.28 2072 963 2067.86 957.94 1963.85 932.28 1960 927 1957.64 923.77 1959.87 922 1960 918 1960.67 897.97 1959.89 892.8 \ 1963 873 1963.57 869.38 1964.55 868.64 1965 865 1972 808.14 1986.47 775.31 1943 738 1939.56 735.05 1929.07 732.59 1914.62 730.55 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1914.96 728.12 1907.7 729.65 1914.33 732.98 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1975.5 920.6 0 31 7 -blastdb ", label=blastdb, lp="1975.5,922.5", pos="e,1906.2,729.45 2138.6,1115.8 2140.5,1104 2141.8,1082.3 2130,1070 2115.3,1054.7 2097.5,1077.4 2083,1062 2052.6,1029.8 2100,997.28 \ 2072,963 2067.9,957.94 1963.8,932.28 1960,927 1957.6,923.77 1959.9,922 1960,918 1960.7,897.97 1959.9,892.8 1963,873 1963.6,869.38 \ 1964.6,868.64 1965,865 1972,808.14 1986.5,775.31 1943,738 1939.6,735.05 1929.1,732.59 1914.6,730.55"]; Get_Proteins -> protein_alignment [_draw_="c 7 -#000000 B 43 2159.49 1115.52 2182.59 1105.57 2213.17 1088.1 2198 1070 2184.95 1054.43 2169.59 1073.72 2153 1062 2137.56 1051.09 \ 2142.93 1040.43 2132 1025 2110.88 995.18 2107.12 985.08 2078 963 2063.11 951.71 2018.35 936.05 2002 927 1995.53 923.42 1994.51 921.51 \ 1988 918 1980.3 913.84 1974.77 917.34 1970 910 1965.16 902.55 1969 898.83 1970 890 1972.91 864.4 1983 859.27 1983 833.5 1983 833.5 \ 1983 833.5 1983 764 1983 752.03 1982.55 748.01 1976 738 1972.88 733.24 1969.35 734.6 1966 730 1955.66 715.78 1966.04 703.59 1952 \ 693 1948.06 690.03 1936.17 687.54 1919.99 685.47 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1920.47 683.06 1913.23 684.67 1919.89 687.93 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1987.5 898.1 0 35 9 -all_prots ", label=all_prots, lp="1987.5,900", pos="e,1911.7,684.49 2159.5,1115.5 2182.6,1105.6 2213.2,1088.1 2198,1070 2185,1054.4 2169.6,1073.7 2153,1062 2137.6,1051.1 2142.9,1040.4 \ 2132,1025 2110.9,995.18 2107.1,985.08 2078,963 2063.1,951.71 2018.3,936.05 2002,927 1995.5,923.42 1994.5,921.51 1988,918 1980.3,\ 913.84 1974.8,917.34 1970,910 1965.2,902.55 1969,898.83 1970,890 1972.9,864.4 1983,859.27 1983,833.5 1983,833.5 1983,833.5 1983,\ 764 1983,752.03 1982.6,748.01 1976,738 1972.9,733.24 1969.3,734.6 1966,730 1955.7,715.78 1966,703.59 1952,693 1948.1,690.03 1936.2,\ 687.54 1920,685.47"]; Generate_Annotation_Reports_gff [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 944 170.5 944 189.5 1044 189.5 1044 170.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 994 177.5 0 84 15 -gp_annot_format ", height=0.27778, label=gp_annot_format, pos="994,180", rects="944,170.5,1044,189.5", width=1.3889]; Generate_Annotation_Reports_gff -> gff [_draw_="c 7 -#000000 B 4 996.73 170.82 1001.99 155.02 1013.64 120.09 1020.55 99.36 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1022.82 100.29 1022.71 92.87 1018.17 98.74 ", pos="e,1023.2,91.438 996.73,170.82 1002,155.02 1013.6,120.09 1020.5,99.356"]; Generate_Annotation_Reports_gff -> ping_stop [_draw_="c 7 -#000000 B 4 951.13 170.5 909.1 162.18 846.03 149.68 808.44 142.23 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 809.2 139.88 801.86 140.93 808.25 144.69 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 914.5 155.6 0 21 6 -infile ", label=infile, lp="914.5,157.5", pos="e,800.37,140.63 951.13,170.5 909.1,162.18 846.03,149.68 808.44,142.23"]; Generate_Annotation_Reports_cds_nuc_fasta [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 547.5 125.5 547.5 144.5 612.5 144.5 612.5 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 580 132.5 0 49 9 -asn2fasta ", height=0.27778, label=asn2fasta, pos="580,135", rects="547.5,125.5,612.5,144.5", width=0.90278]; Generate_Annotation_Reports_cds_nuc_fasta -> cds_nucleotide_fasta [_draw_="c 7 -#000000 B 4 595.19 125.58 609.97 117.38 632.61 104.83 649.49 95.48 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 650.53 97.7 655.46 92.17 648.15 93.42 ", pos="e,656.79,91.434 595.19,125.58 609.97,117.38 632.61,104.83 649.49,95.48"]; genomic_source -> Final_Bacterial_Package_ent2sqn [_draw_="c 7 -#000000 B 37 1010.66 1160.51 957.88 1157.29 911.33 1153.93 909 1152 889.91 1136.19 903.89 1121.14 895 1098 881.88 1063.86 875.37 \ 1056.63 857 1025 833.1 983.85 826.25 974.01 799 935 753.4 869.7 729.48 861.73 691 792 682.5 776.61 690.14 766.69 677 755 642.77 \ 724.55 605.19 766.11 577 730 571.53 722.99 574.39 718.5 577 710 580.95 697.16 588.67 697.33 594 685 599.69 671.84 601 667.84 601 \ 653.5 601 653.5 601 653.5 601 314 601 291.76 624.94 281 646.95 275.81 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 647.41 278.22 653.76 274.39 646.4 273.42 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 624 718.1 0 94 21 -submit_block_template ", label=submit_block_template, lp="624,720", pos="e,655.24,274.08 1010.7,1160.5 957.88,1157.3 911.33,1153.9 909,1152 889.91,1136.2 903.89,1121.1 895,1098 881.88,1063.9 875.37,1056.6 \ 857,1025 833.1,983.85 826.25,974.01 799,935 753.4,869.7 729.48,861.73 691,792 682.5,776.61 690.14,766.69 677,755 642.77,724.55 605.19,\ 766.11 577,730 571.53,722.99 574.39,718.5 577,710 580.95,697.16 588.67,697.33 594,685 599.69,671.84 601,667.84 601,653.5 601,653.5 \ 601,653.5 601,314 601,291.76 624.94,281 646.95,275.81"]; genomic_source -> Final_Bacterial_Package_ent2sqn [_draw_="c 7 -#000000 B 34 1007.69 1160.73 969.53 1158.06 938.52 1155.01 935 1152 929.1 1146.96 932.76 1142.56 931 1135 921.94 1096.11 902.84 \ 995.03 879 963 870.83 952.02 836.97 938.13 829 927 809.51 899.8 801.52 812.1 785 783 769.31 755.36 748.43 759.65 737 730 731.96 \ 716.93 738 712.51 738 698.5 738 698.5 738 698.5 738 539 738 498.69 716 491.31 716 451 716 451 716 451 716 314 716 302.6 708.61 292.36 \ 700.83 284.74 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 702.89 283.3 696.04 280.45 699.62 286.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 763.5 718.1 0 53 11 -gc_assembly ", label=gc_assembly, lp="763.5,720", pos="e,694.91,279.44 1007.7,1160.7 969.53,1158.1 938.52,1155 935,1152 929.1,1147 932.76,1142.6 931,1135 921.94,1096.1 902.84,995.03 879,\ 963 870.83,952.02 836.97,938.13 829,927 809.51,899.8 801.52,812.1 785,783 769.31,755.36 748.43,759.65 737,730 731.96,716.93 738,\ 712.51 738,698.5 738,698.5 738,698.5 738,539 738,498.69 716,491.31 716,451 716,451 716,451 716,314 716,302.6 708.61,292.36 700.83,\ 284.74"]; genomic_source -> Final_Bacterial_Package_ent2sqn [_draw_="c 7 -#000000 B 28 1007.51 1160.52 967.23 1157.77 934 1154.73 930 1152 896.68 1129.23 908.44 1106.4 891 1070 856.99 999 842.1 983.91 \ 815 910 809.9 896.08 784.02 793.93 774 783 767.81 776.25 763.05 779.38 755 775 723.82 758.03 711.38 757.56 689 730 679.45 718.24 \ 676 713.65 676 698.5 676 698.5 676 698.5 676 314 676 305.1 677.48 295.29 679.08 287.29 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 681.43 288.02 680.54 280.66 676.64 286.97 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 711 718.1 0 44 9 -asn_cache ", label=asn_cache, lp="711,720", pos="e,680.86,279.18 1007.5,1160.5 967.23,1157.8 934,1154.7 930,1152 896.68,1129.2 908.44,1106.4 891,1070 856.99,999 842.1,983.91 815,\ 910 809.9,896.08 784.02,793.93 774,783 767.81,776.25 763.05,779.38 755,775 723.82,758.03 711.38,757.56 689,730 679.45,718.24 676,\ 713.65 676,698.5 676,698.5 676,698.5 676,314 676,305.1 677.48,295.29 679.08,287.29"]; genomic_source -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 31 1085.7 1160.51 1076.06 1158.28 1068.15 1155.49 1064 1152 1051.25 1141.28 1056.55 1131.6 1058 1115 1059.78 1094.68 \ 1061.83 1089.73 1067 1070 1076.15 1035.1 1093.76 937.67 1124 918 1139.2 908.11 1148.51 919.43 1164 910 1173.72 904.08 1170.07 895.57 \ 1180 890 1204.62 876.19 1222.67 901.57 1243 882 1278.22 848.1 1245.05 700.17 1279 665 1305.45 637.6 1325.12 652.02 1363 648 1390.53 \ 645.08 2076.39 637.93 2486.39 633.89 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2486.33 636.34 2493.3 633.83 2486.28 631.45 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1215 898.1 0 70 14 -sequence_cache ", label=sequence_cache, lp="1215,900", pos="e,2494.8,633.81 1085.7,1160.5 1076.1,1158.3 1068.2,1155.5 1064,1152 1051.2,1141.3 1056.5,1131.6 1058,1115 1059.8,1094.7 1061.8,1089.7 \ 1067,1070 1076.1,1035.1 1093.8,937.67 1124,918 1139.2,908.11 1148.5,919.43 1164,910 1173.7,904.08 1170.1,895.57 1180,890 1204.6,\ 876.19 1222.7,901.57 1243,882 1278.2,848.1 1245.1,700.17 1279,665 1305.5,637.6 1325.1,652.02 1363,648 1390.5,645.08 2076.4,637.93 \ 2486.4,633.89"]; genomic_source -> Cache_Entrez_Gene [_draw_="c 7 -#000000 B 16 1162.72 1160.6 1161.7 1155.4 1161.11 1148.67 1163 1143 1164.41 1138.78 1166.9 1138.92 1169 1135 1205.89 1066.11 \ 1185.29 1020.7 1252 980 1270.84 968.51 1279.31 976.06 1301 972 1326.51 967.22 1354.85 961.28 1377.9 956.28 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1378.34 958.69 1384.66 954.8 1377.3 953.9 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1219 1055.6 0 44 9 -asn_cache ", label=asn_cache, lp="1219,1057.5", pos="e,1386.1,954.48 1162.7,1160.6 1161.7,1155.4 1161.1,1148.7 1163,1143 1164.4,1138.8 1166.9,1138.9 1169,1135 1205.9,1066.1 1185.3,1020.7 \ 1252,980 1270.8,968.51 1279.3,976.06 1301,972 1326.5,967.22 1354.9,961.28 1377.9,956.28"]; genomic_source -> bacterial_trna [_draw_="c 7 -#000000 B 28 1322.31 1165.07 1378.41 1162.57 1434.31 1158.53 1461 1152 1470.47 1149.68 1471.83 1146.31 1481 1143 1493.58 1138.47 \ 1497.57 1139.92 1510 1135 1527.75 1127.98 1530.53 1122.67 1548 1115 1578.25 1101.72 1586.92 1101.2 1618 1090 1642.47 1081.18 1648.39 \ 1078.42 1673 1070 1691.22 1063.76 1826.66 1032.56 1838 1017 1852.43 997.21 1813.58 983.49 1827 963 1827.81 961.77 1828.72 960.62 \ 1829.73 959.56 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1831.16 961.56 1835.13 955.29 1828.12 957.72 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1749 1055.6 0 28 6 -seqids ", label=seqids, lp="1749,1057.5", pos="e,1836.3,954.35 1322.3,1165.1 1378.4,1162.6 1434.3,1158.5 1461,1152 1470.5,1149.7 1471.8,1146.3 1481,1143 1493.6,1138.5 1497.6,1139.9 \ 1510,1135 1527.7,1128 1530.5,1122.7 1548,1115 1578.2,1101.7 1586.9,1101.2 1618,1090 1642.5,1081.2 1648.4,1078.4 1673,1070 1691.2,\ 1063.8 1826.7,1032.6 1838,1017 1852.4,997.21 1813.6,983.49 1827,963 1827.8,961.77 1828.7,960.62 1829.7,959.56"]; genomic_source -> bacterial_trna [_draw_="c 7 -#000000 B 28 1322.3 1167.39 1371.47 1165.02 1425.73 1160.46 1475 1152 1501.48 1147.46 1509.06 1147.18 1533 1135 1546 1128.39 \ 1545.9 1121.4 1559 1115 1569.57 1109.84 1753.4 1067.1 1764 1062 1770.01 1059.11 1770.12 1056.13 1776 1053 1785.55 1047.91 1789.26 \ 1049.71 1799 1045 1819.86 1034.9 1827.71 1034.42 1843 1017 1857.56 1000.41 1858.4 993.35 1864 972 1864.78 969.02 1865.29 965.79 \ 1865.61 962.64 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1868.05 962.97 1866.02 955.83 1863.16 962.67 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1798 1055.6 0 44 9 -asn_cache ", label=asn_cache, lp="1798,1057.5", pos="e,1866.1,954.32 1322.3,1167.4 1371.5,1165 1425.7,1160.5 1475,1152 1501.5,1147.5 1509.1,1147.2 1533,1135 1546,1128.4 1545.9,1121.4 \ 1559,1115 1569.6,1109.8 1753.4,1067.1 1764,1062 1770,1059.1 1770.1,1056.1 1776,1053 1785.6,1047.9 1789.3,1049.7 1799,1045 1819.9,\ 1034.9 1827.7,1034.4 1843,1017 1857.6,1000.4 1858.4,993.35 1864,972 1864.8,969.02 1865.3,965.79 1865.6,962.64"]; genomic_source -> bacterial_orthology_conditional [_draw_="c 7 -#000000 B 43 1056.03 1160.54 1044.34 1158.33 1034.65 1155.53 1029 1152 1017.29 1144.69 1012 1139.81 1012 1126 1012 1126 1012 \ 1126 1012 1056.5 1012 996.27 1031.86 979.9 1072 935 1079.55 926.55 1080.99 923.31 1091 918 1103.95 911.13 1113.98 921.56 1123 910 \ 1128.47 902.99 1128.04 897.32 1123 890 1117.33 881.78 1108.43 889.65 1102 882 1083.94 860.52 1092.68 847.94 1090 820 1089.15 811.15 \ 1088.91 808.82 1090 800 1090.45 796.36 1091.23 795.58 1092 792 1107.27 720.91 1121 703.71 1121 631 1121 631 1121 631 1121 494 1121 \ 485.04 1123.27 475.35 1125.74 467.44 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1128.06 468.25 1128.03 460.83 1123.43 466.65 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1112 808.1 0 44 9 -asn_cache ", label=asn_cache, lp="1112,810", pos="e,1128.5,459.4 1056,1160.5 1044.3,1158.3 1034.7,1155.5 1029,1152 1017.3,1144.7 1012,1139.8 1012,1126 1012,1126 1012,1126 1012,1056.5 \ 1012,996.27 1031.9,979.9 1072,935 1079.6,926.55 1081,923.31 1091,918 1104,911.13 1114,921.56 1123,910 1128.5,902.99 1128,897.32 \ 1123,890 1117.3,881.78 1108.4,889.65 1102,882 1083.9,860.52 1092.7,847.94 1090,820 1089.2,811.15 1088.9,808.82 1090,800 1090.4,796.36 \ 1091.2,795.58 1092,792 1107.3,720.91 1121,703.71 1121,631 1121,631 1121,631 1121,494 1121,485.04 1123.3,475.35 1125.7,467.44"]; genomic_source -> bacterial_orthology_conditional [_draw_="c 7 -#000000 B 43 1041.08 1160.56 1030.26 1158.34 1021.39 1155.53 1016 1152 1004.85 1144.68 1001 1139.34 1001 1126 1001 1126 1001 \ 1126 1001 944 1001 919.67 979.48 910.86 992 890 995.89 883.52 1000.68 886.14 1007 882 1034.01 864.34 1049.92 866.05 1064 837 1065.74 \ 833.4 1066.36 831.23 1064 828 1057.12 818.58 1045.88 829.42 1039 820 1033.76 812.82 1033.38 806.89 1039 800 1050.18 786.29 1065.79 \ 804.81 1078 792 1105.86 762.77 1098.34 652.11 1103 612 1109.56 555.59 1105.83 540.68 1117 485 1118.55 477.28 1118.87 475.23 1122 \ 468 1122.16 467.64 1122.32 467.28 1122.49 466.91 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1124.63 468.1 1125.77 460.77 1120.31 465.78 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1063.5 808.1 0 49 11 -gencoll_asn ", label=gencoll_asn, lp="1063.5,810", pos="e,1126.5,459.43 1041.1,1160.6 1030.3,1158.3 1021.4,1155.5 1016,1152 1004.8,1144.7 1001,1139.3 1001,1126 1001,1126 1001,1126 1001,\ 944 1001,919.67 979.48,910.86 992,890 995.89,883.52 1000.7,886.14 1007,882 1034,864.34 1049.9,866.05 1064,837 1065.7,833.4 1066.4,\ 831.23 1064,828 1057.1,818.58 1045.9,829.42 1039,820 1033.8,812.82 1033.4,806.89 1039,800 1050.2,786.29 1065.8,804.81 1078,792 1105.9,\ 762.77 1098.3,652.11 1103,612 1109.6,555.59 1105.8,540.68 1117,485 1118.5,477.28 1118.9,475.23 1122,468 1122.2,467.64 1122.3,467.28 \ 1122.5,466.91"]; genomic_source -> ab_initio_antifam [_draw_="c 7 -#000000 B 28 1322.28 1165.6 1361.57 1163.15 1394.49 1158.99 1401 1152 1405.48 1147.19 1402.78 1136.4 1396 1115 1392.67 1104.48 \ 1362.98 1031.41 1354 1025 1340.36 1015.26 1290.21 1029.46 1279 1017 1260.27 996.17 1289.54 1014.38 1313 1000 1329.13 990.11 1351.53 \ 944.32 1368 935 1387.2 924.13 1395.48 931.86 1417 927 1500.96 908.03 1518.54 889.64 1603 873 1617.96 870.05 1633.82 867.59 1649.51 \ 865.53 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1649.55 868 1656.18 864.69 1648.93 863.14 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1314 1010.6 0 70 14 -sequence_cache ", label=sequence_cache, lp="1314,1012.5", pos="e,1657.7,864.5 1322.3,1165.6 1361.6,1163.1 1394.5,1159 1401,1152 1405.5,1147.2 1402.8,1136.4 1396,1115 1392.7,1104.5 1363,1031.4 \ 1354,1025 1340.4,1015.3 1290.2,1029.5 1279,1017 1260.3,996.17 1289.5,1014.4 1313,1000 1329.1,990.11 1351.5,944.32 1368,935 1387.2,\ 924.13 1395.5,931.86 1417,927 1501,908.03 1518.5,889.64 1603,873 1618,870.05 1633.8,867.59 1649.5,865.53"]; genomic_source -> spurious_annot_prelim [_draw_="c 7 -#000000 B 40 1322.46 1162.29 1345.8 1159.85 1363.59 1156.53 1368 1152 1369.96 1149.99 1369.12 1115.45 1369 1115 1366.01 1103.84 \ 1350.78 1078.53 1343 1070 1340.8 1067.59 1322.06 1054.15 1319 1053 1302.9 1046.94 1254.52 1056.8 1242 1045 1228.6 1032.37 1217.92 \ 976.9 1230 963 1238.39 953.35 1275.12 959.74 1287 955 1301.2 949.33 1300.85 940.81 1315 935 1335.82 926.46 1348.03 941.78 1365 927 \ 1410.15 887.66 1365.78 840.39 1410 800 1427.33 784.17 1436.93 787.31 1460 783 1544.39 767.24 1567.5 782.76 1653 775 1656.39 774.69 \ 1659.88 774.33 1663.4 773.93 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1663.45 776.39 1670.11 773.12 1662.87 771.53 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1265 965.6 0 70 14 -sequence_cache ", label=sequence_cache, lp="1265,967.5", pos="e,1671.6,772.94 1322.5,1162.3 1345.8,1159.8 1363.6,1156.5 1368,1152 1370,1150 1369.1,1115.4 1369,1115 1366,1103.8 1350.8,1078.5 \ 1343,1070 1340.8,1067.6 1322.1,1054.2 1319,1053 1302.9,1046.9 1254.5,1056.8 1242,1045 1228.6,1032.4 1217.9,976.9 1230,963 1238.4,\ 953.35 1275.1,959.74 1287,955 1301.2,949.33 1300.9,940.81 1315,935 1335.8,926.46 1348,941.78 1365,927 1410.1,887.66 1365.8,840.39 \ 1410,800 1427.3,784.17 1436.9,787.31 1460,783 1544.4,767.24 1567.5,782.76 1653,775 1656.4,774.69 1659.9,774.33 1663.4,773.93"]; genomic_source -> spurious_annot_final [_draw_="c 7 -#000000 B 31 1075.74 1160.58 1068.85 1158.29 1062.18 1155.47 1056 1152 1042.8 1144.59 1034 1141.14 1034 1126 1034 1126 1034 \ 1126 1034 1056.5 1034 1038.78 1098.15 927.66 1113 918 1128.2 908.11 1138.53 920.93 1153 910 1167.75 898.86 1157.2 884.07 1172 873 \ 1187.22 861.62 1199.76 877.58 1214 865 1282.91 804.11 1219.68 743.85 1267 665 1273 655 1276.12 652.22 1287 648 1440.73 588.4 2590.88 \ 608.81 2789.31 595.12 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2789.22 597.58 2796.01 594.6 2788.84 592.7 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1207 875.6 0 70 14 -sequence_cache ", label=sequence_cache, lp="1207,877.5", pos="e,2797.5,594.48 1075.7,1160.6 1068.8,1158.3 1062.2,1155.5 1056,1152 1042.8,1144.6 1034,1141.1 1034,1126 1034,1126 1034,1126 1034,\ 1056.5 1034,1038.8 1098.1,927.66 1113,918 1128.2,908.11 1138.5,920.93 1153,910 1167.8,898.86 1157.2,884.07 1172,873 1187.2,861.62 \ 1199.8,877.58 1214,865 1282.9,804.11 1219.7,743.85 1267,665 1273,655 1276.1,652.22 1287,648 1440.7,588.4 2590.9,608.81 2789.3,595.12"]; genomic_source -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 31 1062.24 1160.51 1052.49 1158.3 1044.55 1155.51 1040 1152 1005 1124.97 1025.34 1096.98 1030 1053 1036.12 995.27 \ 1049.91 980.47 1086 935 1092.64 926.63 1093.58 923.04 1103 918 1118.98 909.45 1131.19 923.75 1143 910 1161.85 888.06 1130.91 869.67 \ 1146 845 1149.74 838.89 1154.49 841.58 1160 837 1201.81 802.19 1239 797.9 1239 743.5 1239 743.5 1239 743.5 1239 584 1239 549.12 \ 2212.22 542.48 2649.54 541.25 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2649.35 543.7 2656.34 541.24 2649.33 538.8 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1181 853.1 0 70 14 -sequence_cache ", label=sequence_cache, lp="1181,855", pos="e,2657.9,541.23 1062.2,1160.5 1052.5,1158.3 1044.5,1155.5 1040,1152 1005,1125 1025.3,1097 1030,1053 1036.1,995.27 1049.9,980.47 \ 1086,935 1092.6,926.63 1093.6,923.04 1103,918 1119,909.45 1131.2,923.75 1143,910 1161.8,888.06 1130.9,869.67 1146,845 1149.7,838.89 \ 1154.5,841.58 1160,837 1201.8,802.19 1239,797.9 1239,743.5 1239,743.5 1239,743.5 1239,584 1239,549.12 2212.2,542.48 2649.5,541.25"]; genomic_source -> Final_Bacterial_Package_std_validation [_draw_="c 7 -#000000 B 25 1010.07 1160.52 990.75 1158.26 976.23 1155.46 972 1152 955.32 1138.34 937.15 982.52 928 963 908.77 921.95 880.55 \ 924.94 866 882 861.77 869.52 872.85 852.09 876 837 878.1 826.92 902 663.8 902 653.5 902 653.5 902 653.5 902 269 902 237.29 918.59 \ 228.22 909 198 908.88 197.62 908.75 197.24 908.61 196.87 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 910.75 195.69 905.21 190.76 906.47 198.07 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 922 673.1 0 44 9 -asn_cache ", label=asn_cache, lp="922,675", pos="e,904.48,189.44 1010.1,1160.5 990.75,1158.3 976.23,1155.5 972,1152 955.32,1138.3 937.15,982.52 928,963 908.77,921.95 880.55,924.94 \ 866,882 861.77,869.52 872.85,852.09 876,837 878.1,826.92 902,663.8 902,653.5 902,653.5 902,653.5 902,269 902,237.29 918.59,228.22 \ 909,198 908.88,197.62 908.75,197.24 908.61,196.87"]; genomic_source -> Final_Bacterial_Package_std_validation [_draw_="c 7 -#000000 B 28 1008.65 1160.53 986.74 1158.25 969.93 1155.43 965 1152 958.15 1147.23 959.83 1142.86 957 1135 930.3 1060.75 949.24 \ 1033.09 913 963 909.45 956.14 871.33 916.97 868 910 828.98 828.37 873.84 789.15 830 710 822.08 695.69 809.55 699.99 803 685 786.78 \ 647.87 856.47 365.26 861 325 864.16 296.91 853.28 222.13 868 198 868.66 196.91 869.43 195.88 870.27 194.91 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 871.85 196.78 875.54 190.35 868.65 193.08 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 850 673.1 0 94 21 -submit_block_template ", label=submit_block_template, lp="850,675", pos="e,876.69,189.36 1008.7,1160.5 986.74,1158.3 969.93,1155.4 965,1152 958.15,1147.2 959.83,1142.9 957,1135 930.3,1060.7 949.24,1033.1 \ 913,963 909.45,956.14 871.33,916.97 868,910 828.98,828.37 873.84,789.15 830,710 822.08,695.69 809.55,699.99 803,685 786.78,647.87 \ 856.47,365.26 861,325 864.16,296.91 853.28,222.13 868,198 868.66,196.91 869.43,195.88 870.27,194.91"]; genomic_source -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 40 1322.16 1161.67 1334.11 1159.23 1343.89 1156.07 1350 1152 1357.11 1147.26 1356.94 1143.3 1359 1135 1361.14 1126.37 \ 1364.96 1121.6 1359 1115 1347.32 1102.07 1297.7 1111.98 1281 1107 1239.28 1094.56 1216.93 1099 1194 1062 1174.8 1031.02 1191.93 \ 1016.43 1193 980 1193.22 972.43 1190.01 969.43 1194 963 1197.78 956.91 1203.3 960.41 1208 955 1214.28 947.78 1208.23 940.59 1216 \ 935 1240.93 917.05 1330.29 946.53 1354 927 1384.45 901.91 1377.52 788.72 1398 755 1403.88 745.31 1406.52 742.31 1417 738 1430.63 \ 732.39 1486.26 728.55 1548.19 725.96 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1548.16 728.41 1555.05 725.68 1547.96 723.52 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1251 943.1 0 70 14 -sequence_cache ", label=sequence_cache, lp="1251,945", pos="e,1556.6,725.62 1322.2,1161.7 1334.1,1159.2 1343.9,1156.1 1350,1152 1357.1,1147.3 1356.9,1143.3 1359,1135 1361.1,1126.4 1365,1121.6 \ 1359,1115 1347.3,1102.1 1297.7,1112 1281,1107 1239.3,1094.6 1216.9,1099 1194,1062 1174.8,1031 1191.9,1016.4 1193,980 1193.2,972.43 \ 1190,969.43 1194,963 1197.8,956.91 1203.3,960.41 1208,955 1214.3,947.78 1208.2,940.59 1216,935 1240.9,917.05 1330.3,946.53 1354,\ 927 1384.4,901.91 1377.5,788.72 1398,755 1403.9,745.31 1406.5,742.31 1417,738 1430.6,732.39 1486.3,728.55 1548.2,725.96"]; genomic_source -> protein_alignment [_draw_="c 7 -#000000 B 34 1105.62 1160.58 1098.75 1158.35 1092.05 1155.55 1086 1152 1064.79 1139.57 1066.72 1121.48 1074 1098 1079.89 1079 \ 1132.88 947.92 1148 935 1158.17 926.32 1164.47 931.66 1177 927 1185.76 923.75 1187.03 920.6 1196 918 1223.95 909.89 1235.01 923.1 \ 1261 910 1271.95 904.48 1269.39 896.14 1280 890 1293.06 882.44 1303.42 893.66 1313 882 1333.05 857.59 1316 842.58 1316 811 1316 \ 811 1316 811 1316 719 1316 691.61 1454.99 681.45 1575.48 677.79 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1575.32 680.25 1582.24 677.6 1575.18 675.35 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1222 920.6 0 52 11 -genomic_ids ", label=genomic_ids, lp="1222,922.5", pos="e,1583.8,677.55 1105.6,1160.6 1098.8,1158.4 1092.1,1155.5 1086,1152 1064.8,1139.6 1066.7,1121.5 1074,1098 1079.9,1079 1132.9,947.92 \ 1148,935 1158.2,926.32 1164.5,931.66 1177,927 1185.8,923.75 1187,920.6 1196,918 1224,909.89 1235,923.1 1261,910 1271.9,904.48 1269.4,\ 896.14 1280,890 1293.1,882.44 1303.4,893.66 1313,882 1333,857.59 1316,842.58 1316,811 1316,811 1316,811 1316,719 1316,691.61 1455,\ 681.45 1575.5,677.79"]; genomic_source -> protein_alignment [_draw_="c 7 -#000000 B 25 1096.71 1160.54 1086.65 1158.26 1078.24 1155.45 1074 1152 1045.72 1129.01 1065.36 1105.15 1075 1070 1079.77 1052.61 \ 1117.53 928.77 1132 918 1153.27 902.18 1231.24 927.67 1251 910 1277.09 886.67 1265.18 787.16 1279 755 1288.79 732.21 1294 727.06 \ 1312 710 1322.02 700.5 1324.85 697.21 1338 693 1360.93 685.65 1473.74 681.33 1575.38 678.88 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1575.16 681.34 1582.1 678.72 1575.04 676.44 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1154 920.6 0 44 9 -asn_cache ", label=asn_cache, lp="1154,922.5", pos="e,1583.6,678.69 1096.7,1160.5 1086.6,1158.3 1078.2,1155.4 1074,1152 1045.7,1129 1065.4,1105.1 1075,1070 1079.8,1052.6 1117.5,928.77 \ 1132,918 1153.3,902.18 1231.2,927.67 1251,910 1277.1,886.67 1265.2,787.16 1279,755 1288.8,732.21 1294,727.06 1312,710 1322,700.5 \ 1324.9,697.21 1338,693 1360.9,685.65 1473.7,681.33 1575.4,678.88"]; genomic_source -> orfs_hmms [_draw_="c 7 -#000000 B 34 1322.24 1163.47 1351.07 1160.96 1373.8 1157.31 1379 1152 1380.96 1150 1380.13 1115.45 1380 1115 1378.44 1109.38 \ 1356.92 1074.32 1353 1070 1344.45 1060.59 1341.85 1057.59 1330 1053 1313.75 1046.71 1264.56 1057.07 1252 1045 1230.97 1024.79 1238.08 \ 998.04 1261 980 1275.25 968.79 1285.81 981.9 1301 972 1317.84 961.02 1309.82 945.43 1327 935 1350 921.04 1366.04 943.86 1387 927 \ 1423.48 897.66 1386.08 856.79 1423 828 1425.98 825.68 1430.07 823.66 1435.02 821.89 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1435.44 824.33 1441.42 819.94 1434.01 819.64 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1283 988.1 0 44 9 -asn_cache ", label=asn_cache, lp="1283,990", pos="e,1442.9,819.49 1322.2,1163.5 1351.1,1161 1373.8,1157.3 1379,1152 1381,1150 1380.1,1115.5 1380,1115 1378.4,1109.4 1356.9,1074.3 \ 1353,1070 1344.5,1060.6 1341.9,1057.6 1330,1053 1313.8,1046.7 1264.6,1057.1 1252,1045 1231,1024.8 1238.1,998.04 1261,980 1275.2,\ 968.79 1285.8,981.9 1301,972 1317.8,961.02 1309.8,945.43 1327,935 1350,921.04 1366,943.86 1387,927 1423.5,897.66 1386.1,856.79 1423,\ 828 1426,825.68 1430.1,823.66 1435,821.89"]; genomic_source -> bacterial_noncoding [_draw_="c 7 -#000000 B 31 1322.39 1166.61 1419.43 1164.34 1529.36 1160.03 1551 1152 1575.92 1142.75 1573.13 1124.38 1598 1115 1628.61 1103.46 \ 1713.87 1117.07 1745 1107 1752.04 1104.72 1752.37 1101.27 1759 1098 1811.95 1071.87 1826.63 1066.98 1884 1053 1910.14 1046.63 1918.63 \ 1053.94 1944 1045 1960.18 1039.3 1961.34 1032 1977 1025 2013.9 1008.51 2114.32 988.98 2151 972 2157.71 968.89 2157.99 965.37 2165 \ 963 2176.87 958.99 2236.39 954.37 2288.89 950.97 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2288.91 953.42 2295.74 950.53 2288.59 948.53 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1906 1055.6 0 44 9 -asn_cache ", label=asn_cache, lp="1906,1057.5", pos="e,2297.2,950.43 1322.4,1166.6 1419.4,1164.3 1529.4,1160 1551,1152 1575.9,1142.7 1573.1,1124.4 1598,1115 1628.6,1103.5 1713.9,1117.1 \ 1745,1107 1752,1104.7 1752.4,1101.3 1759,1098 1811.9,1071.9 1826.6,1067 1884,1053 1910.1,1046.6 1918.6,1053.9 1944,1045 1960.2,1039.3 \ 1961.3,1032 1977,1025 2013.9,1008.5 2114.3,988.98 2151,972 2157.7,968.89 2158,965.37 2165,963 2176.9,958.99 2236.4,954.37 2288.9,\ 950.97"]; genomic_source -> bacterial_noncoding [_draw_="c 7 -#000000 B 22 1322.28 1166.1 1423 1163.58 1539.01 1159.17 1562 1152 1575.54 1147.78 1577.92 1143.85 1589 1135 1598.82 1127.16 \ 1597.52 1120.12 1609 1115 1638.87 1101.66 1723.69 1112.12 1756 1107 1832.77 1094.82 1850.13 1082.9 1925 1062 2076.18 1019.8 2110.78 \ 997.06 2264 963 2276.07 960.32 2288.98 957.91 2301.55 955.82 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2301.74 958.27 2308.26 954.73 2300.96 953.43 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1969 1055.6 0 28 6 -seqids ", label=seqids, lp="1969,1057.5", pos="e,2309.8,954.48 1322.3,1166.1 1423,1163.6 1539,1159.2 1562,1152 1575.5,1147.8 1577.9,1143.8 1589,1135 1598.8,1127.2 1597.5,1120.1 \ 1609,1115 1638.9,1101.7 1723.7,1112.1 1756,1107 1832.8,1094.8 1850.1,1082.9 1925,1062 2076.2,1019.8 2110.8,997.06 2264,963 2276.1,\ 960.32 2289,957.91 2301.6,955.82"]; Final_Bacterial_Package_final_bact_asn [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 946 350.5 946 369.5 1032 369.5 1032 350.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 989 357.5 0 70 14 -final_bact_asn ", height=0.27778, label=final_bact_asn, pos="989,360", rects="946,350.5,1032,369.5", width=1.1944]; genomic_source -> Final_Bacterial_Package_final_bact_asn [_draw_="c 7 -#000000 B 28 1009.54 1160.5 991.86 1158.27 978.77 1155.48 975 1152 973.55 1150.67 927.46 874.91 927 873 914.47 820.36 880.73 \ 806.61 897 755 908.42 718.78 934.58 721.22 946 685 946 685 946 603 946 603 946.89 555.42 950 543.59 950 496 950 496 950 496 950 \ 404 950 392.03 949.54 387.36 957 378 958.03 376.71 959.18 375.5 960.43 374.38 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 961.78 376.42 965.99 370.32 958.89 372.47 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 908 763.1 0 22 5 -order ", label=order, lp="908,765", pos="e,967.21,369.43 1009.5,1160.5 991.86,1158.3 978.77,1155.5 975,1152 973.55,1150.7 927.46,874.91 927,873 914.47,820.36 880.73,806.61 \ 897,755 908.42,718.78 934.58,721.22 946,685 946,685 946,603 946,603 946.89,555.42 950,543.59 950,496 950,496 950,496 950,404 950,\ 392.03 949.54,387.36 957,378 958.03,376.71 959.18,375.5 960.43,374.38"]; genomic_source -> Final_Bacterial_Package_final_bact_asn [_draw_="c 7 -#000000 B 25 1020.48 1160.53 1002.81 1158.28 989.64 1155.47 986 1152 974.35 1140.88 946.85 881 945 865 940.38 825.11 938.78 \ 815.12 937 775 936.61 766.12 936.19 763.85 937 755 939.9 723.49 945.36 716.3 950 685 956.49 641.21 961 630.27 961 586 961 586 961 \ 586 961 404 961 393.14 967.35 382.88 974 375.1 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 975.49 377.09 978.49 370.3 971.91 373.74 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 959 763.1 0 44 9 -asn_cache ", label=asn_cache, lp="959,765", pos="e,979.52,369.2 1020.5,1160.5 1002.8,1158.3 989.64,1155.5 986,1152 974.35,1140.9 946.85,881 945,865 940.38,825.11 938.78,815.12 937,\ 775 936.61,766.12 936.19,763.85 937,755 939.9,723.49 945.36,716.3 950,685 956.49,641.21 961,630.27 961,586 961,586 961,586 961,404 \ 961,393.14 967.35,382.88 974,375.1"]; genomic_source -> Final_Bacterial_Package_final_bact_asn [_draw_="c 7 -#000000 B 25 1027.88 1160.57 1017.63 1158.33 1009.25 1155.52 1004 1152 993.1 1144.69 990 1139.12 990 1126 990 1126 990 1126 \ 990 989 990 916.65 951.86 898.95 966 828 970.99 802.99 980.24 799.29 988 775 1005.56 720.03 1017.72 705.64 1015 648 1010.11 544.1 \ 1001.73 518.65 993 415 991.95 402.54 990.91 388.45 990.16 377.78 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 992.61 377.74 989.68 370.93 987.72 378.09 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1020.5 763.1 0 53 11 -gc_assembly ", label=gc_assembly, lp="1020.5,765", pos="e,989.57,369.42 1027.9,1160.6 1017.6,1158.3 1009.3,1155.5 1004,1152 993.1,1144.7 990,1139.1 990,1126 990,1126 990,1126 990,989 990,\ 916.65 951.86,898.95 966,828 970.99,802.99 980.24,799.29 988,775 1005.6,720.03 1017.7,705.64 1015,648 1010.1,544.1 1001.7,518.65 \ 993,415 991.95,402.54 990.91,388.45 990.16,377.78"]; Create_Genomic_BLASTdb [_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 1071.5 1115.5 1071.5 1134.5 1168.5 1134.5 1168.5 1115.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1120 1122.5 0 81 14 -gp_makeblastdb ", fillcolor="#F3CEA1", height=0.27778, label=gp_makeblastdb, pos="1120,1125", rects="1071.5,1115.5,1168.5,1134.5", width=1.3472]; genomic_source -> Create_Genomic_BLASTdb [_draw_="c 7 -#000000 B 7 1114.79 1160.66 1111.04 1158.38 1107.68 1155.54 1105 1152 1102.33 1148.47 1103.08 1144.41 1105.29 1140.57 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1107.07 1142.27 1109.45 1135.25 1103.21 1139.25 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1127 1145.6 0 44 9 -asn_cache ", label=asn_cache, lp="1127,1147.5", pos="e,1110.4,1134.1 1114.8,1160.7 1111,1158.4 1107.7,1155.5 1105,1152 1102.3,1148.5 1103.1,1144.4 1105.3,1140.6"]; genomic_source -> Create_Genomic_BLASTdb [_draw_="c 7 -#000000 B 7 1106.16 1160.56 1098.19 1158.3 1091.79 1155.48 1089 1152 1085.23 1147.3 1087.47 1142.83 1092.11 1138.96 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1093.25 1141.15 1097.74 1135.25 1090.55 1137.06 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1095.5 1145.6 0 13 3 -ids ", label=ids, lp="1095.5,1147.5", pos="e,1099,1134.4 1106.2,1160.6 1098.2,1158.3 1091.8,1155.5 1089,1152 1085.2,1147.3 1087.5,1142.8 1092.1,1139"]; genomic_source -> bacterial_ncrna [_draw_="c 7 -#000000 B 25 1322.34 1163.01 1398.38 1159.98 1490.95 1156.08 1574 1152 1707.39 1145.45 1743.94 1165.3 1874 1135 1916.4 1125.12 \ 1930.31 1120.87 1961 1090 1969.03 1081.93 1967.37 1076.07 1977 1070 2036.4 1032.56 2065.18 1063.21 2133 1045 2171.22 1034.74 2176.5 \ 1020.65 2214 1008 2299.92 979.01 2323.22 975.71 2413 963 2472.91 954.52 2540.4 950.25 2594.99 948.12 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2594.87 950.57 2601.78 947.86 2594.69 945.68 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2037 1055.6 0 44 9 -asn_cache ", label=asn_cache, lp="2037,1057.5", pos="e,2603.3,947.81 1322.3,1163 1398.4,1160 1491,1156.1 1574,1152 1707.4,1145.4 1743.9,1165.3 1874,1135 1916.4,1125.1 1930.3,1120.9 \ 1961,1090 1969,1081.9 1967.4,1076.1 1977,1070 2036.4,1032.6 2065.2,1063.2 2133,1045 2171.2,1034.7 2176.5,1020.7 2214,1008 2299.9,\ 979.01 2323.2,975.71 2413,963 2472.9,954.52 2540.4,950.25 2595,948.12"]; genomic_source -> bacterial_ncrna [_draw_="c 7 -#000000 B 16 1322.34 1165.02 1455.5 1161.48 1635.85 1156.22 1708 1152 1796.17 1146.84 1821.77 1161.59 1906 1135 1960.88 1117.68 \ 1963.95 1089.77 2018 1070 2021.74 1068.63 2155.09 1045.7 2159 1045 2337.61 1012.85 2549.16 973.98 2646.74 956.01 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2647.04 958.44 2653.48 954.76 2646.16 953.62 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2126 1055.6 0 28 6 -seqids ", label=seqids, lp="2126,1057.5", pos="e,2655,954.49 1322.3,1165 1455.5,1161.5 1635.9,1156.2 1708,1152 1796.2,1146.8 1821.8,1161.6 1906,1135 1960.9,1117.7 1963.9,1089.8 \ 2018,1070 2021.7,1068.6 2155.1,1045.7 2159,1045 2337.6,1012.9 2549.2,973.98 2646.7,956.01"]; genomic_source -> ab_initio_training [_draw_="c 7 -#000000 B 31 1322.18 1165.04 1391.74 1162.45 1465.34 1158.35 1499 1152 1522.48 1147.57 1529.38 1147.07 1550 1135 1561.4 1128.32 \ 1560.2 1120.94 1572 1115 1578.42 1111.77 1691.99 1091.62 1699 1090 1732.61 1082.22 1740.35 1077.61 1774 1070 1792.96 1065.71 1798.45 \ 1067.82 1817 1062 1855.15 1050.04 1861.58 1039.08 1899 1025 1917.92 1017.88 2057.13 984.51 2073 972 2094.74 954.87 2081.34 933.89 \ 2104 918 2107.68 915.42 2113.86 913.2 2121.4 911.29 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2121.59 913.75 2127.87 909.81 2120.51 908.98 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1921 1033.1 0 44 9 -asn_cache ", label=asn_cache, lp="1921,1035", pos="e,2129.4,909.48 1322.2,1165 1391.7,1162.5 1465.3,1158.3 1499,1152 1522.5,1147.6 1529.4,1147.1 1550,1135 1561.4,1128.3 1560.2,1120.9 \ 1572,1115 1578.4,1111.8 1692,1091.6 1699,1090 1732.6,1082.2 1740.4,1077.6 1774,1070 1793,1065.7 1798.5,1067.8 1817,1062 1855.2,1050 \ 1861.6,1039.1 1899,1025 1917.9,1017.9 2057.1,984.51 2073,972 2094.7,954.87 2081.3,933.89 2104,918 2107.7,915.42 2113.9,913.2 2121.4,\ 911.29"]; genomic_source -> bacterial_mobile_elem [_draw_="c 7 -#000000 B 31 1322.15 1163.31 1372.25 1160.65 1420.91 1156.96 1445 1152 1456.57 1149.62 1458.82 1146.8 1470 1143 1481.05 1139.25 \ 1484.79 1140.65 1495 1135 1499.9 1132.29 1566.9 1072.32 1572 1070 1593.28 1060.32 1601.25 1067.42 1624 1062 1686.75 1047.05 1702.63 \ 1042.23 1762 1017 1776.82 1010.7 1785.7 1013.8 1794 1000 1798.58 992.38 1799.71 986.81 1794 980 1780.95 964.43 1766.1 982.97 1749 \ 972 1744.9 969.37 1741.48 965.44 1738.76 961.42 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1741.04 960.48 1735.39 955.68 1736.82 962.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1674 1055.6 0 28 6 -seqids ", label=seqids, lp="1674,1057.5", pos="e,1734.6,954.37 1322.1,1163.3 1372.2,1160.7 1420.9,1157 1445,1152 1456.6,1149.6 1458.8,1146.8 1470,1143 1481,1139.2 1484.8,1140.6 \ 1495,1135 1499.9,1132.3 1566.9,1072.3 1572,1070 1593.3,1060.3 1601.3,1067.4 1624,1062 1686.8,1047 1702.6,1042.2 1762,1017 1776.8,\ 1010.7 1785.7,1013.8 1794,1000 1798.6,992.38 1799.7,986.81 1794,980 1781,964.43 1766.1,982.97 1749,972 1744.9,969.37 1741.5,965.44 \ 1738.8,961.42"]; genomic_source -> bacterial_mobile_elem [_draw_="c 7 -#000000 B 28 1322.4 1164.53 1362.29 1162.02 1399.15 1158.11 1418 1152 1467.39 1136 1473.4 1118.18 1517 1090 1530.46 1081.3 \ 1533.24 1078.21 1547 1070 1560.83 1061.75 1564.22 1059.39 1579 1053 1624.67 1033.26 1640.19 1038.61 1685 1017 1691.66 1013.79 1692.01 \ 1010.42 1699 1008 1716.72 1001.87 1770.39 1013.87 1783 1000 1817.32 962.25 1747.69 980.88 1738 972 1735.29 969.51 1733.58 966.1 \ 1732.52 962.56 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1734.98 962.39 1731.31 955.94 1730.16 963.27 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1601 1055.6 0 44 9 -asn_cache ", label=asn_cache, lp="1601,1057.5", pos="e,1731,954.45 1322.4,1164.5 1362.3,1162 1399.2,1158.1 1418,1152 1467.4,1136 1473.4,1118.2 1517,1090 1530.5,1081.3 1533.2,1078.2 \ 1547,1070 1560.8,1061.7 1564.2,1059.4 1579,1053 1624.7,1033.3 1640.2,1038.6 1685,1017 1691.7,1013.8 1692,1010.4 1699,1008 1716.7,\ 1001.9 1770.4,1013.9 1783,1000 1817.3,962.25 1747.7,980.88 1738,972 1735.3,969.51 1733.6,966.1 1732.5,962.56"]; genomic_source -> Prepare_Unannotated_Sequences [_draw_="c 7 -#000000 B 7 1163.95 1160.62 1163.73 1154.9 1164.51 1147.55 1169 1143 1171.28 1140.69 1174.94 1138.7 1179.55 1136.98 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1180.12 1139.37 1186.07 1134.94 1178.66 1134.69 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1195.5 1145.6 0 53 11 -gc_assembly ", label=gc_assembly, lp="1195.5,1147.5", pos="e,1187.5,1134.5 1164,1160.6 1163.7,1154.9 1164.5,1147.5 1169,1143 1171.3,1140.7 1174.9,1138.7 1179.6,1137"]; genomic_source -> Prepare_Unannotated_Sequences [_draw_="c 7 -#000000 B 10 1197.98 1160.57 1205.09 1158.22 1212.44 1155.37 1219 1152 1224.93 1148.96 1225.22 1146.33 1231 1143 1234.18 1141.17 \ 1237.58 1139.42 1241.03 1137.79 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1241.77 1140.15 1247.15 1135.04 1239.76 1135.68 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1237.5 1145.6 0 13 3 -ids ", label=ids, lp="1237.5,1147.5", pos="e,1248.5,1134.4 1198,1160.6 1205.1,1158.2 1212.4,1155.4 1219,1152 1224.9,1149 1225.2,1146.3 1231,1143 1234.2,1141.2 1237.6,1139.4 \ 1241,1137.8"]; genomic_source -> Prepare_Unannotated_Sequences [_draw_="c 7 -#000000 B 7 1218.5 1160.56 1226.27 1158.33 1234 1155.53 1241 1152 1244.39 1150.29 1250.42 1145.24 1256.18 1140.04 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1257.61 1142.06 1261.09 1135.51 1254.28 1138.46 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1274 1145.6 0 44 9 -asn_cache ", label=asn_cache, lp="1274,1147.5", pos="e,1262.2,1134.5 1218.5,1160.6 1226.3,1158.3 1234,1155.5 1241,1152 1244.4,1150.3 1250.4,1145.2 1256.2,1140"]; genomic_source -> Prepare_Unannotated_Sequences [_draw_="c 7 -#000000 B 7 1278.67 1160.54 1285.56 1158.28 1290.95 1155.48 1294 1152 1297.47 1148.04 1295.9 1143.76 1292.31 1139.83 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1294.05 1138.09 1287.13 1135.4 1290.86 1141.81 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1322 1145.6 0 54 12 -submit_block ", label=submit_block, lp="1322,1147.5", pos="e,1286,1134.4 1278.7,1160.5 1285.6,1158.3 1290.9,1155.5 1294,1152 1297.5,1148 1295.9,1143.8 1292.3,1139.8"]; genomic_source -> Final_Bacterial_Package_dumb_down_as_required [_draw_="c 7 -#000000 B 49 1009.4 1160.51 973.77 1157.89 945.25 1154.92 942 1152 928.23 1139.61 931.17 1088.05 927 1070 924.4 1058.76 922.53 \ 1056.26 920 1045 911.89 1008.93 930.24 990.91 906 963 898.35 954.19 890.39 961.92 881 955 872.26 948.56 875.86 941.26 867 935 856.08 \ 927.29 847.88 936.01 838 927 822.2 912.59 827.41 902.4 821 882 807.4 838.7 813.16 825.01 796 783 789 765.85 779.83 764.88 775 747 \ 773.96 743.14 772.9 741.4 775 738 779.18 731.24 786.82 736.76 791 730 795.67 722.44 791.93 718.84 791 710 788.32 684.47 779 679.17 \ 779 653.5 779 653.5 779 653.5 779 359 779 349.84 781.74 340.03 784.7 332.09 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 786.92 333.15 787.31 325.74 782.39 331.28 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 797 740.6 0 44 9 -asn_cache ", label=asn_cache, lp="797,742.5", pos="e,787.89,324.34 1009.4,1160.5 973.77,1157.9 945.25,1154.9 942,1152 928.23,1139.6 931.17,1088 927,1070 924.4,1058.8 922.53,1056.3 \ 920,1045 911.89,1008.9 930.24,990.91 906,963 898.35,954.19 890.39,961.92 881,955 872.26,948.56 875.86,941.26 867,935 856.08,927.29 \ 847.88,936.01 838,927 822.2,912.59 827.41,902.4 821,882 807.4,838.7 813.16,825.01 796,783 789,765.85 779.83,764.88 775,747 773.96,\ 743.14 772.9,741.4 775,738 779.18,731.24 786.82,736.76 791,730 795.67,722.44 791.93,718.84 791,710 788.32,684.47 779,679.17 779,\ 653.5 779,653.5 779,653.5 779,359 779,349.84 781.74,340.03 784.7,332.09"]; genomic_source -> Prepare_Unannotated_Sequences_asndisc_cpp [_draw_="c 7 -#000000 B 13 1322.24 1166.4 1366.55 1164.04 1404.78 1159.74 1412 1152 1424.53 1138.58 1412.57 1085.01 1402 1070 1398.31 1064.76 \ 1393.02 1067.65 1390 1062 1387.99 1058.24 1388.82 1054.28 1390.91 1050.61 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1392.73 1052.26 1395.12 1045.24 1388.87 1049.24 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1436 1100.6 0 44 9 -asn_cache ", label=asn_cache, lp="1436,1102.5", pos="e,1396.1,1044 1322.2,1166.4 1366.5,1164 1404.8,1159.7 1412,1152 1424.5,1138.6 1412.6,1085 1402,1070 1398.3,1064.8 1393,1067.7 1390,\ 1062 1388,1058.2 1388.8,1054.3 1390.9,1050.6"]; Get_Order_Specific_Strings [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2187 1160.5 2187 1179.5 2335 1179.5 2335 1160.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2261 1167.5 0 132 26 -Get_Order_Specific_Strings ", height=0.27778, label=Get_Order_Specific_Strings, pos="2261,1170", rects="2187,1160.5,2335,1179.5", width=2.0556]; Get_Order_Specific_Strings -> Get_Proteins [_draw_="c 7 -#000000 B 4 2236.5 1160.5 2217.31 1153.85 2190.44 1144.53 2169.46 1137.26 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2170.29 1134.95 2162.88 1134.97 2168.69 1139.58 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2263 1145.6 0 106 26 -all_order_specific_blastdb ", label=all_order_specific_blastdb, lp="2263,1147.5", pos="e,2161.4,1134.5 2236.5,1160.5 2217.3,1153.8 2190.4,1144.5 2169.5,1137.3"]; genus_list_file2ints [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3344 755.5 3344 774.5 3454 774.5 3454 755.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3399 762.5 0 94 20 -genus_list_file2ints ", height=0.27778, label=genus_list_file2ints, pos="3399,765", rects="3344,755.5,3454,774.5", width=1.5278]; genus_list_file2ints -> bacterial_orthology_conditional [_draw_="c 7 -#000000 B 22 3399.56 755.7 3400.51 741.32 3402.38 710.81 3403 685 3403.4 668.55 3407.29 663.58 3402 648 3397.16 633.76 3392.19 \ 631.9 3383 620 3380.11 616.26 3377.99 616.28 3376 612 3371.07 601.4 3372 597.69 3372 586 3372 586 3372 586 3372 494 3372 466.37 \ 1605.84 453.9 1210.06 451.46 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1210.33 449.01 1203.32 451.42 1210.3 453.91 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3397 605.6 0 42 10 -genus_list ", label=genus_list, lp="3397,607.5", pos="e,1201.8,451.41 3399.6,755.7 3400.5,741.32 3402.4,710.81 3403,685 3403.4,668.55 3407.3,663.58 3402,648 3397.2,633.76 3392.2,631.9 \ 3383,620 3380.1,616.26 3378,616.28 3376,612 3371.1,601.4 3372,597.69 3372,586 3372,586 3372,586 3372,494 3372,466.37 1605.8,453.9 \ 1210.1,451.46"]; genus_list_file2ints -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 13 3398.08 755.57 3395.52 732.87 3388.12 671.7 3382 665 3372.69 654.81 3362.09 666.41 3352 657 3317.97 625.28 3355.36 \ 585.73 3318 558 3307.32 550.07 3183.26 545.79 3066.67 543.51 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3066.85 541.06 3059.81 543.38 3066.76 545.96 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3373 650.6 0 42 10 -genus_list ", label=genus_list, lp="3373,652.5", pos="e,3058.3,543.35 3398.1,755.57 3395.5,732.87 3388.1,671.7 3382,665 3372.7,654.81 3362.1,666.41 3352,657 3318,625.28 3355.4,585.73 \ 3318,558 3307.3,550.07 3183.3,545.79 3066.7,543.51"]; genus_list_file2ints -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 10 3344.31 759.21 3270.52 752.99 3134.97 742.41 3019 738 2555.32 720.38 2438.88 741.01 1975 730 1966.67 729.8 1958.17 \ 729.58 1949.58 729.33 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1949.91 726.88 1942.84 729.12 1949.76 731.78 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3196 740.6 0 42 10 -genus_list ", label=genus_list, lp="3196,742.5", pos="e,1941.3,729.08 3344.3,759.21 3270.5,752.99 3135,742.41 3019,738 2555.3,720.38 2438.9,741.01 1975,730 1966.7,729.8 1958.2,729.58 \ 1949.6,729.33"]; Final_Bacterial_Package_asn_cleanup [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1001.5 395.5 1001.5 414.5 1078.5 414.5 1078.5 395.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1040 402.5 0 61 11 -asn_cleanup ", height=0.27778, label=asn_cleanup, pos="1040,405", rects="1001.5,395.5,1078.5,414.5", width=1.0694]; bacterial_orthology_conditional -> Final_Bacterial_Package_asn_cleanup [_draw_="c 7 -#000000 B 4 1113.82 440.5 1100.09 434.09 1081.05 425.19 1065.75 418.04 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1066.89 415.86 1059.51 415.12 1064.81 420.3 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1125 425.6 0 62 14 -inp_annotation ", label=inp_annotation, lp="1125,427.5", pos="e,1058.1,414.48 1113.8,440.5 1100.1,434.09 1081.1,425.19 1065.8,418.04"]; add_checksum_gbent [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 617 125.5 617 144.5 739 144.5 739 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 678 132.5 0 106 18 -add_checksum_gbent ", height=0.27778, label=add_checksum_gbent, pos="678,135", rects="617,125.5,739,144.5", width=1.6944]; add_checksum_gbent -> gbent [_draw_="c 7 -#000000 B 7 691.36 125.68 702.31 118.83 718.2 108.85 732 100 734.04 98.69 736.17 97.31 738.29 95.94 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 739.54 98.05 744.07 92.17 736.86 93.94 ", pos="e,745.33,91.344 691.36,125.68 702.31,118.83 718.2,108.85 732,100 734.04,98.689 736.17,97.314 738.29,95.938"]; ab_initio_antifam -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 10 1826.7 845.5 1839.19 843.22 1852.09 840.41 1864 837 1969.45 806.79 2212.82 671.36 2320 648 2353.83 640.63 2416.94 \ 636.28 2486.11 633.76 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2486.15 636.21 2493.06 633.51 2485.98 631.31 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2149.5 740.6 0 113 26 -good_ab_initio_annotations ", label=good_ab_initio_annotations, lp="2149.5,742.5", pos="e,2494.6,633.46 1826.7,845.5 1839.2,843.22 1852.1,840.41 1864,837 1969.4,806.79 2212.8,671.36 2320,648 2353.8,640.63 2416.9,636.28 \ 2486.1,633.76"]; ab_initio_antifam -> orfs_hmms [_draw_="c 7 -#000000 B 4 1727.62 845.5 1699.74 838.61 1660.31 828.87 1630.45 821.49 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1631.16 819.14 1623.77 819.84 1629.98 823.9 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1713 830.6 0 46 10 -annotation ", label=annotation, lp="1713,832.5", pos="e,1622.3,819.48 1727.6,845.5 1699.7,838.61 1660.3,828.87 1630.5,821.49"]; spurious_annot_prelim -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 4 1723.17 755.71 1727.33 750.12 1732.94 742.58 1737.87 735.96 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1739.73 737.56 1741.95 730.48 1735.8 734.63 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1758.5 740.6 0 47 11 -prot_ids_B2 ", label=prot_ids_B2, lp="1758.5,742.5", pos="e,1742.8,729.27 1723.2,755.71 1727.3,750.12 1732.9,742.58 1737.9,735.96"]; add_checksum_sqn -> sqn [_draw_="c 7 -#000000 B 7 422.17 125.55 387.69 118.49 342.76 108.29 326 100 323.87 98.95 321.76 97.65 319.75 96.24 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 321.59 94.57 314.58 92.16 318.56 98.42 ", pos="e,313.39,91.224 422.17,125.55 387.69,118.49 342.76,108.29 326,100 323.87,98.947 321.76,97.646 319.75,96.236"]; spurious_annot_final -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 10 2870.19 575.63 2872.94 573.21 2875.47 570.31 2877 567 2878.68 563.37 2878.63 561.65 2877 558 2876.68 557.29 2876.32 \ 556.6 2875.92 555.93 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2877.87 554.45 2871.51 550.64 2874.11 557.58 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2954 560.6 0 152 37 -Good_AntiFam_filtered_proteins_gilist ", label=Good_AntiFam_filtered_proteins_gilist, lp="2954,562.5", pos="e,2870.5,549.47 2870.2,575.63 2872.9,573.21 2875.5,570.31 2877,567 2878.7,563.37 2878.6,561.65 2877,558 2876.7,557.29 2876.3,556.6 \ 2875.9,555.93"]; spurious_annot_final -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 10 2838.19 575.69 2834.91 573.36 2831.93 570.49 2830 567 2828.07 563.5 2828.04 561.49 2830 558 2830.61 556.92 2831.32 \ 555.89 2832.11 554.93 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2833.56 556.92 2837.11 550.4 2830.27 553.29 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2853 560.6 0 46 10 -annotation ", label=annotation, lp="2853,562.5", pos="e,2838.2,549.39 2838.2,575.69 2834.9,573.36 2831.9,570.49 2830,567 2828.1,563.5 2828,561.49 2830,558 2830.6,556.92 2831.3,555.89 \ 2832.1,554.93"]; Validate_Annotation_xsltproc_asnvalidate [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3646 72.5 3646 91.5 3702 91.5 3702 72.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3674 79.5 0 40 8 -xsltproc ", height=0.27778, label=xsltproc, pos="3674,82", rects="3646,72.5,3702,91.5", width=0.77778]; Validate_Annotation_xsltproc_asnvalidate -> Validate_Annotation_collect_annot_stats [_draw_="c 7 -#000000 B 4 3674 72.7 3674 61.64 3674 41.85 3674 27.66 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3676.45 27.81 3674 20.81 3671.55 27.81 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3685 30.6 0 22 5 -input ", label=input, lp="3685,32.5", pos="e,3674,19.294 3674,72.695 3674,61.644 3674,41.85 3674,27.661"]; Validate_Annotation_bact_univ_prot_stats -> Validate_Annotation_collect_annot_stats [_draw_="c 7 -#000000 B 13 3651.45 305.62 3660.47 298.91 3673.27 289.14 3684 280 3715.88 252.85 3739 245.38 3739 203.5 3739 203.5 3739 203.5 \ 3739 81 3739 55.82 3716.13 35.88 3697.52 23.83 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3698.94 21.82 3691.69 20.24 3696.37 26 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3750 178.1 0 22 5 -input ", label=input, lp="3750,180", pos="e,3690.4,19.451 3651.4,305.62 3660.5,298.91 3673.3,289.14 3684,280 3715.9,252.85 3739,245.38 3739,203.5 3739,203.5 3739,203.5 3739,\ 81 3739,55.818 3716.1,35.882 3697.5,23.828"]; Validate_Annotation_bact_univ_prot_stats -> Validate_Annotation_collect_annot_details [_draw_="c 7 -#000000 B 4 3643.45 305.56 3649.43 290.94 3661.82 260.66 3669.47 241.96 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3671.66 243.09 3672.04 235.68 3667.12 241.24 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3672 268.1 0 22 5 -input ", label=input, lp="3672,270", pos="e,3672.6,234.28 3643.5,305.56 3649.4,290.94 3661.8,260.66 3669.5,241.96"]; bacterial_annot_2nd_pass_blastp -> Add_Locus_Tags [_draw_="c 7 -#000000 B 4 2657.68 530.95 2406.17 520.84 1989.74 504.11 1842.01 498.17 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1842.11 495.72 1835.02 497.89 1841.92 500.62 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2429 515.6 0 22 5 -input ", label=input, lp="2429,517.5", pos="e,1833.5,497.83 2657.7,530.95 2406.2,520.84 1989.7,504.11 1842,498.17"]; Generate_Annotation_Reports_nuc_fasta [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 715.5 170.5 715.5 189.5 780.5 189.5 780.5 170.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 748 177.5 0 49 9 -asn2fasta ", height=0.27778, label=asn2fasta, pos="748,180", rects="715.5,170.5,780.5,189.5", width=0.90278]; Generate_Annotation_Reports_nuc_fasta -> nucleotide_fasta [_draw_="c 7 -#000000 B 7 780.32 171.59 787.45 169.16 794.74 166.02 801 162 827.5 144.97 850.52 115.79 863.01 98.06 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 864.9 99.64 866.85 92.48 860.87 96.86 ", pos="e,867.71,91.233 780.32,171.59 787.45,169.16 794.74,166.02 801,162 827.5,144.97 850.52,115.79 863.01,98.062"]; Generate_Annotation_Reports_nuc_fasta -> ping_stop [_draw_="c 7 -#000000 B 7 747.63 170.68 747.76 165.26 748.68 158.25 752 153 752.67 151.95 753.42 150.94 754.25 149.99 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 755.77 151.91 759.34 145.4 752.49 148.27 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 762.5 155.6 0 21 6 -infile ", label=infile, lp="762.5,157.5", pos="e,760.46,144.39 747.63,170.68 747.76,165.26 748.68,158.25 752,153 752.67,151.95 753.42,150.94 754.25,149.99"]; Final_Bacterial_Package_std_validation -> Final_Bacterial_Package_asnvalidate_evaluate [_draw_="c 7 -#000000 B 13 854.26 170.53 852.83 170.34 851.4 170.16 850 170 754.99 159.2 730.52 166.36 635 162 495.39 155.62 460.09 158.67 \ 321 145 316.6 144.57 312.04 144.05 307.47 143.49 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 308.04 141.09 300.78 142.62 307.41 145.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 646 155.6 0 22 5 -input ", label=input, lp="646,157.5", pos="e,299.28,142.43 854.26,170.53 852.83,170.34 851.4,170.16 850,170 754.99,159.2 730.52,166.36 635,162 495.39,155.62 460.09,158.67 \ 321,145 316.6,144.57 312.04,144.05 307.47,143.49"]; Final_Bacterial_Package_std_validation -> Final_Bacterial_Package_asndisc_evaluate [_draw_="c 7 -#000000 B 13 854.25 170.67 852.81 170.43 851.4 170.21 850 170 818.16 165.19 806.6 176.79 778 162 773.25 159.54 774.86 155.25 \ 770 153 753.01 145.14 470.13 146.87 413.42 144.87 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 413.71 142.43 406.59 144.48 413.44 147.32 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 789 155.6 0 22 5 -input ", label=input, lp="789,157.5", pos="e,405.08,144.4 854.25,170.67 852.81,170.43 851.4,170.21 850,170 818.16,165.19 806.6,176.79 778,162 773.25,159.54 774.86,155.25 770,\ 153 753.01,145.14 470.13,146.87 413.42,144.87"]; Validate_Annotation_xsltproc_asndisc [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3568 125.5 3568 144.5 3624 144.5 3624 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3596 132.5 0 40 8 -xsltproc ", height=0.27778, label=xsltproc, pos="3596,135", rects="3568,125.5,3624,144.5", width=0.77778]; Final_Bacterial_Package_std_validation -> Validate_Annotation_xsltproc_asndisc [_draw_="c 7 -#000000 B 7 939.48 170.52 941 170.32 942.51 170.15 944 170 1215.76 142.46 3262.15 136.76 3559.91 136.08 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3559.7 138.53 3566.69 136.06 3559.69 133.63 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1397.5 155.6 0 15 3 -xml ", label=xml, lp="1397.5,157.5", pos="e,3568.2,136.06 939.48,170.52 941,170.32 942.51,170.15 944,170 1215.8,142.46 3262.2,136.76 3559.9,136.08"]; Final_Bacterial_Package_val_stats [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 3628.5 125.5 3628.5 144.5 3689.5 144.5 3689.5 125.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 3659 132.5 0 45 9 -val_stats ", height=0.27778, label=val_stats, pos="3659,135", rects="3628.5,125.5,3689.5,144.5", width=0.84722]; Final_Bacterial_Package_std_validation -> Final_Bacterial_Package_val_stats [_draw_="c 7 -#000000 B 7 939.48 170.51 941 170.32 942.51 170.15 944 170 1089.97 155.46 3405.69 164.62 3620.29 145.34 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3620.48 147.78 3627.17 144.59 3619.95 142.91 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3373 155.6 0 40 9 -annot_val ", label=annot_val, lp="3373,157.5", pos="e,3628.7,144.43 939.48,170.51 941,170.32 942.51,170.15 944,170 1090,155.46 3405.7,164.62 3620.3,145.34"]; Final_Bacterial_Package_asndisc_evaluate -> final_asndisc_error_diag [_draw_="c 7 -#000000 B 4 339.73 125.58 314.94 116.98 276.32 103.58 249.03 94.11 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 250.16 91.91 242.74 91.93 248.55 96.54 ", pos="e,241.31,91.434 339.73,125.58 314.94,116.98 276.32,103.58 249.03,94.114"]; bacterial_annot_1st_pass -> protein_alignment [_draw_="c 7 -#000000 B 4 1749 710.71 1749 705.59 1749 698.85 1749 692.67 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1751.45 692.78 1749 685.78 1746.55 692.78 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1779 695.6 0 60 12 -compartments ", label=compartments, lp="1779,697.5", pos="e,1749,684.27 1749,710.71 1749,705.59 1749,698.85 1749,692.67"]; protein_alignment -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 7 1805.62 665.55 1848.67 659.51 1909.43 651.8 1963 648 2061.57 641.01 2293.49 636.62 2486.4 634.05 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2486.21 636.51 2493.18 633.96 2486.15 631.61 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1986 650.6 0 46 11 -prot_aligns ", label=prot_aligns, lp="1986,652.5", pos="e,2494.7,633.94 1805.6,665.55 1848.7,659.51 1909.4,651.8 1963,648 2061.6,641.01 2293.5,636.62 2486.4,634.05"]; orfs_hmms -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 16 1758.51 800.52 1786.84 798.22 1811.64 795.4 1826 792 1845.2 787.46 1849.33 783.77 1867 775 1902.5 757.37 1911.57 \ 752.8 1944 730 1990.46 697.34 1988.84 667.99 2042 648 2063.42 639.94 2288.6 635.6 2486.01 633.33 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2486.02 635.78 2492.99 633.25 2485.96 630.88 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1991.5 718.1 0 49 10 -hmm_aligns ", label=hmm_aligns, lp="1991.5,720", pos="e,2494.5,633.23 1758.5,800.52 1786.8,798.22 1811.6,795.4 1826,792 1845.2,787.46 1849.3,783.77 1867,775 1902.5,757.37 1911.6,752.8 \ 1944,730 1990.5,697.34 1988.8,667.99 2042,648 2063.4,639.94 2288.6,635.6 2486,633.33"]; orfs_hmms -> spurious_annot_prelim [_draw_="c 7 -#000000 B 10 1479.7 800.59 1472.61 798.34 1467.07 795.52 1464 792 1461.37 788.99 1461.27 785.92 1464 783 1464.84 782.1 1589.33 \ 774.07 1663.35 769.38 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1663.33 771.84 1670.16 768.95 1663.02 766.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1522 785.6 0 116 27 -Extract_ORF_Proteins_seqids ", label=Extract_ORF_Proteins_seqids, lp="1522,787.5", pos="e,1671.7,768.85 1479.7,800.59 1472.6,798.34 1467.1,795.52 1464,792 1461.4,788.99 1461.3,785.92 1464,783 1464.8,782.1 1589.3,774.07 \ 1663.3,769.38"]; orfs_hmms -> spurious_annot_prelim [_draw_="c 7 -#000000 B 7 1585.81 800.7 1584.84 795.01 1584.74 787.68 1589 783 1598.97 772.05 1632.72 767.88 1663.07 766.4 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1663.11 768.85 1670 766.11 1662.9 763.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1650.5 785.6 0 123 29 -Extract_ORF_Proteins_proteins ", label=Extract_ORF_Proteins_proteins, lp="1650.5,787.5", pos="e,1671.5,766.05 1585.8,800.7 1584.8,795.01 1584.7,787.68 1589,783 1599,772.05 1632.7,767.88 1663.1,766.4"]; orfs_hmms -> spurious_annot_prelim [_draw_="c 7 -#000000 B 7 1688.59 800.51 1697.6 798.3 1704.88 795.51 1709 792 1711.87 789.55 1713.73 786.1 1714.93 782.51 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1717.3 783.13 1716.37 775.77 1712.51 782.1 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1767 785.6 0 106 25 -Extract_ORF_Proteins_lds2 ", label=Extract_ORF_Proteins_lds2, lp="1767,787.5", pos="e,1716.7,774.29 1688.6,800.51 1697.6,798.3 1704.9,795.51 1709,792 1711.9,789.55 1713.7,786.1 1714.9,782.51"]; orfs_hmms -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 19 1464.97 800.51 1448.45 798.23 1436.07 795.43 1433 792 1430.33 789.02 1430.82 786.35 1433 783 1437.77 775.66 1444.55 \ 780.92 1451 775 1458.47 768.14 1455.69 762.94 1462 755 1469.05 746.13 1470.55 742.38 1481 738 1495.15 732.07 1519.74 728.07 1548.46 \ 725.39 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1548.4 727.86 1555.16 724.81 1547.97 722.98 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1471 763.1 0 18 4 -lds2 ", label=lds2, lp="1471,765", pos="e,1556.7,724.67 1465,800.51 1448.4,798.23 1436.1,795.43 1433,792 1430.3,789.02 1430.8,786.35 1433,783 1437.8,775.66 1444.6,780.92 \ 1451,775 1458.5,768.14 1455.7,762.94 1462,755 1469.1,746.13 1470.5,742.38 1481,738 1495.2,732.07 1519.7,728.07 1548.5,725.39"]; orfs_hmms -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 19 1458.68 800.51 1452.16 798.23 1447.05 795.43 1444 792 1441.34 789.01 1441.53 786.14 1444 783 1453.33 771.14 1465.01 \ 784.17 1477 775 1485.06 768.84 1480.65 761.99 1488 755 1500.53 743.09 1506.3 742.51 1523 738 1534.28 734.95 1552.5 732.41 1573.83 \ 730.29 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1573.9 732.74 1580.64 729.64 1573.44 727.87 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1505 763.1 0 34 8 -proteins ", label=proteins, lp="1505,765", pos="e,1582.1,729.5 1458.7,800.51 1452.2,798.23 1447.1,795.43 1444,792 1441.3,789.01 1441.5,786.14 1444,783 1453.3,771.14 1465,784.17 \ 1477,775 1485.1,768.84 1480.6,761.99 1488,755 1500.5,743.09 1506.3,742.51 1523,738 1534.3,734.95 1552.5,732.41 1573.8,730.29"]; orfs_hmms -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 13 1475.46 800.56 1468.5 798.31 1463.07 795.5 1460 792 1457.36 788.99 1457.37 786.01 1460 783 1468.7 773.04 1505.99 \ 777.4 1519 775 1586.21 762.58 1663.37 743.45 1709.05 731.61 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1709.58 734 1715.74 729.87 1708.35 729.26 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1631 763.1 0 42 10 -prot_ids_A ", label=prot_ids_A, lp="1631,765", pos="e,1717.2,729.49 1475.5,800.56 1468.5,798.31 1463.1,795.5 1460,792 1457.4,788.99 1457.4,786.01 1460,783 1468.7,773.04 1506,777.4 \ 1519,775 1586.2,762.58 1663.4,743.45 1709.1,731.61"]; orfs_hmms -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 10 1765.82 803.8 1794.12 801.26 1815.87 797.51 1821 792 1830.38 781.91 1817.77 765.35 1783 738 1780.93 736.37 1778.67 \ 734.83 1776.34 733.4 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1777.86 731.44 1770.55 730.17 1775.47 735.72 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1843 763.1 0 46 10 -annotation ", label=annotation, lp="1843,765", pos="e,1769.2,729.43 1765.8,803.8 1794.1,801.26 1815.9,797.51 1821,792 1830.4,781.91 1817.8,765.35 1783,738 1780.9,736.37 1778.7,734.83 \ 1776.3,733.4"]; orfs_hmms -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 10 1460.95 800.5 1450.35 798.24 1439.9 795.44 1430 792 1410.77 785.32 1390.59 771.14 1403 755 1413.08 741.9 1477.87 \ 733.78 1548.71 728.79 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1548.6 731.25 1555.41 728.33 1548.26 726.36 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1426.5 763.1 0 47 11 -prot_ids_B1 ", label=prot_ids_B1, lp="1426.5,765", pos="e,1556.9,728.22 1461,800.5 1450.3,798.24 1439.9,795.44 1430,792 1410.8,785.32 1390.6,771.14 1403,755 1413.1,741.9 1477.9,733.78 \ 1548.7,728.79"]; Final_Bacterial_Package_asn_cleanup -> Final_Bacterial_Package_final_bact_asn [_draw_="c 7 -#000000 B 4 1030.17 395.71 1023.11 389.76 1013.44 381.61 1005.25 374.7 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1006.89 372.88 999.96 370.24 1003.73 376.63 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1042 380.6 0 46 10 -annotation ", label=annotation, lp="1042,382.5", pos="e,998.8,369.27 1030.2,395.71 1023.1,389.76 1013.4,381.61 1005.2,374.7"]; log_package_versions [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 2339 1160.5 2339 1179.5 2463 1179.5 2463 1160.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 2401 1167.5 0 108 20 -log_package_versions ", height=0.27778, label=log_package_versions, pos="2401,1170", rects="2339,1160.5,2463,1179.5", width=1.7222]; bacterial_noncoding -> ab_initio_training [_draw_="c 7 -#000000 B 10 2297.12 937.77 2285.03 936.82 2272.68 935.87 2261 935 2248.23 934.05 2154.74 936.37 2146 927 2140.47 921.07 2142.89 \ 916.4 2149.16 912.76 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2149.79 915.16 2155.18 910.07 2147.79 910.69 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2235.5 920.6 0 179 39 -Generate_16S_rRNA_Annotation_annotation ", label=Generate_16S_rRNA_Annotation_annotation, lp="2235.5,922.5", pos="e,2156.6,909.45 2297.1,937.77 2285,936.82 2272.7,935.87 2261,935 2248.2,934.05 2154.7,936.37 2146,927 2140.5,921.07 2142.9,916.4 \ 2149.2,912.76"]; bacterial_noncoding -> ab_initio_training [_draw_="c 7 -#000000 B 10 2351.53 935.57 2345.69 933.08 2339.49 930.16 2334 927 2328.22 923.67 2328.16 920.55 2322 918 2316.09 915.55 2309.88 \ 913.44 2303.53 911.63 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2304.29 909.29 2296.9 909.87 2303.04 914.03 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2432.5 920.6 0 197 43 -Post_process_CMsearch_annotations_annots_5S ", label=Post_process_CMsearch_annotations_annots_5S, lp="2432.5,922.5", pos="e,2295.4,909.49 2351.5,935.57 2345.7,933.08 2339.5,930.16 2334,927 2328.2,923.67 2328.2,920.55 2322,918 2316.1,915.55 2309.9,913.44 \ 2303.5,911.63"]; bacterial_noncoding -> ab_initio_training [_draw_="c 7 -#000000 B 10 2450.61 940.02 2486.42 937.36 2522.46 933.19 2528 927 2530.67 924.02 2530.75 920.9 2528 918 2522.55 912.26 2459.4 \ 908.28 2390.27 905.63 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2390.42 903.18 2383.33 905.36 2390.23 908.08 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2619.5 920.6 0 179 39 -Generate_23S_rRNA_Annotation_annotation ", label=Generate_23S_rRNA_Annotation_annotation, lp="2619.5,922.5", pos="e,2381.8,905.31 2450.6,940.02 2486.4,937.36 2522.5,933.19 2528,927 2530.7,924.02 2530.8,920.9 2528,918 2522.6,912.26 2459.4,908.28 \ 2390.3,905.63"]; Final_Bacterial_Package_sqn2gbent -> Generate_Annotation_Reports_prot_fasta [_draw_="c 7 -#000000 B 7 701.74 215.51 706.24 209.58 713.07 202.02 721 198 742.66 187.03 752.57 193.45 776.54 190.54 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 776.82 192.97 783.36 189.46 776.06 188.13 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 722.5 200.6 0 3 1 -i ", label=i, lp="722.5,202.5", pos="e,784.85,189.23 701.74,215.51 706.24,209.58 713.07,202.02 721,198 742.66,187.03 752.57,193.45 776.54,190.54"]; Final_Bacterial_Package_sqn2gbent -> Generate_Annotation_Reports_cds_prot_fasta [_draw_="c 7 -#000000 B 13 729.94 215.77 731.31 215.5 732.67 215.24 734 215 794.83 204.08 810.42 203.22 872 198 891.06 196.38 1026.65 198.07 \ 1044 190 1061.63 181.81 1075.96 164.28 1084.69 151.41 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1086.61 152.95 1088.35 145.74 1082.49 150.3 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1070.5 178.1 0 3 1 -i ", label=i, lp="1070.5,180", pos="e,1089.2,144.47 729.94,215.77 731.31,215.5 732.67,215.24 734,215 794.83,204.08 810.42,203.22 872,198 891.06,196.38 1026.7,198.07 \ 1044,190 1061.6,181.81 1076,164.28 1084.7,151.41"]; Final_Bacterial_Package_sqn2gbent -> Generate_Annotation_Reports_cds_nuc_fasta [_draw_="c 7 -#000000 B 10 662.23 222.05 645.44 219.96 625.3 215.68 609 207 599.57 201.98 597.14 199.37 592 190 585.65 178.42 582.66 163.71 \ 581.25 152.56 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 583.7 152.41 580.55 145.69 578.82 152.9 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 593.5 178.1 0 3 1 -i ", label=i, lp="593.5,180", pos="e,580.4,144.18 662.23,222.05 645.44,219.96 625.3,215.68 609,207 599.57,201.98 597.14,199.37 592,190 585.65,178.42 582.66,163.71 \ 581.25,152.56"]; Final_Bacterial_Package_sqn2gbent -> add_checksum_gbent [_draw_="c 7 -#000000 B 13 662.05 220.22 641.66 216.14 616.87 207.65 602 190 593.85 180.33 598.12 174.59 597 162 596.65 158.02 594.48 156.11 \ 597 153 598.73 150.87 606.66 148.49 616.93 146.21 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 617.34 148.62 623.69 144.79 616.34 143.83 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 613 178.1 0 22 5 -input ", label=input, lp="613,180", pos="e,625.18,144.48 662.05,220.22 641.66,216.14 616.87,207.65 602,190 593.85,180.33 598.12,174.59 597,162 596.65,158.02 594.48,156.11 \ 597,153 598.73,150.87 606.66,148.49 616.93,146.21"]; Final_Bacterial_Package_sqn2gbent -> Generate_Annotation_Reports_nuc_fasta [_draw_="c 7 -#000000 B 7 698.43 215.82 700.47 210.18 703.87 202.86 709 198 710.71 196.38 712.6 194.9 714.59 193.55 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 715.54 195.83 720.38 190.2 713.09 191.59 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 710.5 200.6 0 3 1 -i ", label=i, lp="710.5,202.5", pos="e,721.69,189.45 698.43,215.82 700.47,210.18 703.87,202.86 709,198 710.71,196.38 712.6,194.9 714.59,193.55"]; Final_Bacterial_Package_sqn2gbent -> ping_stop [_draw_="c 7 -#000000 B 7 692.73 215.88 688.76 204.55 683.66 183.86 693 170 696.23 165.22 723.34 154.75 745.9 146.68 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 746.44 149.09 752.22 144.45 744.81 144.47 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 703.5 178.1 0 21 6 -infile ", label=infile, lp="703.5,180", pos="e,753.65,143.94 692.73,215.88 688.76,204.55 683.66,183.86 693,170 696.23,165.22 723.34,154.75 745.9,146.68"]; Final_Bacterial_Package_sqn2gbent -> Final_Bacterial_Package_std_validation [_draw_="c 7 -#000000 B 7 706.83 215.6 716.52 208.1 729.31 198.26 730 198 752.96 189.36 812.55 192.71 845.77 190.26 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 845.77 192.72 852.5 189.6 845.29 187.85 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 739.5 200.6 0 19 4 -ingb ", label=ingb, lp="739.5,202.5", pos="e,854,189.45 706.83,215.6 716.52,208.1 729.31,198.26 730,198 752.96,189.36 812.55,192.71 845.77,190.26"]; Final_Bacterial_Package_sqn2gbent -> checkm [_draw_="c 7 -#000000 B 13 729.77 217.62 735.82 216.63 742.09 215.71 748 215 801.52 208.62 815.44 212.99 869 207 894.49 204.15 900.47 200.46 \ 926 198 1011.31 189.77 1270.53 183.72 1366.11 181.72 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1366.11 184.17 1373.06 181.57 1366.01 179.27 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 941.5 200.6 0 31 6 -models ", label=models, lp="941.5,202.5", pos="e,1374.6,181.54 729.77,217.62 735.82,216.63 742.09,215.71 748,215 801.52,208.62 815.44,212.99 869,207 894.49,204.15 900.47,200.46 \ 926,198 1011.3,189.77 1270.5,183.72 1366.1,181.72"]; Generate_Annotation_Reports_gbk [_draw_="c 7 -#000000 C 7 -#fafad2 P 4 626 170.5 626 189.5 682 189.5 682 170.5 ", _ldraw_="F 10 9 -Helvetica c 7 -#000000 T 654 177.5 0 40 8 -asn2flat ", height=0.27778, label=asn2flat, pos="654,180", rects="626,170.5,682,189.5", width=0.77778]; Final_Bacterial_Package_sqn2gbent -> Generate_Annotation_Reports_gbk [_draw_="c 7 -#000000 B 7 674.82 215.53 670.85 213.22 667 210.39 664 207 661.47 204.15 659.56 200.59 658.11 197.03 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 660.48 196.4 656 190.5 655.82 197.91 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 675 200.6 0 22 5 -input ", label=input, lp="675,202.5", pos="e,655.53,189.06 674.82,215.53 670.85,213.22 667,210.39 664,207 661.47,204.15 659.56,200.59 658.11,197.03"]; Final_Bacterial_Package_final_bact_asn -> Validate_Annotation_bact_univ_prot_stats [_draw_="c 7 -#000000 B 4 1031.99 358.3 1338.75 353.33 3194.47 323.23 3572.72 317.09 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3572.64 319.54 3579.6 316.98 3572.56 314.64 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2562 335.6 0 22 5 -input ", label=input, lp="2562,337.5", pos="e,3581.1,316.96 1032,358.3 1338.7,353.33 3194.5,323.23 3572.7,317.09"]; Final_Bacterial_Package_final_bact_asn -> Final_Bacterial_Package_dumb_down_as_required [_draw_="c 7 -#000000 B 7 946.1 354.32 924.34 351.52 897.6 347.45 874 342 856.93 338.06 838.29 332.27 823.1 327.16 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 823.9 324.84 816.48 324.89 822.31 329.48 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 897 335.6 0 46 10 -annotation ", label=annotation, lp="897,337.5", pos="e,815.05,324.4 946.1,354.32 924.34,351.52 897.6,347.45 874,342 856.93,338.06 838.29,332.27 823.1,327.16"]; passdata -> Validate_Annotation_proc_annot_stats [_draw_="c 7 -#000000 B 37 2693.32 1212.16 2798.37 1210.29 2966.6 1207.34 3112 1205 3126.94 1204.76 3636.89 1204.17 3650 1197 3683.2 1178.84 \ 3697 1163.84 3697 1126 3697 1126 3697 1126 3697 1056.5 3697 981.97 3703.84 963.36 3717 890 3726.25 838.42 3737.19 827.08 3743 775 \ 3743.99 766.17 3748.68 761.84 3743 755 3730.58 740.05 3712.42 761.95 3700 747 3682.17 725.55 3706 523.9 3706 496 3706 496 3706 496 \ 3706 336.5 3706 322.16 3708.65 315.61 3699 305 3690.86 296.05 3665.22 287.66 3641.32 281.46 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3642.16 279.14 3634.77 279.81 3640.96 283.89 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3733.5 740.6 0 67 15 -val_res_den_xml ", label=val_res_den_xml, lp="3733.5,742.5", pos="e,3633.3,279.44 2693.3,1212.2 2798.4,1210.3 2966.6,1207.3 3112,1205 3126.9,1204.8 3636.9,1204.2 3650,1197 3683.2,1178.8 3697,1163.8 \ 3697,1126 3697,1126 3697,1126 3697,1056.5 3697,981.97 3703.8,963.36 3717,890 3726.2,838.42 3737.2,827.08 3743,775 3744,766.17 3748.7,\ 761.84 3743,755 3730.6,740.05 3712.4,761.95 3700,747 3682.2,725.55 3706,523.9 3706,496 3706,496 3706,496 3706,336.5 3706,322.16 \ 3708.7,315.61 3699,305 3690.9,296.05 3665.2,287.66 3641.3,281.46"]; passdata -> Validate_Annotation_proc_annot_stats [_draw_="c 7 -#000000 B 40 2693.32 1212.18 2798.37 1210.33 2966.6 1207.39 3112 1205 3126.22 1204.77 3612.19 1204.93 3624 1197 3628.69 1193.85 \ 3664 1109.15 3664 1103.5 3664 1103.5 3664 1103.5 3664 831.5 3664 817.16 3665.34 811.66 3657 800 3644.58 782.64 3628.64 792.19 3616 \ 775 3608.4 764.67 3610.57 759.73 3609 747 3608.51 743.03 3607.25 741.6 3609 738 3620.37 714.66 3643.63 725.34 3655 702 3677.96 654.87 \ 3645.92 516.07 3625 468 3610.76 435.28 3574 441.68 3574 406 3574 406 3574 406 3574 314 3574 304.24 3578.29 294.31 3582.89 286.45 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3584.9 287.85 3586.63 280.63 3580.78 285.19 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3637 740.6 0 56 13 -univ_prot_xml ", label=univ_prot_xml, lp="3637,742.5", pos="e,3587.5,279.36 2693.3,1212.2 2798.4,1210.3 2966.6,1207.4 3112,1205 3126.2,1204.8 3612.2,1204.9 3624,1197 3628.7,1193.9 3664,1109.1 \ 3664,1103.5 3664,1103.5 3664,1103.5 3664,831.5 3664,817.16 3665.3,811.66 3657,800 3644.6,782.64 3628.6,792.19 3616,775 3608.4,764.67 \ 3610.6,759.73 3609,747 3608.5,743.03 3607.2,741.6 3609,738 3620.4,714.66 3643.6,725.34 3655,702 3678,654.87 3645.9,516.07 3625,468 \ 3610.8,435.28 3574,441.68 3574,406 3574,406 3574,406 3574,314 3574,304.24 3578.3,294.31 3582.9,286.45"]; passdata -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 28 2693.31 1212.53 2815.5 1210.41 3007.56 1205.73 3040 1197 3063.81 1190.59 3089 1195.65 3089 1171 3089 1171 3089 \ 1171 3089 944 3089 931.91 3087.95 927.89 3081 918 3065.66 896.19 3047.95 904.08 3033 882 3026.29 872.09 3026 867.97 3026 856 3026 \ 856 3026 856 3026 674 3026 659.95 3020.19 655 3008 648 3002.77 645 2986.81 642.44 2965.71 640.3 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2966.09 637.88 2958.89 639.64 2965.62 642.75 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3138 920.6 0 104 20 -naming_hmms_combined ", label=naming_hmms_combined, lp="3138,922.5", pos="e,2957.4,639.5 2693.3,1212.5 2815.5,1210.4 3007.6,1205.7 3040,1197 3063.8,1190.6 3089,1195.7 3089,1171 3089,1171 3089,1171 3089,\ 944 3089,931.91 3088,927.89 3081,918 3065.7,896.19 3048,904.08 3033,882 3026.3,872.09 3026,867.97 3026,856 3026,856 3026,856 3026,\ 674 3026,659.95 3020.2,655 3008,648 3002.8,645 2986.8,642.44 2965.7,640.3"]; passdata -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 25 2693.06 1214.7 2788.88 1214.32 2936.07 1211.08 3063 1197 3125.47 1190.07 3202 1233.85 3202 1171 3202 1171 3202 \ 1171 3202 944 3202 858.89 3054.94 892.69 3044 882 3035.44 873.64 3037 867.97 3037 856 3037 856 3037 856 3037 674 3037 659.69 3030.51 \ 654.95 3018 648 3012.54 644.97 2996.1 642.41 2974.35 640.27 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2974.82 637.85 2967.62 639.64 2974.36 642.73 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3227.5 920.6 0 57 13 -uniColl_cache ", label=uniColl_cache, lp="3227.5,922.5", pos="e,2966.1,639.5 2693.1,1214.7 2788.9,1214.3 2936.1,1211.1 3063,1197 3125.5,1190.1 3202,1233.8 3202,1171 3202,1171 3202,1171 3202,\ 944 3202,858.89 3054.9,892.69 3044,882 3035.4,873.64 3037,867.97 3037,856 3037,856 3037,856 3037,674 3037,659.69 3030.5,654.95 3018,\ 648 3012.5,644.97 2996.1,642.41 2974.4,640.27"]; passdata -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 37 2693.41 1213.28 2826.57 1211.91 3051.85 1208 3134 1197 3177.81 1191.13 3230 1215.2 3230 1171 3230 1171 3230 1171 \ 3230 966.5 3230 952.16 3227.71 945.93 3237 935 3243.2 927.71 3251.63 934.93 3257 927 3259.24 923.69 3259.31 921.26 3257 918 3235.2 \ 887.28 3213.91 897.52 3177 890 3163.69 887.29 3065.51 890.61 3055 882 3045.74 874.41 3048 867.97 3048 856 3048 856 3048 856 3048 \ 674 3048 659.42 3040.84 654.9 3028 648 3022.33 644.95 3005.46 642.39 2983.11 640.25 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2983.35 637.81 2976.15 639.61 2982.9 642.69 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3287 920.6 0 58 13 -naming_sqlite ", label=naming_sqlite, lp="3287,922.5", pos="e,2974.6,639.48 2693.4,1213.3 2826.6,1211.9 3051.9,1208 3134,1197 3177.8,1191.1 3230,1215.2 3230,1171 3230,1171 3230,1171 3230,966.5 \ 3230,952.16 3227.7,945.93 3237,935 3243.2,927.71 3251.6,934.93 3257,927 3259.2,923.69 3259.3,921.26 3257,918 3235.2,887.28 3213.9,\ 897.52 3177,890 3163.7,887.29 3065.5,890.61 3055,882 3045.7,874.41 3048,867.97 3048,856 3048,856 3048,856 3048,674 3048,659.42 3040.8,\ 654.9 3028,648 3022.3,644.95 3005.5,642.39 2983.1,640.25"]; passdata -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 22 2693.2 1211.26 2755.32 1208.87 2828.39 1204.56 2859 1197 2907.59 1185.01 2924.64 1176.24 2953 1135 2969.53 1110.97 \ 2970.82 1097.8 2962 1070 2934.43 983.12 2872.09 998.05 2815 927 2806.64 916.6 2800 914.34 2800 901 2800 901 2800 901 2800 674 2800 \ 664.89 2797.47 655.09 2794.74 647.14 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2797.1 646.47 2792.33 640.79 2792.52 648.2 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2846 920.6 0 62 14 -selenoproteins ", label=selenoproteins, lp="2846,922.5", pos="e,2791.8,639.37 2693.2,1211.3 2755.3,1208.9 2828.4,1204.6 2859,1197 2907.6,1185 2924.6,1176.2 2953,1135 2969.5,1111 2970.8,1097.8 \ 2962,1070 2934.4,983.12 2872.1,998.05 2815,927 2806.6,916.6 2800,914.34 2800,901 2800,901 2800,901 2800,674 2800,664.89 2797.5,655.09 \ 2794.7,647.14"]; passdata -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 28 2693.32 1214.28 2777.23 1212.6 2887.84 1205.37 2924 1180 2958.21 1156 2971.49 1139.76 2970 1098 2969.56 1085.53 \ 2970.86 1082.14 2968 1070 2966.13 1062.05 2964.16 1060.53 2961 1053 2955.76 1040.52 2955.35 1036.96 2949 1025 2924.72 979.27 2900.59 \ 976.68 2886 927 2871.19 876.57 2909 863.56 2909 811 2909 811 2909 811 2909 674 2909 659.42 2877.41 648.51 2846.51 641.33 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2847.11 638.95 2839.74 639.82 2846.04 643.74 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2909 920.6 0 46 9 -wp_hashes ", label=wp_hashes, lp="2909,922.5", pos="e,2838.3,639.5 2693.3,1214.3 2777.2,1212.6 2887.8,1205.4 2924,1180 2958.2,1156 2971.5,1139.8 2970,1098 2969.6,1085.5 2970.9,1082.1 \ 2968,1070 2966.1,1062 2964.2,1060.5 2961,1053 2955.8,1040.5 2955.3,1037 2949,1025 2924.7,979.27 2900.6,976.68 2886,927 2871.2,876.57 \ 2909,863.56 2909,811 2909,811 2909,811 2909,674 2909,659.42 2877.4,648.51 2846.5,641.33"]; passdata -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 16 2693.49 1212.81 2812 1210.04 2991 1200.9 2991 1171 2991 1171 2991 1171 2991 1101.5 2991 1009.21 2937 993.29 2937 \ 901 2937 901 2937 901 2937 674 2937 657.92 2904.57 647.49 2869.97 640.93 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2870.44 638.52 2863.12 639.69 2869.57 643.35 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2957 920.6 0 38 8 -taxon_db ", label=taxon_db, lp="2957,922.5", pos="e,2861.6,639.43 2693.5,1212.8 2812,1210 2991,1200.9 2991,1171 2991,1171 2991,1171 2991,1101.5 2991,1009.2 2937,993.29 2937,901 2937,\ 901 2937,901 2937,674 2937,657.92 2904.6,647.49 2870,640.93"]; passdata -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 16 2693.1 1213.2 2782.25 1211.77 2904.59 1207.82 2952 1197 2970.83 1192.7 2980.5 1195.52 2992 1180 3020.97 1140.91 \ 2984 992.76 2984 901 2984 901 2984 901 2984 674 2984 657.39 2956.81 647.19 2922.68 640.93 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2923.15 638.52 2915.84 639.75 2922.32 643.35 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3005.5 920.6 0 43 8 -hmms_tab ", label=hmms_tab, lp="3005.5,922.5", pos="e,2914.3,639.49 2693.1,1213.2 2782.3,1211.8 2904.6,1207.8 2952,1197 2970.8,1192.7 2980.5,1195.5 2992,1180 3021,1140.9 2984,992.76 \ 2984,901 2984,901 2984,901 2984,674 2984,657.39 2956.8,647.19 2922.7,640.93"]; passdata -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 16 2693.37 1214.04 2824.77 1212.7 3036 1205.22 3036 1171 3036 1171 3036 1171 3036 944 3036 936.14 2991.98 671.78 \ 2988 665 2981.93 654.64 2978.12 652.54 2967 648 2959.81 645.07 2948.66 642.63 2935.36 640.61 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2936.06 638.24 2928.79 639.68 2935.38 643.09 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3055 920.6 0 44 10 -thresholds ", label=thresholds, lp="3055,922.5", pos="e,2927.3,639.47 2693.4,1214 2824.8,1212.7 3036,1205.2 3036,1171 3036,1171 3036,1171 3036,944 3036,936.14 2992,671.78 2988,665 2981.9,\ 654.64 2978.1,652.54 2967,648 2959.8,645.07 2948.7,642.63 2935.4,640.61"]; passdata -> Cache_Entrez_Gene [_draw_="c 7 -#000000 B 34 2488.65 1213.62 2291.37 1212.63 1872.13 1209.1 1807 1197 1795.39 1194.84 1793.21 1191.72 1782 1188 1781.85 1187.95 \ 1608.13 1135.1 1608 1135 1577.82 1111.72 1573.39 1098.67 1563 1062 1561.91 1058.15 1561.36 1056.65 1563 1053 1565.19 1048.12 1569.81 \ 1049.88 1572 1045 1575.64 1036.89 1577.86 1031.68 1572 1025 1553.97 1004.45 1532.82 1033.47 1511 1017 1496.7 1006.21 1508.96 991.23 \ 1495 980 1480.54 968.36 1470.69 980.13 1454 972 1447.95 969.05 1442.15 964.57 1437.29 960.16 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1439.12 958.52 1432.4 955.38 1435.7 962.02 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1591 1078.1 0 40 9 -egene_ini ", label=egene_ini, lp="1591,1080", pos="e,1431.3,954.33 2488.6,1213.6 2291.4,1212.6 1872.1,1209.1 1807,1197 1795.4,1194.8 1793.2,1191.7 1782,1188 1781.9,1188 1608.1,1135.1 \ 1608,1135 1577.8,1111.7 1573.4,1098.7 1563,1062 1561.9,1058.2 1561.4,1056.6 1563,1053 1565.2,1048.1 1569.8,1049.9 1572,1045 1575.6,\ 1036.9 1577.9,1031.7 1572,1025 1554,1004.4 1532.8,1033.5 1511,1017 1496.7,1006.2 1509,991.23 1495,980 1480.5,968.36 1470.7,980.13 \ 1454,972 1448,969.05 1442.2,964.57 1437.3,960.16"]; passdata -> Cache_Entrez_Gene [_draw_="c 7 -#000000 B 28 2488.89 1213.69 2287.4 1212.81 1852.3 1209.48 1785 1197 1773.39 1194.85 1771.49 1190.73 1760 1188 1731.25 1181.17 \ 1722.58 1187.48 1694 1180 1634.76 1164.49 1476.75 1114.36 1445 1062 1442.93 1058.58 1442.79 1056.33 1445 1053 1450.07 1045.37 1458.93 \ 1052.63 1464 1045 1473.1 1031.3 1474.96 1020.26 1464 1008 1442.84 984.32 1414.16 1023.68 1393 1000 1382.2 987.92 1394.67 971.48 \ 1406.87 959.92 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1408.37 961.86 1411.97 955.38 1405.11 958.2 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1495 1078.1 0 44 9 -asn_cache ", label=asn_cache, lp="1495,1080", pos="e,1413.1,954.37 2488.9,1213.7 2287.4,1212.8 1852.3,1209.5 1785,1197 1773.4,1194.8 1771.5,1190.7 1760,1188 1731.3,1181.2 1722.6,1187.5 \ 1694,1180 1634.8,1164.5 1476.7,1114.4 1445,1062 1442.9,1058.6 1442.8,1056.3 1445,1053 1450.1,1045.4 1458.9,1052.6 1464,1045 1473.1,\ 1031.3 1475,1020.3 1464,1008 1442.8,984.32 1414.2,1023.7 1393,1000 1382.2,987.92 1394.7,971.48 1406.9,959.92"]; passdata -> bacterial_trna [_draw_="c 7 -#000000 B 31 2525.24 1205.5 2516.14 1203.25 2508.65 1200.45 2505 1197 2486.96 1179.99 2505.14 1163.37 2491 1143 2478.62 1125.17 \ 2471.03 1123.35 2451 1115 2441.2 1110.92 2367.55 1099.18 2357 1098 2316.55 1093.48 2213.5 1099.84 2174 1090 2153.94 1085 2151.59 \ 1076.62 2132 1070 2115.65 1064.47 2110.32 1067.63 2094 1062 2008.32 1032.43 1989.92 1016.58 1911 972 1904.56 968.36 1903.36 966.78 \ 1897 963 1894.42 961.47 1891.7 959.9 1888.98 958.37 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1890.52 956.42 1883.21 955.17 1888.15 960.71 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2193 1078.1 0 38 8 -taxon_db ", label=taxon_db, lp="2193,1080", pos="e,1881.9,954.44 2525.2,1205.5 2516.1,1203.2 2508.7,1200.4 2505,1197 2487,1180 2505.1,1163.4 2491,1143 2478.6,1125.2 2471,1123.3 \ 2451,1115 2441.2,1110.9 2367.5,1099.2 2357,1098 2316.5,1093.5 2213.5,1099.8 2174,1090 2153.9,1085 2151.6,1076.6 2132,1070 2115.6,\ 1064.5 2110.3,1067.6 2094,1062 2008.3,1032.4 1989.9,1016.6 1911,972 1904.6,968.36 1903.4,966.78 1897,963 1894.4,961.47 1891.7,959.9 \ 1889,958.37"]; passdata -> Get_Proteins [_draw_="c 7 -#000000 B 16 2488.64 1214.19 2343.95 1213.91 2086.99 1211.33 1995 1197 1968.04 1192.8 1952.41 1201.8 1936 1180 1930.66 1172.9 \ 1930.66 1167.1 1936 1160 1940.1 1154.55 1988.31 1144.35 1995 1143 2026.54 1136.61 2062.53 1132.34 2090.39 1129.67 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2090.51 1132.12 2097.26 1129.03 2090.06 1127.24 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1965 1168.1 0 58 13 -naming_sqlite ", label=naming_sqlite, lp="1965,1170", pos="e,2098.8,1128.9 2488.6,1214.2 2344,1213.9 2087,1211.3 1995,1197 1968,1192.8 1952.4,1201.8 1936,1180 1930.7,1172.9 1930.7,1167.1 \ 1936,1160 1940.1,1154.5 1988.3,1144.4 1995,1143 2026.5,1136.6 2062.5,1132.3 2090.4,1129.7"]; passdata -> Get_Proteins [_draw_="c 7 -#000000 B 10 2488.56 1214.62 2355.39 1214.77 2130.25 1212.56 2049 1197 2027.18 1192.82 2014.76 1198.18 2002 1180 1977.86 1145.59 \ 2042.23 1133.1 2090.19 1128.57 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2090.35 1131.01 2097.12 1127.97 2089.93 1126.13 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2025 1168.1 0 46 12 -tax_sql_file ", label=tax_sql_file, lp="2025,1170", pos="e,2098.6,1127.8 2488.6,1214.6 2355.4,1214.8 2130.3,1212.6 2049,1197 2027.2,1192.8 2014.8,1198.2 2002,1180 1977.9,1145.6 2042.2,1133.1 \ 2090.2,1128.6"]; passdata -> Get_Proteins [_draw_="c 7 -#000000 B 10 2488.59 1212.35 2375.04 1210.13 2199.15 1205.46 2133 1197 2098.24 1192.55 2077.95 1207.32 2056 1180 2040.73 1160.99 \ 2068.39 1146.26 2095.45 1137.02 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2096.06 1139.4 2101.96 1134.91 2094.55 1134.74 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2094 1168.1 0 76 17 -uniColl_asn_cache ", label=uniColl_asn_cache, lp="2094,1170", pos="e,2103.4,1134.4 2488.6,1212.3 2375,1210.1 2199.1,1205.5 2133,1197 2098.2,1192.6 2077.9,1207.3 2056,1180 2040.7,1161 2068.4,1146.3 \ 2095.4,1137"]; passdata -> Get_Proteins [_draw_="c 7 -#000000 B 7 2488.59 1213.38 2362.67 1211.55 2162.63 1204.73 2139 1180 2129.7 1170.27 2130.2 1154.49 2132.43 1142.5 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2134.81 1143.07 2134 1135.7 2130.04 1141.97 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2162 1168.1 0 46 11 -blastdb_dir ", label=blastdb_dir, lp="2162,1170", pos="e,2134.3,1134.2 2488.6,1213.4 2362.7,1211.6 2162.6,1204.7 2139,1180 2129.7,1170.3 2130.2,1154.5 2132.4,1142.5"]; passdata -> genomic_source [_draw_="c 7 -#000000 B 10 2488.55 1213.33 2288.59 1211.81 1852.79 1207.39 1703 1197 1669.51 1194.68 1661.47 1190.62 1628 1188 1529.63 1180.31 \ 1419.23 1176.08 1330.91 1173.77 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1331 1171.32 1323.94 1173.59 1330.88 1176.22 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1722 1190.6 0 38 8 -taxon_db ", label=taxon_db, lp="1722,1192.5", pos="e,1322.4,1173.6 2488.5,1213.3 2288.6,1211.8 1852.8,1207.4 1703,1197 1669.5,1194.7 1661.5,1190.6 1628,1188 1529.6,1180.3 1419.2,1176.1 \ 1330.9,1173.8"]; passdata -> Get_Order_Specific_Strings [_draw_="c 7 -#000000 B 7 2488.66 1206.81 2459.61 1204.26 2428.01 1201.01 2399 1197 2368.82 1192.83 2335.22 1186.54 2308.73 1181.18 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2309.22 1178.78 2301.87 1179.79 2308.24 1183.59 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2410 1190.6 0 22 5 -input ", label=input, lp="2410,1192.5", pos="e,2300.4,1179.5 2488.7,1206.8 2459.6,1204.3 2428,1201 2399,1197 2368.8,1192.8 2335.2,1186.5 2308.7,1181.2"]; passdata -> bacterial_orthology_conditional [_draw_="c 7 -#000000 B 43 2488.87 1213.85 2234.62 1213.27 1590.53 1210.47 1546 1197 1538.92 1194.86 1539.08 1190.13 1532 1188 1500.61 1178.55 \ 970.97 1195.34 942 1180 932.41 1174.92 937.04 1166.01 928 1160 913.99 1150.69 901.95 1164.78 891 1152 889.11 1149.79 889.96 1115.21 \ 890 1115 890.69 1111.67 985.55 893.08 987 890 991.78 879.84 1024.58 807.44 1033 800 1040.8 793.11 1046.5 798.01 1055 792 1081.98 \ 772.93 1077 754.04 1077 721 1077 721 1077 721 1077 651.5 1077 621.98 1088 615.52 1088 586 1088 586 1088 586 1088 494 1088 481.33 \ 1097.45 471.17 1107.59 463.91 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1108.8 466.05 1113.34 460.18 1106.13 461.93 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1038 830.6 0 44 9 -asn_cache ", label=asn_cache, lp="1038,832.5", pos="e,1114.6,459.36 2488.9,1213.8 2234.6,1213.3 1590.5,1210.5 1546,1197 1538.9,1194.9 1539.1,1190.1 1532,1188 1500.6,1178.5 970.97,1195.3 \ 942,1180 932.41,1174.9 937.04,1166 928,1160 913.99,1150.7 901.95,1164.8 891,1152 889.11,1149.8 889.96,1115.2 890,1115 890.69,1111.7 \ 985.55,893.08 987,890 991.78,879.84 1024.6,807.44 1033,800 1040.8,793.11 1046.5,798.01 1055,792 1082,772.93 1077,754.04 1077,721 \ 1077,721 1077,721 1077,651.5 1077,621.98 1088,615.52 1088,586 1088,586 1088,586 1088,494 1088,481.33 1097.4,471.17 1107.6,463.91"]; passdata -> bacterial_orthology_conditional [_draw_="c 7 -#000000 B 34 2693.16 1212.24 2927.27 1208.18 3483.22 1198.42 3493 1197 3535.9 1190.76 3587 1214.35 3587 1171 3587 1171 3587 \ 1171 3587 1101.5 3587 1076.07 3592.99 1070.25 3596 1045 3605.08 968.88 3640.19 943.03 3609 873 3599.27 851.15 3586.45 853.36 3569 \ 837 3530.94 801.32 3522.77 790.99 3485 755 3459.95 731.14 3443.86 732.74 3428 702 3407.66 662.56 3424.9 646.26 3415 603 3402.68 \ 549.16 3420.13 518.21 3376 485 3331.84 451.77 1602.36 450.74 1210.42 450.93 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1210.48 448.48 1203.48 450.93 1210.48 453.38 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3598 830.6 0 58 13 -naming_sqlite ", label=naming_sqlite, lp="3598,832.5", pos="e,1202,450.93 2693.2,1212.2 2927.3,1208.2 3483.2,1198.4 3493,1197 3535.9,1190.8 3587,1214.3 3587,1171 3587,1171 3587,1171 3587,1101.5 \ 3587,1076.1 3593,1070.2 3596,1045 3605.1,968.88 3640.2,943.03 3609,873 3599.3,851.15 3586.4,853.36 3569,837 3530.9,801.32 3522.8,\ 790.99 3485,755 3460,731.14 3443.9,732.74 3428,702 3407.7,662.56 3424.9,646.26 3415,603 3402.7,549.16 3420.1,518.21 3376,485 3331.8,\ 451.77 1602.4,450.74 1210.4,450.93"]; passdata -> bacterial_orthology_conditional [_draw_="c 7 -#000000 B 37 2488.68 1214.44 2298.55 1214.79 1877.94 1213.42 1524 1197 1471.9 1194.58 1459.1 1190.43 1407 1188 1352.94 1185.48 \ 972.52 1193.06 920 1180 884.54 1171.18 858 1162.54 858 1126 858 1126 858 1126 858 1056.5 858 997.04 784.88 991.94 802 935 818.58 \ 879.87 832.31 866.62 875 828 910.28 796.09 934.91 809.18 968 775 974.29 768.5 1044 640.05 1044 631 1044 631 1044 631 1044 561.5 \ 1044 517.99 1038.62 494.67 1073 468 1075.42 466.13 1078.03 464.46 1080.77 462.97 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1081.6 465.29 1086.89 460.1 1079.52 460.86 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 894 830.6 0 38 8 -taxon_db ", label=taxon_db, lp="894,832.5", pos="e,1088.3,459.46 2488.7,1214.4 2298.6,1214.8 1877.9,1213.4 1524,1197 1471.9,1194.6 1459.1,1190.4 1407,1188 1352.9,1185.5 972.52,1193.1 \ 920,1180 884.54,1171.2 858,1162.5 858,1126 858,1126 858,1126 858,1056.5 858,997.04 784.88,991.94 802,935 818.58,879.87 832.31,866.62 \ 875,828 910.28,796.09 934.91,809.18 968,775 974.29,768.5 1044,640.05 1044,631 1044,631 1044,631 1044,561.5 1044,517.99 1038.6,494.67 \ 1073,468 1075.4,466.13 1078,464.46 1080.8,462.97"]; passdata -> bacterial_orthology_conditional [_draw_="c 7 -#000000 B 40 2488.61 1213.91 2260.87 1213.46 1718.06 1210.9 1535 1197 1505.48 1194.76 1498.52 1190.22 1469 1188 1439.19 1185.75 \ 959.59 1188.72 931 1180 928.27 1179.17 890.07 1153.96 888 1152 877.61 1142.16 869 1140.31 869 1126 869 1126 869 1126 869 1056.5 \ 869 1028.65 953.46 848.78 972 828 993.21 804.22 1006.89 808.74 1034 792 1045.12 785.13 1050.6 785.78 1058 775 1066.18 763.09 1066 \ 757.94 1066 743.5 1066 743.5 1066 743.5 1066 539 1066 505.24 1068.24 490.95 1093 468 1094.78 466.35 1096.74 464.85 1098.81 463.48 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1099.96 465.64 1104.84 460.06 1097.54 461.38 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 991.5 830.6 0 39 8 -gc_cache ", label=gc_cache, lp="991.5,832.5", pos="e,1106.2,459.32 2488.6,1213.9 2260.9,1213.5 1718.1,1210.9 1535,1197 1505.5,1194.8 1498.5,1190.2 1469,1188 1439.2,1185.8 959.59,1188.7 \ 931,1180 928.27,1179.2 890.07,1154 888,1152 877.61,1142.2 869,1140.3 869,1126 869,1126 869,1126 869,1056.5 869,1028.7 953.46,848.78 \ 972,828 993.21,804.22 1006.9,808.74 1034,792 1045.1,785.13 1050.6,785.78 1058,775 1066.2,763.09 1066,757.94 1066,743.5 1066,743.5 \ 1066,743.5 1066,539 1066,505.24 1068.2,490.95 1093,468 1094.8,466.35 1096.7,464.85 1098.8,463.48"]; passdata -> ab_initio_antifam [_draw_="c 7 -#000000 B 34 2518.41 1205.58 2508.85 1203.33 2500.98 1200.51 2497 1197 2478.12 1180.36 2497.85 1160.73 2480 1143 2471.42 1134.48 \ 2465.43 1138.93 2454 1135 2410.37 1119.98 2402.2 1107.25 2357 1098 2334.89 1093.47 2173.81 1100.82 2154 1090 2136.36 1080.37 2144.79 \ 1064.04 2128 1053 2113.58 1043.52 2102.73 1056.65 2090 1045 2061.89 1019.28 2094.02 987.69 2065 963 2054.92 954.43 2018.7 958.71 \ 2006 955 1968.39 944.02 1962.12 933.16 1926 918 1880.59 898.94 1827.07 879.21 1793.83 867.27 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1794.68 864.97 1787.26 864.91 1793.03 869.58 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2112.5 1033.1 0 45 10 -AntiFamLib ", label=AntiFamLib, lp="2112.5,1035", pos="e,1785.8,864.4 2518.4,1205.6 2508.8,1203.3 2501,1200.5 2497,1197 2478.1,1180.4 2497.8,1160.7 2480,1143 2471.4,1134.5 2465.4,1138.9 \ 2454,1135 2410.4,1120 2402.2,1107.3 2357,1098 2334.9,1093.5 2173.8,1100.8 2154,1090 2136.4,1080.4 2144.8,1064 2128,1053 2113.6,1043.5 \ 2102.7,1056.7 2090,1045 2061.9,1019.3 2094,987.69 2065,963 2054.9,954.43 2018.7,958.71 2006,955 1968.4,944.02 1962.1,933.16 1926,\ 918 1880.6,898.94 1827.1,879.21 1793.8,867.27"]; passdata -> spurious_annot_prelim [_draw_="c 7 -#000000 B 49 2488.72 1213.35 2296.21 1211.89 1898.33 1207.59 1888 1197 1852.34 1160.46 1937.3 1113.71 1940 1107 1941.5 1103.29 \ 1942.32 1101.26 1940 1098 1933.73 1089.18 1925.86 1096.22 1917 1090 1899.67 1077.84 1904.72 1064.59 1887 1053 1875.81 1045.68 1870.55 \ 1049.62 1858 1045 1830.39 1034.83 1823.77 1031.21 1798 1017 1791.52 1013.43 1791.06 1010.21 1784 1008 1772.44 1004.37 1574.41 1008.73 \ 1566 1000 1559.83 993.6 1565.61 988.88 1566 980 1566.17 976.24 1575.5 847.82 1578 845 1602.11 817.79 1621.96 832.71 1658 828 1693.08 \ 823.42 1783.54 831.48 1817 820 1837.53 812.96 1846.98 811.25 1857 792 1858.85 788.45 1859.65 785.99 1857 783 1855.5 781.31 1809.25 \ 775.92 1770.31 771.66 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1770.87 769.26 1763.64 770.93 1770.33 774.13 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1588.5 988.1 0 45 10 -AntiFamLib ", label=AntiFamLib, lp="1588.5,990", pos="e,1762.1,770.77 2488.7,1213.4 2296.2,1211.9 1898.3,1207.6 1888,1197 1852.3,1160.5 1937.3,1113.7 1940,1107 1941.5,1103.3 1942.3,1101.3 \ 1940,1098 1933.7,1089.2 1925.9,1096.2 1917,1090 1899.7,1077.8 1904.7,1064.6 1887,1053 1875.8,1045.7 1870.5,1049.6 1858,1045 1830.4,\ 1034.8 1823.8,1031.2 1798,1017 1791.5,1013.4 1791.1,1010.2 1784,1008 1772.4,1004.4 1574.4,1008.7 1566,1000 1559.8,993.6 1565.6,988.88 \ 1566,980 1566.2,976.24 1575.5,847.82 1578,845 1602.1,817.79 1622,832.71 1658,828 1693.1,823.42 1783.5,831.48 1817,820 1837.5,812.96 \ 1847,811.25 1857,792 1858.8,788.45 1859.7,785.99 1857,783 1855.5,781.31 1809.3,775.92 1770.3,771.66"]; passdata -> spurious_annot_final [_draw_="c 7 -#000000 B 37 2693.37 1214.73 2837.31 1215.14 3092.12 1213.37 3183 1197 3210.8 1191.99 3241 1199.25 3241 1171 3241 1171 3241 \ 1171 3241 966.5 3241 952.16 3237.35 944.6 3248 935 3259.46 924.66 3306.73 938.53 3317 927 3319.66 924.01 3319.42 921.19 3317 918 \ 3316.78 917.71 3217.36 890.06 3217 890 3200.42 887.27 3077.62 894.14 3066 882 3056.24 871.81 3056 765.87 3065 755 3077.11 740.36 \ 3094.89 761.64 3107 747 3110.38 742.92 3150.69 653.96 3101 603 3088.95 590.64 2993.73 587.12 2925.88 586.2 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2926.29 583.76 2919.26 586.12 2926.23 588.66 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3310.5 898.1 0 45 10 -AntiFamLib ", label=AntiFamLib, lp="3310.5,900", pos="e,2917.7,586.1 2693.4,1214.7 2837.3,1215.1 3092.1,1213.4 3183,1197 3210.8,1192 3241,1199.2 3241,1171 3241,1171 3241,1171 3241,966.5 \ 3241,952.16 3237.3,944.6 3248,935 3259.5,924.66 3306.7,938.53 3317,927 3319.7,924.01 3319.4,921.19 3317,918 3316.8,917.71 3217.4,\ 890.06 3217,890 3200.4,887.27 3077.6,894.14 3066,882 3056.2,871.81 3056,765.87 3065,755 3077.1,740.36 3094.9,761.64 3107,747 3110.4,\ 742.92 3150.7,653.96 3101,603 3088.9,590.64 2993.7,587.12 2925.9,586.2"]; passdata -> Validate_Annotation_xsltproc_asnvalidate [_draw_="c 7 -#000000 B 31 2693.12 1214.2 2954.14 1214.46 3628.46 1213.53 3674 1197 3722.34 1179.46 3707.91 1140.42 3718 1090 3750.65 926.79 \ 3782 887.45 3782 721 3782 721 3782 721 3782 629 3782 549.64 3768 530.36 3768 451 3768 451 3768 451 3768 201.5 3768 187.16 3771.53 \ 179.73 3761 170 3742.21 152.64 3723.98 177.97 3704 162 3690.27 151.02 3696.24 141.44 3690 125 3686.78 116.52 3683.19 107.08 3680.22 \ 99.3 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3682.52 98.45 3677.73 92.78 3677.94 100.19 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3789.5 650.6 0 15 4 -xslt ", label=xslt, lp="3789.5,652.5", pos="e,3677.2,91.365 2693.1,1214.2 2954.1,1214.5 3628.5,1213.5 3674,1197 3722.3,1179.5 3707.9,1140.4 3718,1090 3750.7,926.79 3782,887.45 \ 3782,721 3782,721 3782,721 3782,629 3782,549.64 3768,530.36 3768,451 3768,451 3768,451 3768,201.5 3768,187.16 3771.5,179.73 3761,\ 170 3742.2,152.64 3724,177.97 3704,162 3690.3,151.02 3696.2,141.44 3690,125 3686.8,116.52 3683.2,107.08 3680.2,99.302"]; passdata -> Prepare_Unannotated_Sequences_pgapx_input_check [_draw_="c 7 -#000000 B 25 2503.48 1205.58 2494.35 1203.36 2486.96 1200.55 2483 1197 2470.32 1185.62 2484.96 1172.13 2473 1160 2463.91 1150.78 \ 2456.59 1157.76 2445 1152 2439.03 1149.03 2438.68 1146.49 2433 1143 2402.18 1124.07 2391.49 1124.81 2360 1107 2353.56 1103.36 2353.05 \ 1100.22 2346 1098 2302.94 1084.43 2187.98 1093.85 2143 1090 2141.4 1089.86 2139.78 1089.71 2138.14 1089.56 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2138.6 1087.14 2131.39 1088.86 2138.1 1092.02 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2464 1145.6 0 38 8 -taxon_db ", label=taxon_db, lp="2464,1147.5", pos="e,2129.9,1088.7 2503.5,1205.6 2494.3,1203.4 2487,1200.6 2483,1197 2470.3,1185.6 2485,1172.1 2473,1160 2463.9,1150.8 2456.6,1157.8 \ 2445,1152 2439,1149 2438.7,1146.5 2433,1143 2402.2,1124.1 2391.5,1124.8 2360,1107 2353.6,1103.4 2353.1,1100.2 2346,1098 2302.9,1084.4 \ 2188,1093.9 2143,1090 2141.4,1089.9 2139.8,1089.7 2138.1,1089.6"]; passdata -> Prepare_Unannotated_Sequences_pgapx_input_check [_draw_="c 7 -#000000 B 16 2497.56 1205.55 2488.03 1203.33 2480.28 1200.53 2476 1197 2462.56 1185.91 2476.88 1170.54 2463 1160 2452.27 1151.85 \ 2355.19 1154.75 2342 1152 2330.44 1149.59 2328.29 1146.47 2317 1143 2249.4 1122.22 2169.73 1102.76 2120.79 1091.37 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2121.46 1089.01 2114.09 1089.81 2120.36 1093.78 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2387 1145.6 0 90 19 -species_genome_size ", label=species_genome_size, lp="2387,1147.5", pos="e,2112.6,1089.5 2497.6,1205.5 2488,1203.3 2480.3,1200.5 2476,1197 2462.6,1185.9 2476.9,1170.5 2463,1160 2452.3,1151.9 2355.2,1154.8 \ 2342,1152 2330.4,1149.6 2328.3,1146.5 2317,1143 2249.4,1122.2 2169.7,1102.8 2120.8,1091.4"]; passdata -> Validate_Annotation_bact_univ_prot_stats [_draw_="c 7 -#000000 B 40 2693.32 1212.17 2798.37 1210.31 2966.6 1207.37 3112 1205 3126.53 1204.76 3623.01 1205.21 3635 1197 3649.64 1186.97 \ 3641.34 1175.49 3650 1160 3659.15 1143.63 3675 1144.76 3675 1126 3675 1126 3675 1126 3675 831.5 3675 817.16 3674.29 812.89 3668 \ 800 3663.71 791.2 3662.27 788.23 3654 783 3641.61 775.17 3631.02 786.56 3622 775 3616.53 767.99 3616.3 761.82 3622 755 3634.74 739.74 \ 3651.37 760.46 3666 747 3674.81 738.9 3673 732.97 3673 721 3673 721 3673 721 3673 359 3673 347.6 3665.61 337.36 3657.83 329.74 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3659.89 328.3 3653.04 325.45 3656.62 331.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3655.5 763.1 0 67 15 -val_res_den_xml ", label=val_res_den_xml, lp="3655.5,765", pos="e,3651.9,324.44 2693.3,1212.2 2798.4,1210.3 2966.6,1207.4 3112,1205 3126.5,1204.8 3623,1205.2 3635,1197 3649.6,1187 3641.3,1175.5 \ 3650,1160 3659.1,1143.6 3675,1144.8 3675,1126 3675,1126 3675,1126 3675,831.5 3675,817.16 3674.3,812.89 3668,800 3663.7,791.2 3662.3,\ 788.23 3654,783 3641.6,775.17 3631,786.56 3622,775 3616.5,767.99 3616.3,761.82 3622,755 3634.7,739.74 3651.4,760.46 3666,747 3674.8,\ 738.9 3673,732.97 3673,721 3673,721 3673,721 3673,359 3673,347.6 3665.6,337.36 3657.8,329.74"]; passdata -> Validate_Annotation_bact_univ_prot_stats [_draw_="c 7 -#000000 B 34 2693.32 1212.17 2798.37 1210.3 2966.6 1207.35 3112 1205 3126.72 1204.76 3629.49 1204.77 3642 1197 3657.7 1187.25 \ 3651.27 1175.72 3661 1160 3670.87 1144.05 3686 1144.76 3686 1126 3686 1126 3686 1126 3686 1034 3686 910 3689.64 878.95 3686 755 \ 3685.56 739.87 3684 736.14 3684 721 3684 721 3684 721 3684 539 3684 499.58 3695 490.42 3695 451 3695 451 3695 451 3695 359 3695 \ 345.25 3684.2 335.24 3672.17 328.36 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3673.3 326.18 3665.95 325.16 3671.06 330.54 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3714 763.1 0 56 13 -univ_prot_xml ", label=univ_prot_xml, lp="3714,765", pos="e,3664.6,324.47 2693.3,1212.2 2798.4,1210.3 2966.6,1207.4 3112,1205 3126.7,1204.8 3629.5,1204.8 3642,1197 3657.7,1187.2 3651.3,1175.7 \ 3661,1160 3670.9,1144.1 3686,1144.8 3686,1126 3686,1126 3686,1126 3686,1034 3686,910 3689.6,878.95 3686,755 3685.6,739.87 3684,736.14 \ 3684,721 3684,721 3684,721 3684,539 3684,499.58 3695,490.42 3695,451 3695,451 3695,451 3695,359 3695,345.25 3684.2,335.24 3672.2,\ 328.36"]; passdata -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 28 2693.26 1212.16 2904.08 1208.32 3367.71 1199.58 3371 1197 3380.42 1189.62 3378 1182.97 3378 1171 3378 1171 3378 \ 1171 3378 944 3378 919.67 3387.02 906.35 3369 890 3349.7 872.49 3271.19 899.63 3252 882 3243.39 874.09 3248 867.69 3248 856 3248 \ 856 3248 856 3248 584 3248 553.71 3214.55 564.66 3185 558 3160.97 552.58 3115.72 548.89 3066.39 546.36 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3066.74 543.93 3059.62 546.03 3066.49 548.82 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3270.5 875.6 0 37 7 -CDDdata ", label=CDDdata, lp="3270.5,877.5", pos="e,3058.1,545.95 2693.3,1212.2 2904.1,1208.3 3367.7,1199.6 3371,1197 3380.4,1189.6 3378,1183 3378,1171 3378,1171 3378,1171 3378,944 \ 3378,919.67 3387,906.35 3369,890 3349.7,872.49 3271.2,899.63 3252,882 3243.4,874.09 3248,867.69 3248,856 3248,856 3248,856 3248,\ 584 3248,553.71 3214.5,564.66 3185,558 3161,552.58 3115.7,548.89 3066.4,546.36"]; passdata -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 37 2693.4 1212.16 2908.01 1208.26 3386.65 1199.34 3404 1197 3450.79 1190.69 3507 1218.21 3507 1171 3507 1171 3507 \ 1171 3507 989 3507 957.39 3528.45 944.35 3511 918 3488.34 883.8 3461.56 902.46 3426 882 3420.22 878.68 3419.54 876.7 3414 873 3381.36 \ 851.19 3374.62 842.14 3338 828 3321.49 821.63 3311.61 832.41 3299 820 3288.78 809.94 3292 802.84 3292 788.5 3292 788.5 3292 788.5 \ 3292 584 3292 569.95 3286.31 564.78 3274 558 3254.83 547.45 3160.71 543.08 3066.84 541.4 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3066.9 538.95 3059.86 541.28 3066.82 543.85 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3467.5 875.6 0 83 21 -identification_db_dir ", label=identification_db_dir, lp="3467.5,877.5", pos="e,3058.3,541.25 2693.4,1212.2 2908,1208.3 3386.7,1199.3 3404,1197 3450.8,1190.7 3507,1218.2 3507,1171 3507,1171 3507,1171 3507,989 \ 3507,957.39 3528.5,944.35 3511,918 3488.3,883.8 3461.6,902.46 3426,882 3420.2,878.68 3419.5,876.7 3414,873 3381.4,851.19 3374.6,\ 842.14 3338,828 3321.5,821.63 3311.6,832.41 3299,820 3288.8,809.94 3292,802.84 3292,788.5 3292,788.5 3292,788.5 3292,584 3292,569.95 \ 3286.3,564.78 3274,558 3254.8,547.45 3160.7,543.08 3066.8,541.4"]; passdata -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 31 2693.26 1212.3 2898.53 1208.81 3341.88 1200.83 3349 1197 3361.38 1190.34 3367 1185.05 3367 1171 3367 1171 3367 \ 1171 3367 944 3367 919.51 3374.66 905.87 3356 890 3338.97 875.52 3170.49 898.12 3155 882 3152.23 879.12 3154.52 876.97 3155 873 \ 3160.82 824.41 3181 814.94 3181 766 3181 766 3181 766 3181 584 3181 571.27 3179.53 565.15 3169 558 3158.86 551.11 3116.86 546.97 \ 3066.86 544.5 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3067.06 542.05 3059.95 544.17 3066.82 546.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3200 875.6 0 90 21 -defline_cleanup_rules ", label=defline_cleanup_rules, lp="3200,877.5", pos="e,3058.4,544.1 2693.3,1212.3 2898.5,1208.8 3341.9,1200.8 3349,1197 3361.4,1190.3 3367,1185.1 3367,1171 3367,1171 3367,1171 3367,\ 944 3367,919.51 3374.7,905.87 3356,890 3339,875.52 3170.5,898.12 3155,882 3152.2,879.12 3154.5,876.97 3155,873 3160.8,824.41 3181,\ 814.94 3181,766 3181,766 3181,766 3181,584 3181,571.27 3179.5,565.15 3169,558 3158.9,551.11 3116.9,546.97 3066.9,544.5"]; passdata -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 28 2693.35 1212.14 2905.63 1208.25 3374.5 1199.37 3378 1197 3388.38 1189.96 3389 1183.55 3389 1171 3389 1171 3389 \ 1171 3389 944 3389 919.51 3396.17 906.42 3378 890 3364.74 878.02 3311.98 893.12 3298 882 3275.23 863.89 3283.18 848.43 3277 820 \ 3271.19 793.26 3267.8 597.34 3252 575 3241.78 560.55 3233.17 562.28 3216 558 3186.68 550.69 3128.06 546.48 3066.61 544.07 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3066.91 541.63 3059.83 543.81 3066.73 546.53 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3319 875.6 0 42 8 -CDDdata2 ", label=CDDdata2, lp="3319,877.5", pos="e,3058.3,543.76 2693.3,1212.1 2905.6,1208.2 3374.5,1199.4 3378,1197 3388.4,1190 3389,1183.5 3389,1171 3389,1171 3389,1171 3389,944 \ 3389,919.51 3396.2,906.42 3378,890 3364.7,878.02 3312,893.12 3298,882 3275.2,863.89 3283.2,848.43 3277,820 3271.2,793.26 3267.8,\ 597.34 3252,575 3241.8,560.55 3233.2,562.28 3216,558 3186.7,550.69 3128.1,546.48 3066.6,544.07"]; 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passdata -> log_package_versions [_draw_="c 7 -#000000 B 7 2488.82 1209.52 2471.85 1206.81 2454.68 1202.83 2439 1197 2431.08 1194.06 2423.21 1189.11 2416.72 1184.31 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2418.48 1182.58 2411.45 1180.2 2415.46 1186.44 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2450 1190.6 0 22 5 -input ", label=input, lp="2450,1192.5", pos="e,2410.3,1179.3 2488.8,1209.5 2471.9,1206.8 2454.7,1202.8 2439,1197 2431.1,1194.1 2423.2,1189.1 2416.7,1184.3"]; passdata -> bacterial_noncoding [_draw_="c 7 -#000000 B 19 2585.93 1205.57 2584.5 1202.9 2583.04 1199.89 2582 1197 2569.39 1161.98 2591.18 1141.45 2565 1115 2552.52 1102.39 \ 2504.58 1100.38 2487 1098 2470.79 1095.81 2351.25 1101.88 2340 1090 2305.07 1053.12 2375.17 1076.01 2387 1062 2411.08 1033.48 2393.78 \ 985.95 2382.18 961.53 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2384.52 960.73 2379.21 955.55 2380.13 962.91 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2378.5 1078.1 0 77 15 -rfam_amendments ", label=rfam_amendments, lp="2378.5,1080", pos="e,2378.5,954.2 2585.9,1205.6 2584.5,1202.9 2583,1199.9 2582,1197 2569.4,1162 2591.2,1141.5 2565,1115 2552.5,1102.4 2504.6,1100.4 \ 2487,1098 2470.8,1095.8 2351.2,1101.9 2340,1090 2305.1,1053.1 2375.2,1076 2387,1062 2411.1,1033.5 2393.8,985.95 2382.2,961.53"]; passdata -> bacterial_noncoding [_draw_="c 7 -#000000 B 19 2590.75 1205.7 2589.94 1184.4 2586.73 1128.56 2575 1115 2558.54 1095.97 2545.67 1102.97 2521 1098 2502.18 1094.21 \ 2450.15 1101.79 2435 1090 2394.07 1058.14 2415.73 1027.97 2396 980 2392.82 972.28 2392.47 970.06 2388 963 2387.59 962.35 2387.16 \ 961.7 2386.71 961.05 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2388.68 959.6 2382.48 955.53 2384.79 962.58 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2467.5 1078.1 0 65 14 -rfam_stockholm ", label=rfam_stockholm, lp="2467.5,1080", pos="e,2381.6,954.33 2590.7,1205.7 2589.9,1184.4 2586.7,1128.6 2575,1115 2558.5,1096 2545.7,1103 2521,1098 2502.2,1094.2 2450.1,1101.8 \ 2435,1090 2394.1,1058.1 2415.7,1028 2396,980 2392.8,972.28 2392.5,970.06 2388,963 2387.6,962.35 2387.2,961.7 2386.7,961.05"]; passdata -> bacterial_noncoding [_draw_="c 7 -#000000 B 19 2593.09 1205.74 2597.26 1187.25 2604.43 1142.02 2583 1115 2572.01 1101.13 2563.79 1103.6 2547 1098 2530.21 1092.4 \ 2519.82 1103.17 2508 1090 2498.6 1079.54 2505 1072.56 2505 1058.5 2505 1058.5 2505 1058.5 2505 989 2505 973.77 2472.65 963.06 2440.1 \ 956.14 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2440.67 953.75 2433.32 954.76 2439.69 958.56 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2541.5 1078.1 0 67 14 -model_path_16s ", label=model_path_16s, lp="2541.5,1080", pos="e,2431.8,954.46 2593.1,1205.7 2597.3,1187.2 2604.4,1142 2583,1115 2572,1101.1 2563.8,1103.6 2547,1098 2530.2,1092.4 2519.8,1103.2 \ 2508,1090 2498.6,1079.5 2505,1072.6 2505,1058.5 2505,1058.5 2505,1058.5 2505,989 2505,973.77 2472.6,963.06 2440.1,956.14"]; passdata -> bacterial_noncoding [_draw_="c 7 -#000000 B 25 2595.63 1205.56 2596.91 1202.89 2598.18 1199.89 2599 1197 2601.09 1189.69 2600.55 1187.59 2601 1180 2601.96 1163.58 \ 2602.76 1159.22 2600 1143 2597.83 1130.24 2595.97 1127.32 2592 1115 2588.38 1103.76 2585.58 1101.52 2583 1090 2579.93 1076.28 2580 \ 1072.56 2580 1058.5 2580 1058.5 2580 1058.5 2580 989 2580 962.93 2515.96 952.56 2459.3 948.49 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2459.66 946.06 2452.51 948.04 2459.33 950.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2602 1078.1 0 38 8 -taxon_db ", label=taxon_db, lp="2602,1080", pos="e,2451,947.94 2595.6,1205.6 2596.9,1202.9 2598.2,1199.9 2599,1197 2601.1,1189.7 2600.6,1187.6 2601,1180 2602,1163.6 2602.8,1159.2 \ 2600,1143 2597.8,1130.2 2596,1127.3 2592,1115 2588.4,1103.8 2585.6,1101.5 2583,1090 2579.9,1076.3 2580,1072.6 2580,1058.5 2580,1058.5 \ 2580,1058.5 2580,989 2580,962.93 2516,952.56 2459.3,948.49"]; passdata -> bacterial_noncoding [_draw_="c 7 -#000000 B 13 2603.64 1205.72 2613.66 1198.05 2626 1185.63 2626 1171 2626 1171 2626 1171 2626 989 2626 957.89 2591.25 970.26 \ 2561 963 2528.12 955.11 2491.2 950.82 2458.89 948.51 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2459.44 946.09 2452.3 948.07 2459.11 950.98 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2659.5 1078.1 0 67 14 -model_path_23s ", label=model_path_23s, lp="2659.5,1080", pos="e,2450.8,947.97 2603.6,1205.7 2613.7,1198 2626,1185.6 2626,1171 2626,1171 2626,1171 2626,989 2626,957.89 2591.3,970.26 2561,963 \ 2528.1,955.11 2491.2,950.82 2458.9,948.51"]; passdata -> bacterial_noncoding [_draw_="c 7 -#000000 B 25 2583.71 1205.77 2581.64 1203.11 2579.53 1200.06 2578 1197 2561.09 1163.14 2583.71 1139.67 2555 1115 2543.96 1105.51 \ 2503.76 1111.74 2490 1107 2482.65 1104.47 2482.45 1100.22 2475 1098 2463.92 1094.7 2275.02 1098.33 2267 1090 2260.84 1083.59 2260.95 \ 1076.51 2267 1070 2283.53 1052.21 2359.47 1079.79 2376 1062 2388.99 1048.02 2381.65 991.18 2376.97 962.59 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2379.41 962.37 2375.82 955.88 2374.58 963.19 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2298 1078.1 0 62 13 -model_path_5s ", label=model_path_5s, lp="2298,1080", pos="e,2375.6,954.39 2583.7,1205.8 2581.6,1203.1 2579.5,1200.1 2578,1197 2561.1,1163.1 2583.7,1139.7 2555,1115 2544,1105.5 2503.8,1111.7 \ 2490,1107 2482.6,1104.5 2482.5,1100.2 2475,1098 2463.9,1094.7 2275,1098.3 2267,1090 2260.8,1083.6 2260.9,1076.5 2267,1070 2283.5,\ 1052.2 2359.5,1079.8 2376,1062 2389,1048 2381.7,991.18 2377,962.59"]; passdata -> bacterial_ncrna [_draw_="c 7 -#000000 B 16 2693.44 1211.91 2729.94 1209.61 2771.12 1205.22 2808 1197 2839.99 1189.87 2877 1203.77 2877 1171 2877 1171 2877 \ 1171 2877 1101.5 2877 1047.95 2811 965.08 2808 963 2804.23 960.39 2798.01 958.16 2790.42 956.26 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2791.26 953.93 2783.89 954.79 2790.18 958.71 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2913.5 1078.1 0 77 15 -rfam_amendments ", label=rfam_amendments, lp="2913.5,1080", pos="e,2782.4,954.46 2693.4,1211.9 2729.9,1209.6 2771.1,1205.2 2808,1197 2840,1189.9 2877,1203.8 2877,1171 2877,1171 2877,1171 2877,1101.5 \ 2877,1047.9 2811,965.08 2808,963 2804.2,960.39 2798,958.16 2790.4,956.26"]; passdata -> bacterial_ncrna [_draw_="c 7 -#000000 B 10 2672.39 1205.51 2688.73 1199.15 2701 1188.53 2701 1171 2701 1171 2701 1171 2701 989 2701 980.31 2701 970.63 2701 \ 962.65 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2703.45 962.76 2701 955.76 2698.55 962.76 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2725.5 1078.1 0 49 10 -model_path ", label=model_path, lp="2725.5,1080", pos="e,2701,954.24 2672.4,1205.5 2688.7,1199.1 2701,1188.5 2701,1171 2701,1171 2701,1171 2701,989 2701,980.31 2701,970.63 2701,962.65"]; passdata -> bacterial_ncrna [_draw_="c 7 -#000000 B 10 2683.29 1205.54 2721.91 1199.36 2758 1188.81 2758 1171 2758 1171 2758 1171 2758 989 2758 974.91 2746.76 964.85 \ 2734.26 958.03 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2735.55 955.93 2728.19 955.04 2733.39 960.33 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2777 1078.1 0 38 8 -taxon_db ", label=taxon_db, lp="2777,1080", pos="e,2726.8,954.37 2683.3,1205.5 2721.9,1199.4 2758,1188.8 2758,1171 2758,1171 2758,1171 2758,989 2758,974.91 2746.8,964.85 2734.3,\ 958.03"]; passdata -> bacterial_ncrna [_draw_="c 7 -#000000 B 10 2693.44 1210.96 2748.01 1206.43 2804 1195.76 2804 1171 2804 1171 2804 1171 2804 989 2804 974.04 2794.63 964.19 \ 2781.55 957.73 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2782.72 955.57 2775.32 955.08 2780.8 960.08 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2836.5 1078.1 0 65 14 -rfam_stockholm ", label=rfam_stockholm, lp="2836.5,1080", pos="e,2773.9,954.48 2693.4,1211 2748,1206.4 2804,1195.8 2804,1171 2804,1171 2804,1171 2804,989 2804,974.04 2794.6,964.19 2781.5,957.73"]; passdata -> Validate_Annotation_xsltproc_asndisc [_draw_="c 7 -#000000 B 28 2693.21 1213.91 2951.9 1213.48 3615.32 1211.01 3661 1197 3674.2 1192.95 3678.29 1190.71 3687 1180 3695.44 1169.63 \ 3694.46 1164.89 3698 1152 3722.14 1064.07 3756.64 837.89 3764 747 3764.32 743.01 3764.2 742 3764 738 3760.66 670.2 3749 653.88 3749 \ 586 3749 586 3749 586 3749 246.5 3749 230.99 3744.54 226.37 3734 215 3729.56 210.21 3656.17 169.27 3618.27 148.29 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3619.83 146.36 3612.52 145.11 3617.46 150.64 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3765.5 673.1 0 15 4 -xslt ", label=xslt, lp="3765.5,675", pos="e,3611.2,144.38 2693.2,1213.9 2951.9,1213.5 3615.3,1211 3661,1197 3674.2,1193 3678.3,1190.7 3687,1180 3695.4,1169.6 3694.5,1164.9 \ 3698,1152 3722.1,1064.1 3756.6,837.89 3764,747 3764.3,743.01 3764.2,742 3764,738 3760.7,670.2 3749,653.88 3749,586 3749,586 3749,\ 586 3749,246.5 3749,230.99 3744.5,226.37 3734,215 3729.6,210.21 3656.2,169.27 3618.3,148.29"]; passdata -> ab_initio_training [_draw_="c 7 -#000000 B 19 2693.32 1210.83 2750.33 1208.33 2815.27 1204.05 2843 1197 2860.54 1192.54 2865.7 1191.1 2880 1180 2926.35 1144.03 \ 2990.6 1115.05 2953 1070 2940.26 1054.74 2926.22 1071.93 2909 1062 2831.67 1017.42 2855.28 940.88 2769 918 2732.95 908.44 2540.53 \ 904.24 2390.13 902.4 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2390.19 899.96 2383.16 902.32 2390.13 904.86 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2931 1055.6 0 44 10 -thresholds ", label=thresholds, lp="2931,1057.5", pos="e,2381.6,902.3 2693.3,1210.8 2750.3,1208.3 2815.3,1204.1 2843,1197 2860.5,1192.5 2865.7,1191.1 2880,1180 2926.4,1144 2990.6,1115 \ 2953,1070 2940.3,1054.7 2926.2,1071.9 2909,1062 2831.7,1017.4 2855.3,940.88 2769,918 2733,908.44 2540.5,904.24 2390.1,902.4"]; passdata -> ab_initio_training [_draw_="c 7 -#000000 B 40 2549.67 1205.56 2545.32 1203.34 2541.29 1200.54 2538 1197 2512.43 1169.55 2546 1139.96 2518 1115 2507.3 1105.46 \ 2467.76 1111.01 2454 1107 2445.03 1104.39 2444.07 1100.24 2435 1098 2414.27 1092.88 2261.73 1100.25 2243 1090 2233.48 1084.79 2238.15 \ 1075.84 2229 1070 2211.88 1059.07 2197.05 1077.57 2184 1062 2179.39 1056.5 2156.19 1009.14 2198 963 2207.56 952.46 2220.29 966.25 \ 2229 955 2234.44 947.97 2235.06 941.5 2229 935 2211.68 916.42 2132.32 945.58 2115 927 2112.27 924.07 2112.45 921.08 2115 918 2116.82 \ 915.8 2119.9 913.89 2123.87 912.22 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2124.6 914.56 2130.42 909.96 2123.01 909.92 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2212.5 1055.6 0 57 13 -uniColl_cache ", label=uniColl_cache, lp="2212.5,1057.5", pos="e,2131.9,909.47 2549.7,1205.6 2545.3,1203.3 2541.3,1200.5 2538,1197 2512.4,1169.5 2546,1140 2518,1115 2507.3,1105.5 2467.8,1111 \ 2454,1107 2445,1104.4 2444.1,1100.2 2435,1098 2414.3,1092.9 2261.7,1100.3 2243,1090 2233.5,1084.8 2238.1,1075.8 2229,1070 2211.9,\ 1059.1 2197,1077.6 2184,1062 2179.4,1056.5 2156.2,1009.1 2198,963 2207.6,952.46 2220.3,966.25 2229,955 2234.4,947.97 2235.1,941.5 \ 2229,935 2211.7,916.42 2132.3,945.58 2115,927 2112.3,924.07 2112.5,921.08 2115,918 2116.8,915.8 2119.9,913.89 2123.9,912.22"]; passdata -> ab_initio_training [_draw_="c 7 -#000000 B 31 2560.34 1205.58 2556.1 1203.35 2552.13 1200.54 2549 1197 2524 1168.74 2555.35 1139.9 2527 1115 2516.89 1106.12 \ 2479.9 1110.81 2467 1107 2458.04 1104.35 2457.07 1100.24 2448 1098 2426.95 1092.81 2269.63 1103.91 2253 1090 2242 1080.8 2246 1072.84 \ 2246 1058.5 2246 1058.5 2246 1058.5 2246 966.5 2246 951.67 2246.77 944.02 2235 935 2215.72 920.22 2142.53 944.79 2126 927 2120.79 \ 921.39 2121.18 916.99 2125.06 913.54 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2126.14 915.75 2131 910.15 2123.71 911.5 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2277 1055.6 0 62 14 -selenoproteins ", label=selenoproteins, lp="2277,1057.5", pos="e,2132.3,909.4 2560.3,1205.6 2556.1,1203.3 2552.1,1200.5 2549,1197 2524,1168.7 2555.4,1139.9 2527,1115 2516.9,1106.1 2479.9,1110.8 \ 2467,1107 2458,1104.4 2457.1,1100.2 2448,1098 2426.9,1092.8 2269.6,1103.9 2253,1090 2242,1080.8 2246,1072.8 2246,1058.5 2246,1058.5 \ 2246,1058.5 2246,966.5 2246,951.67 2246.8,944.02 2235,935 2215.7,920.22 2142.5,944.79 2126,927 2120.8,921.39 2121.2,916.99 2125.1,\ 913.54"]; passdata -> ab_initio_training [_draw_="c 7 -#000000 B 34 2580.75 1205.63 2578.01 1203.05 2575.19 1200.08 2573 1197 2549.8 1164.43 2568.02 1138.94 2536 1115 2515.16 1099.42 \ 2502.77 1114.99 2478 1107 2469.86 1104.38 2469.25 1100.23 2461 1098 2450.37 1095.13 2270.63 1097.94 2263 1090 2256.84 1083.59 2257.28 \ 1076.8 2263 1070 2276.36 1054.12 2295.64 1077.88 2309 1062 2311.57 1058.94 2310 1056.87 2309 1053 2294.09 995.01 2294.33 967.43 \ 2244 935 2224.7 922.56 2156.59 943.85 2141 927 2135.51 921.07 2137.44 916.45 2143.21 912.87 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2144.1 915.16 2149.44 910.01 2142.05 910.7 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2339 1055.6 0 58 13 -naming_sqlite ", label=naming_sqlite, lp="2339,1057.5", pos="e,2150.8,909.38 2580.8,1205.6 2578,1203.1 2575.2,1200.1 2573,1197 2549.8,1164.4 2568,1138.9 2536,1115 2515.2,1099.4 2502.8,1115 \ 2478,1107 2469.9,1104.4 2469.3,1100.2 2461,1098 2450.4,1095.1 2270.6,1097.9 2263,1090 2256.8,1083.6 2257.3,1076.8 2263,1070 2276.4,\ 1054.1 2295.6,1077.9 2309,1062 2311.6,1058.9 2310,1056.9 2309,1053 2294.1,995.01 2294.3,967.43 2244,935 2224.7,922.56 2156.6,943.85 \ 2141,927 2135.5,921.07 2137.4,916.45 2143.2,912.87"]; passdata -> checkm [_draw_="c 7 -#000000 B 37 2693.25 1212.22 2938.16 1207.96 3538.41 1197.46 3541 1197 3563.7 1192.97 3574.6 1197.15 3590 1180 3609.81 1157.94 \ 3597.02 1143.56 3605 1115 3614.94 1079.4 3631 1072.96 3631 1036 3631 1036 3631 1036 3631 854 3631 842.03 3630.96 837.74 3624 828 \ 3616.72 817.81 3443.71 712.58 3437 702 3430.74 692.13 3433 687.69 3433 676 3433 676 3433 676 3433 471.5 3433 402.34 3427 385.16 \ 3427 316 3427 316 3427 316 3427 224 3427 198.09 1708.75 183.43 1437.79 181.28 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1438.01 178.83 1430.99 181.22 1437.97 183.73 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3475.5 695.6 0 77 16 -checkm_data_path ", label=checkm_data_path, lp="3475.5,697.5", pos="e,1429.5,181.21 2693.2,1212.2 2938.2,1208 3538.4,1197.5 3541,1197 3563.7,1193 3574.6,1197.1 3590,1180 3609.8,1157.9 3597,1143.6 \ 3605,1115 3614.9,1079.4 3631,1073 3631,1036 3631,1036 3631,1036 3631,854 3631,842.03 3631,837.74 3624,828 3616.7,817.81 3443.7,712.58 \ 3437,702 3430.7,692.13 3433,687.69 3433,676 3433,676 3433,676 3433,471.5 3433,402.34 3427,385.16 3427,316 3427,316 3427,316 3427,\ 224 3427,198.09 1708.8,183.43 1437.8,181.28"]; passdata -> checkm [_draw_="c 7 -#000000 B 34 2693.32 1212.19 2798.37 1210.35 2966.6 1207.42 3112 1205 3125.92 1204.77 3601.73 1205.17 3613 1197 3624.04 1189 \ 3653 1094.63 3653 1081 3653 1081 3653 1081 3653 831.5 3653 809.46 3638.56 807.62 3623 792 3615.89 784.86 3611.73 784.36 3608 775 \ 3594.5 741.15 3613.2 729.07 3608 693 3583.08 520.12 3497 490.67 3497 316 3497 316 3497 316 3497 224 3497 208.27 3487.38 204.37 3473 \ 198 3424.54 176.55 1708.08 180.19 1437.69 180.9 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1437.91 178.45 1430.91 180.92 1437.92 183.35 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3627 695.6 0 38 8 -taxon_db ", label=taxon_db, lp="3627,697.5", pos="e,1429.4,180.92 2693.3,1212.2 2798.4,1210.3 2966.6,1207.4 3112,1205 3125.9,1204.8 3601.7,1205.2 3613,1197 3624,1189 3653,1094.6 \ 3653,1081 3653,1081 3653,1081 3653,831.5 3653,809.46 3638.6,807.62 3623,792 3615.9,784.86 3611.7,784.36 3608,775 3594.5,741.15 3613.2,\ 729.07 3608,693 3583.1,520.12 3497,490.67 3497,316 3497,316 3497,316 3497,224 3497,208.27 3487.4,204.37 3473,198 3424.5,176.55 1708.1,\ 180.19 1437.7,180.9"]; passdata -> checkm [_draw_="c 7 -#000000 B 31 2693.21 1212.23 2942.84 1207.91 3563.34 1197.16 3564 1197 3580.82 1192.98 3587.48 1192.89 3599 1180 3637.17 1137.29 \ 3642 1115.78 3642 1058.5 3642 1058.5 3642 1058.5 3642 854 3642 841.27 3636.95 838.66 3630 828 3589.27 765.46 3552.09 768.89 3519 \ 702 3468.56 600.05 3469 564.75 3469 451 3469 451 3469 451 3469 224 3469 211.22 3529.76 211.31 2984 198 2364.93 182.9 1609.26 181.21 \ 1437.75 181.02 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1437.85 178.57 1430.85 181.02 1437.85 183.47 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3563 695.6 0 88 21 -filter_for_raw_checkm ", label=filter_for_raw_checkm, lp="3563,697.5", pos="e,1429.3,181.02 2693.2,1212.2 2942.8,1207.9 3563.3,1197.2 3564,1197 3580.8,1193 3587.5,1192.9 3599,1180 3637.2,1137.3 3642,1115.8 \ 3642,1058.5 3642,1058.5 3642,1058.5 3642,854 3642,841.27 3636.9,838.66 3630,828 3589.3,765.46 3552.1,768.89 3519,702 3468.6,600.05 \ 3469,564.75 3469,451 3469,451 3469,451 3469,224 3469,211.22 3529.8,211.31 2984,198 2364.9,182.9 1609.3,181.21 1437.8,181.02"]; passdata -> Prepare_Unannotated_Sequences [_draw_="c 7 -#000000 B 16 2488.66 1214.73 2301.06 1215.59 1909 1215.05 1774 1197 1757.65 1194.81 1754.27 1190.72 1738 1188 1697.08 1181.17 \ 1686.21 1184.76 1645 1180 1531.24 1166.86 1503.35 1159.32 1390 1143 1373.4 1140.61 1355.5 1138.05 1338.75 1135.65 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1339.4 1133.27 1332.13 1134.71 1338.71 1138.12 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1664 1168.1 0 38 8 -taxon_db ", label=taxon_db, lp="1664,1170", pos="e,1330.6,1134.5 2488.7,1214.7 2301.1,1215.6 1909,1215 1774,1197 1757.7,1194.8 1754.3,1190.7 1738,1188 1697.1,1181.2 1686.2,1184.8 \ 1645,1180 1531.2,1166.9 1503.4,1159.3 1390,1143 1373.4,1140.6 1355.5,1138 1338.7,1135.7"]; Create_Genomic_BLASTdb -> protein_alignment [_draw_="c 7 -#000000 B 37 1120.38 1115.82 1121.02 1105.12 1122.72 1085.88 1127 1070 1140.44 1020.19 1151.84 1010.49 1172 963 1177.29 950.54 \ 1173.17 943.13 1184 935 1207.27 917.52 1221.63 936.9 1249 927 1255.96 924.49 1256.49 921.51 1263 918 1270.7 913.84 1275.07 916.44 \ 1281 910 1287.38 903.07 1280.96 896.25 1288 890 1300.25 879.11 1312.38 893.56 1324 882 1365.06 841.18 1334.12 809.73 1353 755 1355.72 \ 747.11 1357.05 745.36 1361 738 1372.99 715.68 1372.69 702.92 1396 693 1413.29 685.64 1494.92 681.43 1575.32 679.04 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1575.16 681.5 1582.08 678.84 1575.01 676.6 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1311 898.1 0 46 11 -blastdb_dir ", label=blastdb_dir, lp="1311,900", pos="e,1583.6,678.8 1120.4,1115.8 1121,1105.1 1122.7,1085.9 1127,1070 1140.4,1020.2 1151.8,1010.5 1172,963 1177.3,950.54 1173.2,943.13 \ 1184,935 1207.3,917.52 1221.6,936.9 1249,927 1256,924.49 1256.5,921.51 1263,918 1270.7,913.84 1275.1,916.44 1281,910 1287.4,903.07 \ 1281,896.25 1288,890 1300.3,879.11 1312.4,893.56 1324,882 1365.1,841.18 1334.1,809.73 1353,755 1355.7,747.11 1357,745.36 1361,738 \ 1373,715.68 1372.7,702.92 1396,693 1413.3,685.64 1494.9,681.43 1575.3,679.04"]; bacterial_ncrna -> ab_initio_training [_draw_="c 7 -#000000 B 7 2707.73 935.78 2711.52 930.13 2714.65 922.81 2710 918 2698.65 906.26 2529.84 902.42 2390.28 901.27 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2390.51 898.82 2383.49 901.21 2390.47 903.72 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2740 920.6 0 56 12 -ncrna_annots ", label=ncrna_annots, lp="2740,922.5", pos="e,2382,901.2 2707.7,935.78 2711.5,930.13 2714.6,922.81 2710,918 2698.6,906.26 2529.8,902.42 2390.3,901.27"]; Validate_Annotation_xsltproc_asndisc -> Validate_Annotation_collect_annot_stats [_draw_="c 7 -#000000 B 7 3596.54 125.54 3598.01 108.66 3603.31 70.22 3622 45 3628.59 36.11 3638.25 28.89 3647.46 23.42 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3648.42 25.69 3653.35 20.15 3646.05 21.4 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3633 80.1 0 22 5 -input ", label=input, lp="3633,82", pos="e,3654.7,19.415 3596.5,125.54 3598,108.66 3603.3,70.215 3622,45 3628.6,36.112 3638.2,28.888 3647.5,23.421"]; Prepare_Unannotated_Sequences_asndisc_evaluate -> initial_asndisc_error_diag [_draw_="c 7 -#000000 B 40 1620.5 980.57 1611.49 978.05 1601.81 975.13 1593 972 1575.18 965.67 1570.78 963.71 1554 955 1400.01 875.08 1365.82 \ 843.96 1235 730 1151.34 657.12 1103.68 652.83 1062 550 1043.6 504.6 1036.72 485.45 1055 440 1060.75 425.71 1073.25 429.29 1079 415 \ 1082.32 406.75 1081.85 403.42 1079 395 1069.93 368.21 1058.87 363.46 1034 350 1001.42 332.37 748.88 269.22 713 260 665.7 247.85 \ 649.06 258.04 606 235 580.22 221.2 575.83 213.18 558 190 537.99 164 548.11 146.12 523 125 510.12 114.17 470.97 102.04 439.69 93.61 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 440.38 91.25 432.98 91.83 439.12 95.99 ", pos="e,431.52,91.438 1620.5,980.57 1611.5,978.05 1601.8,975.13 1593,972 1575.2,965.67 1570.8,963.71 1554,955 1400,875.08 1365.8,843.96 \ 1235,730 1151.3,657.12 1103.7,652.83 1062,550 1043.6,504.6 1036.7,485.45 1055,440 1060.7,425.71 1073.3,429.29 1079,415 1082.3,406.75 \ 1081.9,403.42 1079,395 1069.9,368.21 1058.9,363.46 1034,350 1001.4,332.37 748.88,269.22 713,260 665.7,247.85 649.06,258.04 606,235 \ 580.22,221.2 575.83,213.18 558,190 537.99,164 548.11,146.12 523,125 510.12,114.17 470.97,102.04 439.69,93.606"]; Prepare_Unannotated_Sequences_asndisc_evaluate -> Cache_Entrez_Gene [_draw_="c 7 -#000000 B 10 1612.61 981.81 1608.03 981.14 1603.42 980.52 1599 980 1548.55 974.11 1534.38 983.9 1485 972 1472.12 968.9 1458.5 \ 963.33 1447.4 958.14 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1448.54 955.97 1441.17 955.13 1446.41 960.38 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1490.5 965.6 0 11 2 -go ", label=go, lp="1490.5,967.5", pos="e,1439.8,954.47 1612.6,981.81 1608,981.14 1603.4,980.52 1599,980 1548.6,974.11 1534.4,983.9 1485,972 1472.1,968.9 1458.5,963.33 \ 1447.4,958.14"]; Prepare_Unannotated_Sequences_asndisc_evaluate -> bacterial_trna [_draw_="c 7 -#000000 B 10 1666.04 980.74 1675.4 974.75 1688.96 967.02 1702 963 1735.3 952.72 1745.34 958.59 1780 955 1791.29 953.83 1803.42 \ 952.57 1814.91 951.36 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1814.92 953.83 1821.63 950.66 1814.41 948.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1707.5 965.6 0 11 2 -go ", label=go, lp="1707.5,967.5", pos="e,1823.1,950.5 1666,980.74 1675.4,974.75 1689,967.02 1702,963 1735.3,952.72 1745.3,958.59 1780,955 1791.3,953.83 1803.4,952.57 1814.9,\ 951.36"]; Prepare_Unannotated_Sequences_asndisc_evaluate -> protein_alignment [_draw_="c 7 -#000000 B 28 1612.71 981.82 1599.74 979.01 1587.39 975.61 1582 972 1544.68 947.04 1555.95 920.5 1523 890 1494.75 863.85 1483.57 \ 861.92 1449 845 1440.03 840.61 1437.19 840.91 1428 837 1411.72 830.07 1402.84 833.98 1392 820 1369.35 790.78 1371.12 774.33 1378 \ 738 1380.49 724.86 1380.04 719.92 1389 710 1400.06 697.76 1406.07 697.3 1422 693 1451.35 685.07 1513.24 680.8 1575.37 678.52 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1575.32 680.97 1582.23 678.27 1575.15 676.07 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1433.5 830.6 0 11 2 -go ", label=go, lp="1433.5,832.5", pos="e,1583.7,678.22 1612.7,981.82 1599.7,979.01 1587.4,975.61 1582,972 1544.7,947.04 1556,920.5 1523,890 1494.7,863.85 1483.6,861.92 \ 1449,845 1440,840.61 1437.2,840.91 1428,837 1411.7,830.07 1402.8,833.98 1392,820 1369.3,790.78 1371.1,774.33 1378,738 1380.5,724.86 \ 1380,719.92 1389,710 1400.1,697.76 1406.1,697.3 1422,693 1451.3,685.07 1513.2,680.8 1575.4,678.52"]; Prepare_Unannotated_Sequences_asndisc_evaluate -> orfs_hmms [_draw_="c 7 -#000000 B 10 1643.97 980.7 1622.86 962.45 1574.4 916.35 1558 865 1553 849.33 1549.72 842.21 1558 828 1558.64 826.9 1559.38 \ 825.87 1560.2 824.9 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1561.75 826.8 1565.4 820.34 1558.52 823.11 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1585.5 898.1 0 11 2 -go ", label=go, lp="1585.5,900", pos="e,1566.5,819.35 1644,980.7 1622.9,962.45 1574.4,916.35 1558,865 1553,849.33 1549.7,842.21 1558,828 1558.6,826.9 1559.4,825.87 1560.2,\ 824.9"]; Prepare_Unannotated_Sequences_asndisc_evaluate -> bacterial_noncoding [_draw_="c 7 -#000000 B 16 1695.09 980.7 1696.74 980.45 1698.39 980.21 1700 980 1751.68 973.21 1766.87 986.28 1817 972 1825.22 969.66 1825.72 \ 965.14 1834 963 1876.6 951.96 2186.03 956.82 2230 955 2248.97 954.22 2269.32 953.11 2288.59 951.94 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2288.71 954.38 2295.55 951.5 2288.41 949.49 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1839.5 965.6 0 11 2 -go ", label=go, lp="1839.5,967.5", pos="e,2297.1,951.41 1695.1,980.7 1696.7,980.45 1698.4,980.21 1700,980 1751.7,973.21 1766.9,986.28 1817,972 1825.2,969.66 1825.7,965.14 \ 1834,963 1876.6,951.96 2186,956.82 2230,955 2249,954.22 2269.3,953.11 2288.6,951.94"]; Prepare_Unannotated_Sequences_asndisc_evaluate -> bacterial_ncrna [_draw_="c 7 -#000000 B 16 1695.08 980.6 1696.74 980.38 1698.38 980.17 1700 980 1861.32 962.58 1903.15 983.59 2065 972 2098.05 969.63 2105.96 \ 965.42 2139 963 2278.23 952.78 2313.47 959.31 2453 955 2499.52 953.56 2550.95 951.74 2594.85 950.1 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2594.83 952.56 2601.73 949.85 2594.65 947.66 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2144.5 965.6 0 11 2 -go ", label=go, lp="2144.5,967.5", pos="e,2603.2,949.79 1695.1,980.6 1696.7,980.38 1698.4,980.17 1700,980 1861.3,962.58 1903.2,983.59 2065,972 2098,969.63 2106,965.42 2139,\ 963 2278.2,952.78 2313.5,959.31 2453,955 2499.5,953.56 2550.9,951.74 2594.9,950.1"]; Prepare_Unannotated_Sequences_asndisc_evaluate -> ab_initio_training [_draw_="c 7 -#000000 B 10 1651.21 980.85 1647.76 969.1 1643.63 947.48 1655 935 1674.42 913.68 1986.11 910.72 2003 910 2007.86 909.79 2012.79 \ 909.58 2017.76 909.36 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2017.77 911.82 2024.66 909.07 2017.56 906.92 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1660.5 943.1 0 11 2 -go ", label=go, lp="1660.5,945", pos="e,2026.2,909 1651.2,980.85 1647.8,969.1 1643.6,947.48 1655,935 1674.4,913.68 1986.1,910.72 2003,910 2007.9,909.79 2012.8,909.58 \ 2017.8,909.36"]; Prepare_Unannotated_Sequences_asndisc_evaluate -> bacterial_mobile_elem [_draw_="c 7 -#000000 B 7 1655.53 980.58 1657 974.84 1659.8 967.48 1665 963 1667.58 960.77 1672.35 958.69 1678.19 956.79 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1678.58 959.23 1684.62 954.92 1677.21 954.52 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1670.5 965.6 0 11 2 -go ", label=go, lp="1670.5,967.5", pos="e,1686.1,954.5 1655.5,980.58 1657,974.84 1659.8,967.48 1665,963 1667.6,960.77 1672.4,958.69 1678.2,956.79"]; ab_initio_training -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 10 2381.98 896.09 2494.18 891.78 2618 881.29 2618 856 2618 856 2618 856 2618 674 2618 657.37 2648.95 647.11 2684.45 \ 640.8 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2684.57 643.26 2691.07 639.69 2683.76 638.43 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2645.5 763.1 0 55 10 -hmm_params ", label=hmm_params, lp="2645.5,765", pos="e,2692.6,639.43 2382,896.09 2494.2,891.78 2618,881.29 2618,856 2618,856 2618,856 2618,674 2618,657.37 2649,647.11 2684.4,640.8"]; ab_initio_training -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 10 2253.5 890.51 2286.56 883.39 2324 871.82 2324 856 2324 856 2324 856 2324 674 2324 653.36 2397.75 642.34 2486.45 \ 636.55 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2486.46 639.01 2493.29 636.12 2486.15 634.12 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2347 763.1 0 46 10 -annotation ", label=annotation, lp="2347,765", pos="e,2494.8,636.03 2253.5,890.51 2286.6,883.39 2324,871.82 2324,856 2324,856 2324,856 2324,674 2324,653.36 2397.8,642.34 2486.5,636.55"]; ab_initio_training -> ab_initio_antifam [_draw_="c 7 -#000000 B 4 2116.68 890.5 2041.91 883.23 1934.45 872.78 1857.44 865.28 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1857.85 862.86 1850.65 864.62 1857.38 867.74 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2040 875.6 0 36 7 -models1 ", label=models1, lp="2040,877.5", pos="e,1849.1,864.48 2116.7,890.5 2041.9,883.23 1934.5,872.78 1857.4,865.28"]; Add_Locus_Tags -> bacterial_orthology_conditional [_draw_="c 7 -#000000 B 4 1742.13 490.99 1631.43 483.74 1348.58 465.2 1210.38 456.14 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1210.55 453.69 1203.4 455.68 1210.23 458.58 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1529 470.6 0 22 5 -input ", label=input, lp="1529,472.5", pos="e,1201.9,455.58 1742.1,490.99 1631.4,483.74 1348.6,465.2 1210.4,456.14"]; Final_Bacterial_Package_val_stats -> Validate_Annotation_xsltproc_asnvalidate [_draw_="c 7 -#000000 B 4 3661.48 125.58 3663.57 118.45 3666.64 108.02 3669.21 99.27 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3671.52 100.12 3671.14 92.72 3666.82 98.74 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3673.5 110.6 0 15 3 -xml ", label=xml, lp="3673.5,112.5", pos="e,3671.6,91.265 3661.5,125.58 3663.6,118.45 3666.6,108.02 3669.2,99.273"]; bacterial_mobile_elem -> ab_initio_training [_draw_="c 7 -#000000 B 10 1775.14 935.58 1788.02 932.98 1802.1 930.01 1815 927 1830.22 923.45 1833.55 920.39 1849 918 1853.65 917.28 1934.41 \ 913.39 2017.73 909.51 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2017.66 911.97 2024.54 909.2 2017.44 907.07 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1900 920.6 0 102 22 -Execute_CRISPRs_annots ", label=Execute_CRISPRs_annots, lp="1900,922.5", pos="e,2026.1,909.13 1775.1,935.58 1788,932.98 1802.1,930.01 1815,927 1830.2,923.45 1833.6,920.39 1849,918 1853.6,917.28 1934.4,913.39 \ 2017.7,909.51"]; checkm -> checkm_raw [_draw_="c 7 -#000000 B 4 1394.33 170.82 1379.06 154.53 1344.71 117.89 1325.55 97.46 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1327.52 95.97 1320.95 92.54 1323.95 99.32 ", pos="e,1319.9,91.438 1394.3,170.82 1379.1,154.53 1344.7,117.89 1325.6,97.455"]; checkm -> checkm_results [_draw_="c 7 -#000000 B 4 1402 170.82 1402 155.17 1402 120.71 1402 99.91 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1404.45 99.95 1402 92.95 1399.55 99.95 ", pos="e,1402,91.438 1402,170.82 1402,155.17 1402,120.71 1402,99.915"]; Generate_Annotation_Reports_gbk -> gbk [_draw_="c 7 -#000000 B 13 652.49 170.57 651.99 164.82 652.46 157.46 657 153 670.06 140.17 723.19 154.23 739 145 748.37 139.53 745.71 133.04 \ 753 125 758.46 118.98 773.48 106.29 785.46 96.42 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 786.69 98.58 790.55 92.25 783.59 94.79 ", pos="e,791.73,91.293 652.49,170.57 651.99,164.82 652.46,157.46 657,153 670.06,140.17 723.19,154.23 739,145 748.37,139.53 745.71,133.04 \ 753,125 758.46,118.98 773.48,106.29 785.46,96.421"]; Generate_Annotation_Reports_gbk -> ping_stop [_draw_="c 7 -#000000 B 7 655.26 170.57 656.61 164.66 659.39 157.11 665 153 678.63 143.02 720.68 147.57 745.32 145.34 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 745.44 147.8 752.03 144.39 744.75 142.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 675.5 155.6 0 21 6 -infile ", label=infile, lp="675.5,157.5", pos="e,753.53,144.17 655.26,170.57 656.61,164.66 659.39,157.11 665,153 678.63,143.02 720.68,147.57 745.32,145.34"]; Prepare_Unannotated_Sequences -> Prepare_Unannotated_Sequences_asnvalidate [_draw_="c 7 -#000000 B 7 1291.04 1115.56 1333.41 1097.75 1429.47 1057.58 1445 1053 1459.41 1048.75 1475.43 1045.32 1489.93 1042.68 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1490.29 1045.11 1496.77 1041.49 1489.45 1040.28 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1399.5 1078.1 0 3 1 -i ", label=i, lp="1399.5,1080", pos="e,1498.3,1041.2 1291,1115.6 1333.4,1097.7 1429.5,1057.6 1445,1053 1459.4,1048.7 1475.4,1045.3 1489.9,1042.7"]; Prepare_Unannotated_Sequences -> bacterial_annot_2nd_pass_genemark [_draw_="c 7 -#000000 B 28 1214.79 1115.55 1180.03 1108.67 1142 1097.41 1142 1081 1142 1081 1142 1081 1142 989 1142 961.33 1149.94 950.31 \ 1173 935 1197.25 918.9 1211.08 938.07 1238 927 1243.71 924.65 1256.8 915.28 1260 910 1293.59 854.57 1283 830.81 1283 766 1283 766 \ 1283 766 1283 674 1283 641.19 1840.21 649.03 1873 648 2077.49 641.6 2307.77 637.33 2486.15 634.68 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2486.13 637.13 2493.09 634.57 2486.06 632.23 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1296.5 875.6 0 39 8 -raw_seqs ", label=raw_seqs, lp="1296.5,877.5", pos="e,2494.6,634.55 1214.8,1115.5 1180,1108.7 1142,1097.4 1142,1081 1142,1081 1142,1081 1142,989 1142,961.33 1149.9,950.31 1173,935 \ 1197.2,918.9 1211.1,938.07 1238,927 1243.7,924.65 1256.8,915.28 1260,910 1293.6,854.57 1283,830.81 1283,766 1283,766 1283,766 1283,\ 674 1283,641.19 1840.2,649.03 1873,648 2077.5,641.6 2307.8,637.33 2486.2,634.68"]; Prepare_Unannotated_Sequences -> Prepare_Unannotated_Sequences_text [_draw_="c 7 -#000000 B 4 1276.59 1115.71 1280.36 1110.12 1285.45 1102.58 1289.91 1095.96 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1291.7 1097.69 1293.58 1090.52 1287.63 1094.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1299 1100.6 0 22 5 -input ", label=input, lp="1299,1102.5", pos="e,1294.4,1089.3 1276.6,1115.7 1280.4,1110.1 1285.4,1102.6 1289.9,1096"]; Prepare_Unannotated_Sequences -> Cache_Entrez_Gene [_draw_="c 7 -#000000 B 25 1267.48 1115.64 1264.61 1108.78 1260.47 1098.79 1257 1090 1250.54 1073.65 1254.42 1066.37 1243 1053 1238.35 1047.55 \ 1232.6 1051.2 1229 1045 1224.54 1037.31 1224.06 1032.39 1229 1025 1239.96 1008.6 1251.27 1014.19 1270 1008 1283.92 1003.4 1288.17 \ 1004.88 1302 1000 1338.94 986.97 1346.06 978.58 1382 963 1386.15 961.2 1390.55 959.35 1394.89 957.57 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1395.59 959.93 1401.15 955.02 1393.74 955.39 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1240 1033.1 0 22 5 -input ", label=input, lp="1240,1035", pos="e,1402.5,954.45 1267.5,1115.6 1264.6,1108.8 1260.5,1098.8 1257,1090 1250.5,1073.6 1254.4,1066.4 1243,1053 1238.3,1047.5 1232.6,1051.2 \ 1229,1045 1224.5,1037.3 1224.1,1032.4 1229,1025 1240,1008.6 1251.3,1014.2 1270,1008 1283.9,1003.4 1288.2,1004.9 1302,1000 1338.9,\ 986.97 1346.1,978.58 1382,963 1386.2,961.2 1390.6,959.35 1394.9,957.57"]; Prepare_Unannotated_Sequences -> Prepare_Unannotated_Sequences_pgapx_input_check [_draw_="c 7 -#000000 B 4 1358.96 1119.3 1522.45 1110.55 1869.47 1091.99 2011.94 1084.37 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2011.84 1086.83 2018.7 1084.01 2011.58 1081.94 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1756 1100.6 0 22 5 -input ", label=input, lp="1756,1102.5", pos="e,2020.2,1083.9 1359,1119.3 1522.5,1110.6 1869.5,1092 2011.9,1084.4"]; Prepare_Unannotated_Sequences -> Final_Bacterial_Package_std_validation [_draw_="c 7 -#000000 B 31 1189.6 1115.52 1167.63 1112.74 1148.62 1109.68 1144 1107 1074.33 1066.6 1090.46 1020.43 1034 963 1007.38 935.93 \ 985.77 943.01 967 910 942.83 867.5 952.53 847 966 800 969.4 788.15 975.27 787.02 978 775 979.97 766.33 978.73 763.86 978 755 969.3 \ 648.82 939 625.03 939 518.5 939 518.5 939 518.5 939 314 939 261.76 947.23 242.58 920 198 919.35 196.94 918.61 195.93 917.8 194.96 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 919.61 193.29 912.83 190.29 916.26 196.87 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 986 650.6 0 52 11 -master_desc ", label=master_desc, lp="986,652.5", pos="e,911.73,189.25 1189.6,1115.5 1167.6,1112.7 1148.6,1109.7 1144,1107 1074.3,1066.6 1090.5,1020.4 1034,963 1007.4,935.93 985.77,943.01 \ 967,910 942.83,867.5 952.53,847 966,800 969.4,788.15 975.27,787.02 978,775 979.97,766.33 978.73,763.86 978,755 969.3,648.82 939,\ 625.03 939,518.5 939,518.5 939,518.5 939,314 939,261.76 947.23,242.58 920,198 919.35,196.94 918.61,195.93 917.8,194.96"]; Prepare_Unannotated_Sequences -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 28 1243.78 1115.58 1219.81 1106.56 1186.4 1089.67 1171 1062 1160.47 1043.07 1181.61 963.52 1182 963 1186.76 956.63 \ 1191.98 960.19 1198 955 1206.22 947.91 1202.59 940.41 1212 935 1230.56 924.33 1287.99 934.61 1308 927 1314.23 924.63 1314.06 921.03 \ 1320 918 1330.77 912.51 1337.95 919.02 1346 910 1371.87 880.98 1348.68 763.53 1378 738 1385.18 731.75 1464.65 727.65 1548.2 725.05 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1548.13 727.5 1555.05 724.84 1547.98 722.6 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1338.5 920.6 0 37 8 -plasmids ", label=plasmids, lp="1338.5,922.5", pos="e,1556.6,724.79 1243.8,1115.6 1219.8,1106.6 1186.4,1089.7 1171,1062 1160.5,1043.1 1181.6,963.52 1182,963 1186.8,956.63 1192,960.19 \ 1198,955 1206.2,947.91 1202.6,940.41 1212,935 1230.6,924.33 1288,934.61 1308,927 1314.2,924.63 1314.1,921.03 1320,918 1330.8,912.51 \ 1338,919.02 1346,910 1371.9,880.98 1348.7,763.53 1378,738 1385.2,731.75 1464.6,727.65 1548.2,725.05"]; Prepare_Unannotated_Sequences -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 28 1215.28 1115.5 1200.07 1110.5 1185.04 1102.57 1175 1090 1144.49 1051.78 1161.09 1027.67 1172 980 1173.79 972.19 \ 1173.99 969.94 1178 963 1186.2 948.81 1187.61 942.85 1202 935 1224.84 922.53 1237.05 939.26 1260 927 1264.72 924.48 1263.26 920.48 \ 1268 918 1281.29 911.06 1324.12 920.31 1335 910 1363.31 883.17 1337.54 759.63 1370 738 1385.96 727.36 1465.88 722.88 1548.25 721.16 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1548.28 723.61 1555.23 721.03 1548.18 718.72 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1287.5 920.6 0 39 8 -raw_seqs ", label=raw_seqs, lp="1287.5,922.5", pos="e,1556.7,721 1215.3,1115.5 1200.1,1110.5 1185,1102.6 1175,1090 1144.5,1051.8 1161.1,1027.7 1172,980 1173.8,972.19 1174,969.94 1178,\ 963 1186.2,948.81 1187.6,942.85 1202,935 1224.8,922.53 1237,939.26 1260,927 1264.7,924.48 1263.3,920.48 1268,918 1281.3,911.06 1324.1,\ 920.31 1335,910 1363.3,883.17 1337.5,759.63 1370,738 1386,727.36 1465.9,722.88 1548.2,721.16"]; Prepare_Unannotated_Sequences -> orfs_hmms [_draw_="c 7 -#000000 B 31 1264.92 1115.84 1262.96 1113.08 1260.82 1109.96 1259 1107 1254.53 1099.72 1253.87 1097.62 1250 1090 1241.72 1073.69 \ 1242.61 1067.89 1232 1053 1229.08 1048.9 1226.58 1049.32 1224 1045 1204.63 1012.62 1176.6 990.9 1202 963 1214.77 948.97 1269.17 \ 961.48 1287 955 1301.71 949.65 1301.48 940.85 1316 935 1336.47 926.76 1347.36 940.26 1365 927 1403.93 897.73 1372.13 855.98 1412 \ 828 1415.49 825.55 1420.29 823.43 1426.09 821.6 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1426.37 824.07 1432.47 819.84 1425.07 819.34 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1213.5 965.6 0 23 5 -inseq ", label=inseq, lp="1213.5,967.5", pos="e,1433.9,819.44 1264.9,1115.8 1263,1113.1 1260.8,1110 1259,1107 1254.5,1099.7 1253.9,1097.6 1250,1090 1241.7,1073.7 1242.6,1067.9 \ 1232,1053 1229.1,1048.9 1226.6,1049.3 1224,1045 1204.6,1012.6 1176.6,990.9 1202,963 1214.8,948.97 1269.2,961.48 1287,955 1301.7,\ 949.65 1301.5,940.85 1316,935 1336.5,926.76 1347.4,940.26 1365,927 1403.9,897.73 1372.1,855.98 1412,828 1415.5,825.55 1420.3,823.43 \ 1426.1,821.6"]; Prepare_Unannotated_Sequences -> Final_Bacterial_Package_final_bact_asn [_draw_="c 7 -#000000 B 37 1187.21 1115.5 1173.78 1113.21 1162.25 1110.39 1156 1107 1147.14 1102.19 1145.06 1099.22 1141 1090 1110.09 1019.81 \ 1082.56 980.51 1127 918 1133.27 909.18 1141.99 917.28 1150 910 1163.4 897.83 1152.66 884.04 1167 873 1183.44 860.34 1199.64 880.88 \ 1213 865 1218.72 858.2 1215.67 853.48 1213 845 1174.22 721.99 1079.34 734.83 1040 612 1020.21 550.21 1027.7 531.82 1016 468 1012.32 \ 447.94 1015.33 441.62 1007 423 1005.19 418.94 1002.86 419.04 1001 415 995.54 403.14 992.5 388.65 990.84 377.67 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 993.3 377.52 989.95 370.9 988.44 378.16 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1174 740.6 0 52 11 -master_desc ", label=master_desc, lp="1174,742.5", pos="e,989.76,369.4 1187.2,1115.5 1173.8,1113.2 1162.3,1110.4 1156,1107 1147.1,1102.2 1145.1,1099.2 1141,1090 1110.1,1019.8 1082.6,980.51 \ 1127,918 1133.3,909.18 1142,917.28 1150,910 1163.4,897.83 1152.7,884.04 1167,873 1183.4,860.34 1199.6,880.88 1213,865 1218.7,858.2 \ 1215.7,853.48 1213,845 1174.2,721.99 1079.3,734.83 1040,612 1020.2,550.21 1027.7,531.82 1016,468 1012.3,447.94 1015.3,441.62 1007,\ 423 1005.2,418.94 1002.9,419.04 1001,415 995.54,403.14 992.5,388.65 990.84,377.67"]; Prepare_Unannotated_Sequences -> ab_initio_training [_draw_="c 7 -#000000 B 28 1305.03 1115.57 1331.53 1108.9 1369.2 1099.22 1402 1090 1431.51 1081.7 1437.94 1075.98 1468 1070 1503.48 1062.94 \ 1513.71 1069.97 1549 1062 1560.52 1059.4 1562.61 1056.12 1574 1053 1656.05 1030.52 1678.46 1033.09 1762 1017 1846.91 1000.65 1867.28 \ 991.32 1953 980 1977.74 976.73 2044.15 985.71 2065 972 2087.59 957.14 2071.03 933.76 2093 918 2096.58 915.43 2102.35 913.24 2109.43 \ 911.38 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 2109.84 913.8 2116.1 909.82 2108.73 909.02 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1816.5 1010.6 0 23 5 -inseq ", label=inseq, lp="1816.5,1012.5", pos="e,2117.6,909.48 1305,1115.6 1331.5,1108.9 1369.2,1099.2 1402,1090 1431.5,1081.7 1437.9,1076 1468,1070 1503.5,1062.9 1513.7,1070 \ 1549,1062 1560.5,1059.4 1562.6,1056.1 1574,1053 1656.1,1030.5 1678.5,1033.1 1762,1017 1846.9,1000.6 1867.3,991.32 1953,980 1977.7,\ 976.73 2044.2,985.71 2065,972 2087.6,957.14 2071,933.76 2093,918 2096.6,915.43 2102.3,913.24 2109.4,911.38"]; Final_Bacterial_Package_dumb_down_as_required -> Validate_Annotation_proc_annot_stats [_draw_="c 7 -#000000 B 4 860.91 312.94 1250.71 306.96 3174.46 277.44 3535.53 271.9 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3535.54 274.35 3542.51 271.79 3535.47 269.45 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 2454 290.6 0 22 5 -input ", label=input, lp="2454,292.5", pos="e,3544,271.77 860.91,312.94 1250.7,306.96 3174.5,277.44 3535.5,271.9"]; Final_Bacterial_Package_dumb_down_as_required -> Final_Bacterial_Package_ent2sqn [_draw_="c 7 -#000000 B 10 755.75 305.57 748.06 303.23 740.13 300.38 733 297 726.65 293.99 726.1 291.48 720 288 716.96 286.27 713.71 284.57 \ 710.45 282.96 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 711.65 280.81 704.27 280.02 709.55 285.24 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 756 290.6 0 46 10 -annotation ", label=annotation, lp="756,292.5", pos="e,702.91,279.37 755.75,305.57 748.06,303.23 740.13,300.38 733,297 726.65,293.99 726.1,291.48 720,288 716.96,286.27 713.71,284.57 \ 710.45,282.96"]; Final_Bacterial_Package_dumb_down_as_required -> Generate_Annotation_Reports_gff [_draw_="c 7 -#000000 B 7 802.36 305.7 827.73 285.61 895.37 233.43 957 198 960.03 196.26 963.28 194.55 966.54 192.93 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 967.44 195.22 972.71 190 965.34 190.79 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 896 245.6 0 22 5 -input ", label=input, lp="896,247.5", pos="e,974.08,189.35 802.36,305.7 827.73,285.61 895.37,233.43 957,198 960.03,196.26 963.28,194.55 966.54,192.93"]; Final_Bacterial_Package_dumb_down_as_required -> Final_Bacterial_Package_std_validation [_draw_="c 7 -#000000 B 10 797.7 305.87 805.64 294.29 820.18 272.21 830 252 841.18 228.98 831.83 216.03 850 198 851.67 196.34 853.52 194.84 \ 855.49 193.48 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 856.4 195.79 861.24 190.17 853.95 191.54 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 844 245.6 0 22 5 -inent ", label=inent, lp="844,247.5", pos="e,862.56,189.42 797.7,305.87 805.64,294.29 820.18,272.21 830,252 841.18,228.98 831.83,216.03 850,198 851.67,196.34 853.52,194.84 \ 855.49,193.48"]; Final_Bacterial_Package_dumb_down_as_required -> Final_Bacterial_Package_std_validation [_draw_="c 7 -#000000 B 7 788.07 305.63 782.19 291.83 772.83 263.75 783 243 795.93 216.6 825.3 201 850.99 192.06 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 851.5 194.47 857.39 189.96 849.97 189.81 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 806 245.6 0 46 10 -annotation ", label=annotation, lp="806,247.5", pos="e,858.83,189.49 788.07,305.63 782.19,291.83 772.83,263.75 783,243 795.93,216.6 825.3,201 850.99,192.06"]; Prepare_Unannotated_Sequences_asndisc_cpp -> Prepare_Unannotated_Sequences_asndisc_evaluate [_draw_="c 7 -#000000 B 13 1443.63 1029.93 1459.75 1028.26 1478.78 1026.4 1496 1025 1524.18 1022.7 1597.58 1029.39 1623 1017 1627.81 1014.66 \ 1627.05 1011.61 1631 1008 1632.37 1006.75 1633.83 1005.5 1635.33 1004.28 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1636.68 1006.33 1640.73 1000.12 1633.69 1002.45 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1642 1010.6 0 22 5 -input ", label=input, lp="1642,1012.5", pos="e,1641.9,999.2 1443.6,1029.9 1459.7,1028.3 1478.8,1026.4 1496,1025 1524.2,1022.7 1597.6,1029.4 1623,1017 1627.8,1014.7 1627,1011.6 \ 1631,1008 1632.4,1006.7 1633.8,1005.5 1635.3,1004.3"]; blast_hits_cache_data_split_dir -> genus_list_file2ints [_draw_="c 7 -#000000 B 4 3410.3 800.71 3408.6 795.47 3406.34 788.53 3404.29 782.24 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3406.66 781.6 3402.16 775.7 3402 783.12 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3418 785.6 0 22 5 -input ", label=input, lp="3418,787.5", pos="e,3401.7,774.27 3410.3,800.71 3408.6,795.47 3406.3,788.53 3404.3,782.24"]; blast_hits_cache_data_split_dir -> bacterial_annot_2nd_pass_blastp [_draw_="c 7 -#000000 B 13 3345.05 800.59 3327.78 794.42 3314 783.9 3314 766 3314 766 3314 766 3314 584 3314 572.03 3316.36 565.46 3307 558 \ 3296.99 550.03 3179.28 545.76 3066.91 543.5 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 3067.04 541.05 3060 543.36 3066.95 545.95 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3348 673.1 0 68 16 -blast_hits_cache ", label=blast_hits_cache, lp="3348,675", pos="e,3058.5,543.33 3345.1,800.59 3327.8,794.42 3314,783.9 3314,766 3314,766 3314,766 3314,584 3314,572.03 3316.4,565.46 3307,558 3297,\ 550.03 3179.3,545.76 3066.9,543.5"]; blast_hits_cache_data_split_dir -> bacterial_annot_1st_pass [_draw_="c 7 -#000000 B 10 3312.97 800.5 3170.98 788.72 2902.8 767.45 2674 755 2363.59 738.11 2285.64 741.74 1975 730 1966.67 729.69 1958.18 \ 729.36 1949.59 729.03 ", _hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1949.94 726.59 1942.85 728.77 1949.75 731.49 ", _ldraw_="F 8 9 -Helvetica c 7 -#000000 T 3012 763.1 0 68 16 -blast_hits_cache ", label=blast_hits_cache, lp="3012,765", pos="e,1941.3,728.71 3313,800.5 3171,788.72 2902.8,767.45 2674,755 2363.6,738.11 2285.6,741.74 1975,730 1966.7,729.69 1958.2,729.36 1949.6,\ 729.03"]; }