digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 503 993 503 993 0 ",
		bb="0,0,993,503",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 142 440 142 495 794 495 794 440 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 192 483 0 84 15 -Workflow Inputs ",
			bb="142,440,794,495",
			label="Workflow Inputs",
			lheight=0.15,
			lp="192,485.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		uniColl_asn_cache	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 305.5 448.5 305.5 467.5 412.5 467.5 412.5 448.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 359 455.5 0 91 17 -uniColl_asn_cache ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=uniColl_asn_cache,
			pos="359,458",
			rects="305.5,448.5,412.5,467.5",
			width=1.4861];
		go	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 674.5 448.5 674.5 467.5 703.5 467.5 703.5 448.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 689 455.5 0 13 2 -go ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=go,
			pos="689,458",
			rects="674.5,448.5,703.5,467.5",
			width=0.40278];
		all_prots	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 242.5 448.5 242.5 467.5 301.5 467.5 301.5 448.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 272 455.5 0 43 9 -all_prots ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=all_prots,
			pos="272,458",
			rects="242.5,448.5,301.5,467.5",
			width=0.81944];
		asn_cache	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 602 448.5 602 467.5 670 467.5 670 448.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 636 455.5 0 52 9 -asn_cache ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=asn_cache,
			pos="636,458",
			rects="602,448.5,670,467.5",
			width=0.94444];
		compartments	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 150 448.5 150 467.5 238 467.5 238 448.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 194 455.5 0 72 12 -compartments ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=compartments,
			pos="194,458",
			rects="150,448.5,238,467.5",
			width=1.2222];
		taxid	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 556.5 448.5 556.5 467.5 597.5 467.5 597.5 448.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 577 455.5 0 25 5 -taxid ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=taxid,
			pos="577,458",
			rects="556.5,448.5,597.5,467.5",
			width=0.56944];
		taxon_db	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 491.5 448.5 491.5 467.5 552.5 467.5 552.5 448.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 522 455.5 0 45 8 -taxon_db ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=taxon_db,
			pos="522,458",
			rects="491.5,448.5,552.5,467.5",
			width=0.84722];
		blastdb_dir	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 416.5 448.5 416.5 467.5 487.5 467.5 487.5 448.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 452 455.5 0 55 11 -blastdb_dir ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=blastdb_dir,
			pos="452,458",
			rects="416.5,448.5,487.5,467.5",
			width=0.98611];
		genomic_ids	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 708 448.5 708 467.5 786 467.5 786 448.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 747 455.5 0 62 11 -genomic_ids ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=genomic_ids,
			pos="747,458",
			rects="708,448.5,786,467.5",
			width=1.0833];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 608 8 608 63 716 63 716 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 662 15 0 92 16 -Workflow Outputs ",
			bb="608,8,716,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="662,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		align	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 641.5 35.5 641.5 54.5 682.5 54.5 682.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 662 42.5 0 25 5 -align ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=align,
			pos="662,45",
			rects="641.5,35.5,682.5,54.5",
			width=0.56944];
	}
	Filter_Short_Sequences	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 211 350.5 211 369.5 273 369.5 273 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 242 357.5 0 46 10 -seq_filter ",
		height=0.27778,
		label=seq_filter,
		pos="242,360",
		rects="211,350.5,273,369.5",
		width=0.86111];
	uniColl_asn_cache -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 10 332.62 448.5 322.77 445.53 311.44 442.36 301 440 258.83 430.49 231.45 450.65 207 415 197.64 401.35 210.84 385.41 \
223.62 374.4 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 225.06 376.39 228.97 370.09 221.98 372.58 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 229 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="229,405",
		pos="e,230.14,369.14 332.62,448.5 322.77,445.53 311.44,442.36 301,440 258.83,430.49 231.45,450.65 207,415 197.64,401.35 210.84,385.41 \
223.62,374.4"];
	Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 390 215.5 390 234.5 560 234.5 560 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 475 222.5 0 154 31 -Filter Full-Coverage Alignments ",
		height=0.27778,
		label="Filter Full-Coverage Alignments",
		pos="475,225",
		rects="390,215.5,560,234.5",
		width=2.3611];
	uniColl_asn_cache -> Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 B 13 332.31 448.52 322.52 445.58 311.32 442.43 301 440 239.47 425.53 205.68 459.7 161 415 147.96 401.95 137.95 348.47 \
148 333 177.71 287.24 331.51 252.31 417.19 236.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 417.6 238.46 424.03 234.76 416.69 233.65 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 186 335.6 0 76 17 -uniColl_asn_cache ",
		label=uniColl_asn_cache,
		lp="186,337.5",
		pos="e,425.51,234.48 332.31,448.52 322.52,445.58 311.32,442.43 301,440 239.47,425.53 205.68,459.7 161,415 147.96,401.95 137.95,348.47 \
148,333 177.71,287.24 331.51,252.31 417.19,236.05"];
	Align_Short_Proteins	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 239.5 305.5 239.5 324.5 376.5 324.5 376.5 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 308 312.5 0 121 23 -Seed Protein Alignments ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Seed Protein Alignments",
		pos="308,315",
		rects="239.5,305.5,376.5,324.5",
		width=1.9028];
	uniColl_asn_cache -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 10 330.74 448.58 305.04 440.28 269.96 427.12 262 415 257.12 407.57 259.68 403.58 262 395 265.6 381.68 285.54 350 \
297.95 331.05 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 299.8 332.7 301.61 325.51 295.71 330 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 308 380.6 0 76 17 -uniColl_asn_cache ",
		label=uniColl_asn_cache,
		lp="308,382.5",
		pos="e,302.45,324.25 330.74,448.58 305.04,440.28 269.96,427.12 262,415 257.12,407.57 259.68,403.58 262,395 265.6,381.68 285.54,350 297.95,\
331.05"];
	Get_Protein_FASTA	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 563.5 350.5 563.5 369.5 620.5 369.5 620.5 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 592 357.5 0 41 8 -getfasta ",
		height=0.27778,
		label=getfasta,
		pos="592,360",
		rects="563.5,350.5,620.5,369.5",
		width=0.79167];
	uniColl_asn_cache -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 13 383.27 448.58 393.55 445.35 405.73 441.98 417 440 473.14 430.14 490.91 449.97 545 432 545.41 431.86 570.73 415.34 \
571 415 579.8 404.15 585.23 389.18 588.36 377.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 590.74 378.35 590.03 370.97 585.98 377.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 604 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="604,405",
		pos="e,590.4,369.5 383.27,448.58 393.55,445.35 405.73,441.98 417,440 473.14,430.14 490.91,449.97 545,432 545.41,431.86 570.73,415.34 \
571,415 579.8,404.15 585.23,389.18 588.36,377.75"];
	Remap_cross_origin_alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 636.5 215.5 636.5 234.5 741.5 234.5 741.5 215.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 689 222.5 0 89 18 -cross_origin_fasta ",
		height=0.27778,
		label=cross_origin_fasta,
		pos="689,225",
		rects="636.5,215.5,741.5,234.5",
		width=1.4583];
	uniColl_asn_cache -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 25 382.96 448.55 393.3 445.28 405.61 441.88 417 440 458.7 433.12 566.55 444.24 607 432 620.93 427.78 623.4 423.8 \
635 415 658.29 397.32 671.38 396.83 683 370 686.53 361.84 686.85 358.01 683 350 680.53 344.87 675.47 347.13 673 342 668.71 333.08 \
669.06 366.49 682 280 683.86 267.56 685.68 253.47 686.99 242.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 689.42 243.18 687.83 235.93 684.55 242.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 695 335.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="695,337.5",
		pos="e,688.01,234.43 382.96,448.55 393.3,445.28 405.61,441.88 417,440 458.7,433.12 566.55,444.24 607,432 620.93,427.78 623.4,423.8 635,\
415 658.29,397.32 671.38,396.83 683,370 686.53,361.84 686.85,358.01 683,350 680.53,344.87 675.47,347.13 673,342 668.71,333.08 669.06,\
366.49 682,280 683.86,267.56 685.68,253.47 686.99,242.8"];
	Filter_Protein_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 593.5 80.5 593.5 99.5 730.5 99.5 730.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 662 87.5 0 121 25 -Filter Protein Alignments ",
		height=0.27778,
		label="Filter Protein Alignments",
		pos="662,90",
		rects="593.5,80.5,730.5,99.5",
		width=1.9028];
	uniColl_asn_cache -> Filter_Protein_Alignments	[_draw_="c 7 -#000000 B 19 334.74 448.57 324.45 445.34 312.27 441.97 301 440 272.27 434.98 197.33 442.19 170 432 152.18 425.35 136 425.02 \
136 406 136 406 136 406 136 336.5 136 274.89 102.05 244.9 142 198 198.44 131.75 454.6 105.01 585.09 95.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 585.18 98 591.99 95.06 584.84 93.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 166 268.1 0 76 17 -uniColl_asn_cache ",
		label=uniColl_asn_cache,
		lp="166,270",
		pos="e,593.5,94.95 334.74,448.57 324.45,445.34 312.27,441.97 301,440 272.27,434.98 197.33,442.19 170,432 152.18,425.35 136,425.02 136,\
406 136,406 136,406 136,336.5 136,274.89 102.05,244.9 142,198 198.44,131.75 454.6,105.01 585.09,95.548"];
	Convert_PAF_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 626 260.5 626 279.5 682 279.5 682 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 654 267.5 0 40 7 -paf2asn ",
		height=0.27778,
		label=paf2asn,
		pos="654,270",
		rects="626,260.5,682,279.5",
		width=0.77778];
	uniColl_asn_cache -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 19 383.25 448.51 393.53 445.27 405.72 441.91 417 440 463.34 432.16 595.49 449.87 627 415 646.88 393 626.87 375.5 \
642 350 644.73 345.4 648.39 346.67 651 342 654.74 335.3 653.33 332.64 654 325 655.09 312.58 655.05 298.48 654.75 287.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 657.21 287.86 654.51 280.95 652.31 288.03 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 664 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="664,360",
		pos="e,654.45,279.44 383.25,448.51 393.53,445.27 405.72,441.91 417,440 463.34,432.16 595.49,449.87 627,415 646.88,393 626.87,375.5 642,\
350 644.73,345.4 648.39,346.67 651,342 654.74,335.3 653.33,332.64 654,325 655.09,312.58 655.05,298.48 654.75,287.81"];
	Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 314 260.5 314 279.5 400 279.5 400 260.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 357 267.5 0 70 13 -align_sort_ma ",
		height=0.27778,
		label=align_sort_ma,
		pos="357,270",
		rects="314,260.5,400,279.5",
		width=1.1944];
	uniColl_asn_cache -> Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 B 25 334.14 448.56 323.97 445.41 312.03 442.1 301 440 262.42 432.66 251.31 440.66 213 432 210.34 431.4 168.61 417.2 \
167 415 155.2 398.83 165.44 390.01 165 370 164.8 361.11 159.14 356.69 165 350 182.72 329.76 203.93 358.72 225 342 238.77 331.07 \
226.07 316.92 239 305 257.15 288.27 283.02 279.72 305.91 275.37 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 306.21 277.8 312.7 274.2 305.39 272.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 187 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="187,360",
		pos="e,314.19,273.95 334.14,448.56 323.97,445.41 312.03,442.1 301,440 262.42,432.66 251.31,440.66 213,432 210.34,431.4 168.61,417.2 167,\
415 155.2,398.83 165.44,390.01 165,370 164.8,361.11 159.14,356.69 165,350 182.72,329.76 203.93,358.72 225,342 238.77,331.07 226.07,\
316.92 239,305 257.15,288.27 283.02,279.72 305.91,275.37"];
	all_prots -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 10 255.91 448.52 250.3 445.68 243.93 442.58 238 440 208.86 427.32 189.12 441.11 171 415 158.3 396.71 182.25 381.94 \
205.7 372.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 206.49 374.81 212.16 370.04 204.75 370.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 185 403.1 0 28 6 -seqids ",
		label=seqids,
		lp="185,405",
		pos="e,213.57,369.5 255.91,448.52 250.3,445.68 243.93,442.58 238,440 208.86,427.32 189.12,441.11 171,415 158.3,396.71 182.25,381.94 205.7,\
372.49"];
	all_prots -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 13 284.95 448.64 290.83 445.3 298.02 441.82 305 440 329.63 433.57 512.74 446.02 534 432 548.96 422.14 539.37 409.42 \
550 395 550.98 393.67 563.58 383.52 574.73 374.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 576.22 376.6 580.18 370.33 573.17 372.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 560 403.1 0 20 6 -gilist ",
		label=gilist,
		lp="560,405",
		pos="e,581.37,369.39 284.95,448.64 290.83,445.3 298.02,441.82 305,440 329.63,433.57 512.74,446.02 534,432 548.96,422.14 539.37,409.42 \
550,395 550.98,393.67 563.58,383.52 574.73,374.65"];
	Filter_Protein_Compartments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 550 170.5 550 189.5 618 189.5 618 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 584 177.5 0 52 12 -align_filter ",
		height=0.27778,
		label=align_filter,
		pos="584,180",
		rects="550,170.5,618,189.5",
		width=0.94444];
	all_prots -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 13 257.88 448.62 251.93 445.45 244.81 442.09 238 440 201.17 428.68 68 444.53 68 406 68 406 68 406 68 224 68 200.3 \
418.33 186.46 541.66 182.32 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 541.72 184.77 548.63 182.09 541.55 179.88 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 98.5 313.1 0 61 15 -query_allowlist ",
		label=query_allowlist,
		lp="98.5,315",
		pos="e,550.14,182.04 257.88,448.62 251.93,445.45 244.81,442.09 238,440 201.17,428.68 68,444.53 68,406 68,406 68,406 68,224 68,200.3 418.33,\
186.46 541.66,182.32"];
	asn_cache -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 16 618.43 448.51 612.07 445.61 604.79 442.47 598 440 585.84 435.57 582.34 435.9 570 432 558.34 428.32 556.03 425.2 \
544 423 528.91 420.24 280.87 423.35 268 415 261.14 410.55 252.9 391.21 247.57 376.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 249.99 376.45 245.31 370.7 245.39 378.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 290 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="290,405",
		pos="e,244.79,369.28 618.43,448.51 612.07,445.61 604.79,442.47 598,440 585.84,435.57 582.34,435.9 570,432 558.34,428.32 556.03,425.2 \
544,423 528.91,420.24 280.87,423.35 268,415 261.14,410.55 252.9,391.21 247.57,376.94"];
	asn_cache -> Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 B 22 653.55 448.64 671.79 439.56 698.42 425 704 415 708.33 407.24 706.64 403.49 704 395 696.79 371.81 694.06 362.09 \
673 350 652.32 338.13 587.37 352.57 566 342 561.2 339.63 562.47 335.95 558 333 548.61 326.81 542.76 332.05 534 325 519.57 313.39 \
495.17 266.82 482.75 241.91 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 485 240.93 479.71 235.73 480.61 243.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 588 335.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="588,337.5",
		pos="e,479.04,234.38 653.55,448.64 671.79,439.56 698.42,425 704,415 708.33,407.24 706.64,403.49 704,395 696.79,371.81 694.06,362.09 673,\
350 652.32,338.13 587.37,352.57 566,342 561.2,339.63 562.47,335.95 558,333 548.61,326.81 542.76,332.05 534,325 519.57,313.39 495.17,\
266.82 482.75,241.91"];
	asn_cache -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 22 623.62 448.53 612.54 440.61 596.2 428.06 584 415 576.6 407.07 579.21 400.73 570 395 550.14 382.65 539.55 396.06 \
518 387 511.85 384.42 512.25 380.31 506 378 479.68 368.29 405.71 381.24 380 370 368.19 364.84 369.07 358.05 359 350 349.56 342.45 \
338.45 334.9 329.01 328.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 330.38 326.81 323.15 325.14 327.76 330.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 540 380.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="540,382.5",
		pos="e,321.87,324.33 623.62,448.53 612.54,440.61 596.2,428.06 584,415 576.6,407.07 579.21,400.73 570,395 550.14,382.65 539.55,396.06 \
518,387 511.85,384.42 512.25,380.31 506,378 479.68,368.29 405.71,381.24 380,370 368.19,364.84 369.07,358.05 359,350 349.56,342.45 \
338.45,334.9 329.01,328.84"];
	Sort_Protein_Alignments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 629.5 125.5 629.5 144.5 694.5 144.5 694.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 662 132.5 0 49 10 -align_sort ",
		height=0.27778,
		label=align_sort,
		pos="662,135",
		rects="629.5,125.5,694.5,144.5",
		width=0.90278];
	asn_cache -> Sort_Protein_Alignments	[_draw_="c 7 -#000000 B 13 651.44 448.54 658.17 445.27 666.27 441.87 674 440 722.73 428.23 897 456.13 897 406 897 406 897 406 897 179 897 \
139.92 769.67 135.07 702.46 135.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 702.68 132.79 695.7 135.28 702.71 137.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 919 290.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="919,292.5",
		pos="e,694.18,135.28 651.44,448.54 658.17,445.27 666.27,441.87 674,440 722.73,428.23 897,456.13 897,406 897,406 897,406 897,179 897,139.92 \
769.67,135.07 702.46,135.24"];
	asn_cache -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 7 649.59 448.57 657.84 442.28 666.22 433.05 663 423 655.83 400.64 634.39 383.86 616.93 373.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 618.36 371.43 611.06 370.11 615.94 375.7 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 681 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="681,405",
		pos="e,609.74,369.36 649.59,448.57 657.84,442.28 666.22,433.05 663,423 655.83,400.64 634.39,383.86 616.93,373.44"];
	asn_cache -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 22 651.46 448.63 658.2 445.37 666.3 441.96 674 440 718.5 428.68 734.15 448.51 777 432 795.97 424.69 843.41 384.61 \
850 370 853.66 361.9 854.19 357.84 850 350 846.98 344.35 841.58 347.32 838 342 824.33 321.67 842.3 307.13 827 288 805.55 261.19 \
770.03 245.6 740.4 236.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 741.07 234.4 733.67 234.85 739.74 239.11 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 860 335.6 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="860,337.5",
		pos="e,732.21,234.43 651.46,448.63 658.2,445.37 666.3,441.96 674,440 718.5,428.68 734.15,448.51 777,432 795.97,424.69 843.41,384.61 850,\
370 853.66,361.9 854.19,357.84 850,350 846.98,344.35 841.58,347.32 838,342 824.33,321.67 842.3,307.13 827,288 805.55,261.19 770.03,\
245.6 740.4,236.75"];
	asn_cache -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 25 651.46 448.6 658.19 445.34 666.29 441.93 674 440 745.95 421.98 782.06 462.53 839 415 867.4 391.29 869.82 377.84 \
879 342 879.99 338.12 881.44 336.17 879 333 870.59 322.06 857.92 335.53 849 325 839.91 314.27 846 307.56 846 293.5 846 293.5 846 \
293.5 846 224 846 202 700.32 188.9 626.22 183.66 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 626.65 181.23 619.49 183.19 626.31 186.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 871 313.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="871,315",
		pos="e,617.98,183.09 651.46,448.6 658.19,445.34 666.29,441.93 674,440 745.95,421.98 782.06,462.53 839,415 867.4,391.29 869.82,377.84 \
879,342 879.99,338.12 881.44,336.17 879,333 870.59,322.06 857.92,335.53 849,325 839.91,314.27 846,307.56 846,293.5 846,293.5 846,\
293.5 846,224 846,202 700.32,188.9 626.22,183.66"];
	asn_cache -> Filter_Protein_Alignments	[_draw_="c 7 -#000000 B 16 651.06 448.66 657.86 445.33 666.12 441.84 674 440 762.78 419.23 789.59 449.88 879 432 911.54 425.49 949 439.19 \
949 406 949 406 949 406 949 134 949 112.7 823.75 100.78 738.73 95.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 739.03 92.7 731.89 94.69 738.72 97.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 971 268.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="971,270",
		pos="e,730.38,94.593 651.06,448.66 657.86,445.33 666.12,441.84 674,440 762.78,419.23 789.59,449.88 879,432 911.54,425.49 949,439.19 949,\
406 949,406 949,406 949,134 949,112.7 823.75,100.78 738.73,95.136"];
	asn_cache -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 16 651.89 448.67 658.56 445.5 666.49 442.14 674 440 724.72 425.54 752.87 452.45 790 415 804.66 400.22 800.08 390.61 \
803 370 805.33 353.57 809.01 345.42 798 333 782.87 315.93 725.85 294.64 688.26 281.97 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 689.4 279.77 681.99 279.88 687.85 284.42 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 827 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="827,360",
		pos="e,680.55,279.4 651.89,448.67 658.56,445.5 666.49,442.14 674,440 724.72,425.54 752.87,452.45 790,415 804.66,400.22 800.08,390.61 \
803,370 805.33,353.57 809.01,345.42 798,333 782.87,315.93 725.85,294.64 688.26,281.97"];
	Get_Genomic_FASTA	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 697.5 350.5 697.5 369.5 802.5 369.5 802.5 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 750 357.5 0 89 18 -cross_origin_fasta ",
		height=0.27778,
		label=cross_origin_fasta,
		pos="750,360",
		rects="697.5,350.5,802.5,369.5",
		width=1.4583];
	asn_cache -> Get_Genomic_FASTA	[_draw_="c 7 -#000000 B 10 652.28 448.57 658.88 445.47 666.65 442.18 674 440 696 433.48 707.36 446.67 725 432 741.27 418.46 746.96 393.62 \
748.95 377.21 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 751.35 377.79 749.57 370.59 746.47 377.33 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 767 403.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="767,405",
		pos="e,749.71,369.08 652.28,448.57 658.88,445.47 666.65,442.18 674,440 696,433.48 707.36,446.67 725,432 741.27,418.46 746.96,393.62 748.95,\
377.21"];
	asn_cache -> Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 B 16 637.45 448.57 639.2 435.38 640.42 409.85 627 395 606.11 371.89 589.82 382.52 559 378 540.07 375.22 401.23 382.79 \
387 370 365.26 350.46 386.81 332.53 377 305 374.73 298.61 371.22 292.08 367.77 286.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 369.93 285.3 364.06 280.76 365.82 287.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 409 358.1 0 44 9 -asn_cache ",
		label=asn_cache,
		lp="409,360",
		pos="e,363.23,279.49 637.45,448.57 639.2,435.38 640.42,409.85 627,395 606.11,371.89 589.82,382.52 559,378 540.07,375.22 401.23,382.79 \
387,370 365.26,350.46 386.81,332.53 377,305 374.73,298.61 371.22,292.08 367.77,286.47"];
	compartments -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 16 150.46 454.27 93.26 449.47 0 436.91 0 406 0 406 0 406 0 336.5 0 275.47 13.45 249.2 64 215 93.39 195.12 106.8 202.48 \
142 198 218.46 188.27 446.77 183.35 541.78 181.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 541.82 184.12 548.77 181.55 541.73 179.23 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 32 313.1 0 60 12 -compartments ",
		label=compartments,
		lp="32,315",
		pos="e,550.28,181.53 150.46,454.27 93.265,449.47 0,436.91 0,406 0,406 0,406 0,336.5 0,275.47 13.451,249.2 64,215 93.386,195.12 106.8,\
202.48 142,198 218.46,188.27 446.77,183.35 541.78,181.68"];
	Extract_Proteins_From_Compartments	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 314 395.5 314 414.5 422 414.5 422 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 368 402.5 0 92 17 -compart_annot2all ",
		height=0.27778,
		label=compart_annot2all,
		pos="368,405",
		rects="314,395.5,422,414.5",
		width=1.5];
	compartments -> Extract_Proteins_From_Compartments	[_draw_="c 7 -#000000 B 7 216.83 448.51 224.76 445.67 233.73 442.58 242 440 269.7 431.37 301.2 422.87 325.78 416.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 326.2 418.95 332.37 414.84 324.98 414.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 313.5 425.6 0 25 6 -aligns ",
		label=aligns,
		lp="313.5,427.5",
		pos="e,333.84,414.46 216.83,448.51 224.76,445.67 233.73,442.58 242,440 269.7,431.37 301.2,422.87 325.78,416.53"];
	Compute_Gencode	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 436 395.5 436 414.5 542 414.5 542 395.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 489 402.5 0 90 15 -compute_gencode ",
		height=0.27778,
		label=compute_gencode,
		pos="489,405",
		rects="436,395.5,542,414.5",
		width=1.4722];
	taxid -> Compute_Gencode	[_draw_="c 7 -#000000 B 7 570.84 448.56 564.8 440.87 554.94 429.71 544 423 540.66 420.95 537.06 419.13 533.34 417.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 534.45 415.32 527.03 415.05 532.66 419.88 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 565.5 425.6 0 21 5 -taxid ",
		label=taxid,
		lp="565.5,427.5",
		pos="e,525.63,414.49 570.84,448.56 564.8,440.87 554.94,429.71 544,423 540.66,420.95 537.06,419.13 533.34,417.52"];
	taxon_db -> Compute_Gencode	[_draw_="c 7 -#000000 B 4 516.55 448.58 511.75 441.15 504.63 430.15 498.83 421.19 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 501.03 420.08 495.17 415.54 496.92 422.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 524 425.6 0 38 8 -taxon_db ",
		label=taxon_db,
		lp="524,427.5",
		pos="e,494.35,414.26 516.55,448.58 511.75,441.15 504.63,430.15 498.83,421.19"];
	blastdb_dir -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 16 448.92 448.74 443.16 433.69 430.57 402.63 422 395 413.92 387.8 408.17 392.75 399 387 394.21 383.99 394.75 381.07 \
390 378 381.62 372.57 377.54 375.17 369 370 350.83 359 332.98 342.32 321.34 330.41 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 323.19 328.81 316.59 325.45 319.65 332.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 422 380.6 0 46 11 -blastdb_dir ",
		label=blastdb_dir,
		lp="422,382.5",
		pos="e,315.54,324.35 448.92,448.74 443.16,433.69 430.57,402.63 422,395 413.92,387.8 408.17,392.75 399,387 394.21,383.99 394.75,381.07 \
390,378 381.62,372.57 377.54,375.17 369,370 350.83,359 332.98,342.32 321.34,330.41"];
	genomic_ids -> Get_Genomic_FASTA	[_draw_="c 7 -#000000 B 7 785.74 451.4 797.03 447.77 808.16 441.8 815 432 830.69 409.52 799.58 386.7 775.21 373.2 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 776.59 371.16 769.26 370.03 774.29 375.49 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 828 403.1 0 20 6 -gilist ",
		label=gilist,
		lp="828,405",
		pos="e,767.93,369.32 785.74,451.4 797.03,447.77 808.16,441.8 815,432 830.69,409.52 799.58,386.7 775.21,373.2"];
	Filter_Short_Sequences -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 7 241.83 350.72 242.15 345.03 243.53 337.7 248 333 249.47 331.46 251.07 330.05 252.77 328.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 253.82 331 258.47 325.22 251.23 326.84 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 262 335.6 0 28 6 -seqids ",
		label=seqids,
		lp="262,337.5",
		pos="e,259.76,324.42 241.83,350.72 242.15,345.03 243.53,337.7 248,333 249.47,331.46 251.07,330.05 252.77,328.77"];
	Filter_Full_Coverage_Alignments -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 4 496.53 215.5 513.26 208.91 536.61 199.7 554.98 192.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 555.49 194.88 561.1 190.03 553.69 190.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 550 200.6 0 22 5 -input ",
		label=input,
		lp="550,202.5",
		pos="e,562.51,189.48 496.53,215.5 513.26,208.91 536.61,199.7 554.98,192.45"];
	Align_Short_Proteins -> Sort_Short_Protein_Alignments	[_draw_="c 7 -#000000 B 4 317.45 305.71 324.23 299.76 333.52 291.61 341.39 284.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 342.8 286.72 346.44 280.26 339.57 283.04 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 347 290.6 0 22 5 -input ",
		label=input,
		lp="347,292.5",
		pos="e,347.58,279.27 317.45,305.71 324.23,299.76 333.52,291.61 341.39,284.7"];
	Compute_Gencode_int	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 432.5 350.5 432.5 369.5 559.5 369.5 559.5 350.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 496 357.5 0 111 19 -Compute_Gencode_int ",
		height=0.27778,
		label=Compute_Gencode_int,
		pos="496,360",
		rects="432.5,350.5,559.5,369.5",
		width=1.7639];
	Compute_Gencode_int -> Align_Short_Proteins	[_draw_="c 7 -#000000 B 4 458.86 350.5 428.47 343.56 385.39 333.7 353.04 326.3 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 353.91 323.99 346.54 324.82 352.82 328.76 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 443.5 335.6 0 51 10 -db_gencode ",
		label=db_gencode,
		lp="443.5,337.5",
		pos="e,345.07,324.48 458.86,350.5 428.47,343.56 385.39,333.7 353.04,326.3"];
	Run_Miniprot_slow	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 596 305.5 596 324.5 654 324.5 654 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 625 312.5 0 42 8 -miniprot ",
		height=0.27778,
		label=miniprot,
		pos="625,315",
		rects="596,305.5,654,324.5",
		width=0.80556];
	Compute_Gencode_int -> Run_Miniprot_slow	[_draw_="c 7 -#000000 B 10 523.44 350.62 530.01 348.2 536.89 345.3 543 342 548.87 338.83 548.94 335.77 555 333 568.03 327.05 573.85 328.33 \
587.99 325.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 588.42 328.13 594.75 324.26 587.39 323.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 558 335.6 0 6 1 -T ",
		label=T,
		lp="558,337.5",
		pos="e,596.23,323.94 523.44,350.62 530.01,348.2 536.89,345.3 543,342 548.87,338.83 548.94,335.77 555,333 568.03,327.05 573.85,328.33 \
587.99,325.72"];
	Run_Miniprot_fast	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 534 305.5 534 324.5 592 324.5 592 305.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 563 312.5 0 42 8 -miniprot ",
		height=0.27778,
		label=miniprot,
		pos="563,315",
		rects="534,305.5,592,324.5",
		width=0.80556];
	Compute_Gencode_int -> Run_Miniprot_fast	[_draw_="c 7 -#000000 B 7 495.82 350.71 496.14 345.02 497.52 337.69 502 333 508.4 326.31 517.19 322.18 526.1 319.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 526.53 322.07 532.79 318.09 525.42 317.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 505 335.6 0 6 1 -T ",
		label=T,
		lp="505,337.5",
		pos="e,534.26,317.75 495.82,350.71 496.14,345.02 497.52,337.69 502,333 508.4,326.31 517.19,322.18 526.1,319.65"];
	Compute_Gencode -> Compute_Gencode_int	[_draw_="c 7 -#000000 B 7 487.03 395.69 486.14 390.53 485.56 383.8 487 378 487.09 377.63 487.19 377.25 487.31 376.88 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 489.44 378.11 489.96 370.71 484.94 376.17 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 498 380.6 0 22 5 -input ",
		label=input,
		lp="498,382.5",
		pos="e,490.56,369.32 487.03,395.69 486.14,390.53 485.56,383.8 487,378 487.09,377.63 487.19,377.25 487.31,376.88"];
	Sort_Protein_Alignments -> Filter_Protein_Alignments	[_draw_="c 7 -#000000 B 4 662 125.71 662 120.59 662 113.85 662 107.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 664.45 107.78 662 100.78 659.55 107.78 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 674.5 110.6 0 25 7 -file_in ",
		label=file_in,
		lp="674.5,112.5",
		pos="e,662,99.265 662,125.71 662,120.59 662,113.85 662,107.67"];
	Run_Miniprot_slow -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 4 630.59 305.71 634.36 300.12 639.45 292.58 643.91 285.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 645.7 287.69 647.58 280.52 641.63 284.95 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 649 290.6 0 14 3 -paf ",
		label=paf,
		lp="649,292.5",
		pos="e,648.43,279.27 630.59,305.71 634.36,300.12 639.45,292.58 643.91,285.96"];
	Get_Protein_FASTA -> Run_Miniprot_slow	[_draw_="c 7 -#000000 B 7 602.69 350.6 605.59 348.02 608.59 345.06 611 342 613.49 338.83 615.78 335.16 617.74 331.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 619.84 332.87 620.82 325.52 615.47 330.66 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 633 335.6 0 34 8 -proteins ",
		label=proteins,
		lp="633,337.5",
		pos="e,621.5,324.17 602.69,350.6 605.59,348.02 608.59,345.06 611,342 613.49,338.83 615.78,335.16 617.74,331.59"];
	Get_Protein_FASTA -> Run_Miniprot_fast	[_draw_="c 7 -#000000 B 10 563.77 350.88 562.5 350.57 561.24 350.28 560 350 549.45 347.64 518.99 350.25 512 342 504.77 333.46 513.77 327.4 \
526.12 323.29 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 526.63 325.7 532.67 321.4 525.27 320.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 529 335.6 0 34 8 -proteins ",
		label=proteins,
		lp="529,337.5",
		pos="e,534.13,320.98 563.77,350.88 562.5,350.57 561.24,350.28 560,350 549.45,347.64 518.99,350.25 512,342 504.77,333.46 513.77,327.4 \
526.12,323.29"];
	Remap_cross_origin_alignments -> Filter_Protein_Compartments	[_draw_="c 7 -#000000 B 4 668.26 215.5 652.29 208.97 630.06 199.86 612.43 192.64 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 613.51 190.44 606.1 190.05 611.65 194.97 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 656 200.6 0 22 5 -input ",
		label=input,
		lp="656,202.5",
		pos="e,604.7,189.48 668.26,215.5 652.29,208.97 630.06,199.86 612.43,192.64"];
	Filter_Protein_Compartments -> Sort_Protein_Alignments	[_draw_="c 7 -#000000 B 4 599.41 170.5 610.84 164.2 626.6 155.51 639.45 148.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 640.35 150.73 645.3 145.21 637.98 146.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 640 155.6 0 22 5 -input ",
		label=input,
		lp="640,157.5",
		pos="e,646.62,144.48 599.41,170.5 610.84,164.2 626.6,155.51 639.45,148.43"];
	Run_Miniprot_fast -> Convert_PAF_Alignments	[_draw_="c 7 -#000000 B 4 580.98 305.5 594.56 299.09 613.39 290.19 628.53 283.04 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 629.41 285.33 634.69 280.12 627.31 280.9 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 623 290.6 0 14 3 -paf ",
		label=paf,
		lp="623,292.5",
		pos="e,636.06,279.48 580.98,305.5 594.56,299.09 613.39,290.19 628.53,283.04"];
	Filter_Protein_Alignments -> align	[_draw_="c 7 -#000000 B 4 662 80.71 662 75.59 662 68.85 662 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 664.45 62.78 662 55.78 659.55 62.78 ",
		pos="e,662,54.265 662,80.709 662,75.593 662,68.848 662,62.666"];
	Convert_PAF_Alignments -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 7 655.84 260.61 657.35 255.17 659.91 248.15 664 243 664.9 241.87 665.89 240.78 666.95 239.75 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 668.46 241.68 672.33 235.35 665.36 237.89 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 674.5 245.6 0 21 5 -align ",
		label=align,
		lp="674.5,247.5",
		pos="e,673.5,234.39 655.84,260.61 657.35,255.17 659.91,248.15 664,243 664.9,241.87 665.89,240.78 666.95,239.75"];
	Get_Genomic_FASTA -> Run_Miniprot_slow	[_draw_="c 7 -#000000 B 10 757.58 350.95 761.9 345.37 765.62 338.07 761 333 754.54 325.91 684.51 326.3 675 325 670.79 324.43 666.4 323.75 \
662.04 323.03 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 662.56 320.63 655.24 321.86 661.73 325.46 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 780 335.6 0 34 6 -genome ",
		label=genome,
		lp="780,337.5",
		pos="e,653.75,321.61 757.58,350.95 761.9,345.37 765.62,338.07 761,333 754.54,325.91 684.51,326.3 675,325 670.79,324.43 666.4,323.75 662.04,\
323.03"];
	Get_Genomic_FASTA -> Remap_cross_origin_alignments	[_draw_="c 7 -#000000 B 10 788.1 350.52 796.21 346.62 801.45 341.01 798 333 788.81 311.63 776.67 313.23 760 297 740.07 277.6 717.4 254.8 \
703.15 240.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 704.96 238.72 698.3 235.46 701.47 242.16 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 795 290.6 0 70 16 -delta_seqs_input ",
		label=delta_seqs_input,
		lp="795,292.5",
		pos="e,697.24,234.38 788.1,350.52 796.21,346.62 801.45,341.01 798,333 788.81,311.63 776.67,313.23 760,297 740.07,277.6 717.4,254.8 703.15,\
240.38"];
	Get_Genomic_FASTA -> Run_Miniprot_fast	[_draw_="c 7 -#000000 B 10 736.88 350.52 733.23 347.94 729.35 345 726 342 722.01 338.43 722.81 335.35 718 333 695.59 322.04 634.1 328.24 \
600.12 325.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 600.47 322.82 593.22 324.38 599.87 327.68 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 743 335.6 0 34 6 -genome ",
		label=genome,
		lp="743,337.5",
		pos="e,591.72,324.2 736.88,350.52 733.23,347.94 729.35,345 726,342 722.01,338.43 722.81,335.35 718,333 695.59,322.04 634.1,328.24 600.12,\
325.24"];
	Extract_Proteins_From_Compartments -> Filter_Short_Sequences	[_draw_="c 7 -#000000 B 7 365.68 395.62 363.61 389.73 359.95 382.19 354 378 342.45 369.86 308.6 365.51 281.11 363.25 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 281.49 360.82 274.33 362.73 281.12 365.71 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 375 380.6 0 28 6 -seqids ",
		label=seqids,
		lp="375,382.5",
		pos="e,272.82,362.61 365.68,395.62 363.61,389.73 359.95,382.19 354,378 342.45,369.86 308.6,365.51 281.11,363.25"];
	Extract_Proteins_From_Compartments -> Get_Protein_FASTA	[_draw_="c 7 -#000000 B 10 415.08 395.55 425.39 393.2 436.16 390.35 446 387 454.84 383.99 455.98 380.43 465 378 503.36 367.67 516.65 376.31 \
555.64 370.59 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 555.8 373.05 562.31 369.49 555 368.21 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 475 380.6 0 20 6 -gilist ",
		label=gilist,
		lp="475,382.5",
		pos="e,563.8,369.25 415.08,395.55 425.39,393.2 436.16,390.35 446,387 454.84,383.99 455.98,380.43 465,378 503.36,367.67 516.65,376.31 \
555.64,370.59"];
	Sort_Short_Protein_Alignments -> Filter_Full_Coverage_Alignments	[_draw_="c 7 -#000000 B 4 380.31 260.5 398.49 253.88 423.92 244.61 443.85 237.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 444.58 239.69 450.31 235 442.9 235.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 453.5 245.6 0 55 12 -sorted_seeds ",
		label=sorted_seeds,
		lp="453.5,247.5",
		pos="e,451.74,234.48 380.31,260.5 398.49,253.88 423.92,244.61 443.85,237.35"];
}