digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 331.3 233 331.3 0 ",
		bb="0,0,331.3,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
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	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
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	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 39.3 170 39.3 225 319.3 225 319.3 170 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 89.3 213 0 84 15 -Workflow Inputs ",
			bb="39.3,170,319.3,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="89.3,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
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		sites_maf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 47.8 178.5 47.8 197.5 112.8 197.5 112.8 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 80.3 185.5 0 49 9 -sites_maf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=sites_maf,
			pos="80.3,188",
			rects="47.8,178.5,112.8,197.5",
			width=0.90278];
		ref_fasta	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 117.3 178.5 117.3 197.5 177.3 197.5 177.3 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 147.3 185.5 0 44 9 -ref_fasta ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=ref_fasta,
			pos="147.3,188",
			rects="117.3,178.5,177.3,197.5",
			width=0.83333];
		maf_files	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 181.3 178.5 181.3 197.5 243.3 197.5 243.3 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 212.3 185.5 0 46 9 -maf_files ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=maf_files,
			pos="212.3,188",
			rects="181.3,178.5,243.3,197.5",
			width=0.86111];
		bam_files	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 247.3 178.5 247.3 197.5 311.3 197.5 311.3 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 279.3 185.5 0 48 9 -bam_files ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bam_files,
			pos="279.3,188",
			rects="247.3,178.5,311.3,197.5",
			width=0.88889];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 126.3 8 126.3 63 234.3 63 234.3 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 180.3 15 0 92 16 -Workflow Outputs ",
			bb="126.3,8,234.3,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="180.3,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		output_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 146.3 35.5 146.3 54.5 214.3 54.5 214.3 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 180.3 42.5 0 52 11 -output_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=output_file,
			pos="180.3,45",
			rects="146.3,35.5,214.3,54.5",
			width=0.94444];
	}
	convert_sites_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 46.8 125.5 46.8 144.5 163.8 144.5 163.8 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 105.3 132.5 0 101 20 -convert_sites_to_vcf ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label=convert_sites_to_vcf,
		pos="105.3,135",
		rects="46.8,125.5,163.8,144.5",
		width=1.625];
	sites_maf -> convert_sites_to_vcf	[_draw_="c 7 -#000000 B 7 78.56 178.64 77.5 171.41 77.06 160.91 81.3 153 81.82 152.04 82.41 151.12 83.07 150.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 84.75 152.03 88.03 145.38 81.31 148.53 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 97.8 155.6 0 33 8 -maf_file ",
		label=maf_file,
		lp="97.8,157.5",
		pos="e,89.108,144.32 78.562,178.64 77.503,171.41 77.06,160.91 81.3,153 81.816,152.04 82.412,151.12 83.073,150.24"];
	convert_mafs_to_vcf	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 167.8 125.5 167.8 144.5 286.8 144.5 286.8 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 227.3 132.5 0 103 19 -convert_mafs_to_vcf ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label=convert_mafs_to_vcf,
		pos="227.3,135",
		rects="167.8,125.5,286.8,144.5",
		width=1.6528];
	ref_fasta -> convert_mafs_to_vcf	[_draw_="c 7 -#000000 B 7 153.79 178.7 160.11 171.11 170.33 160.02 181.3 153 184.37 151.04 187.69 149.25 191.11 147.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 191.8 150.02 197.26 145 189.86 145.51 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 199.8 155.6 0 37 9 -ref_fasta ",
		label=ref_fasta,
		lp="199.8,157.5",
		pos="e,198.65,144.41 153.79,178.7 160.11,171.11 170.33,160.02 181.3,153 184.37,151.04 187.69,149.25 191.11,147.65"];
	ref_fasta -> convert_sites_to_vcf	[_draw_="c 7 -#000000 B 4 140.36 178.58 134.13 171 124.82 159.71 117.37 150.65 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 119.41 149.28 113.07 145.43 115.63 152.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 144.8 155.6 0 37 9 -ref_fasta ",
		label=ref_fasta,
		lp="144.8,157.5",
		pos="e,112.11,144.26 140.36,178.58 134.13,171 124.82,159.71 117.37,150.65"];
	make_report	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 141.3 80.5 141.3 99.5 219.3 99.5 219.3 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 180.3 87.5 0 62 11 -make_report ",
		height=0.27778,
		label=make_report,
		pos="180.3,90",
		rects="141.3,80.5,219.3,99.5",
		width=1.0833];
	ref_fasta -> make_report	[_draw_="c 7 -#000000 B 10 132.4 178.61 126.57 175.58 119.75 172.34 113.3 170 65.18 152.56 -25.21 164.53 7.3 125 23 105.92 87.7 97.38 133.36 \
93.68 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 133.35 96.14 140.14 93.16 132.97 91.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 25.8 133.1 0 37 9 -ref_fasta ",
		label=ref_fasta,
		lp="25.8,135",
		pos="e,141.65,93.042 132.4,178.61 126.57,175.58 119.75,172.34 113.3,170 65.181,152.56 -25.214,164.53 7.3,125 22.997,105.92 87.705,97.381 \
133.36,93.679"];
	maf_files -> convert_mafs_to_vcf	[_draw_="c 7 -#000000 B 4 214.78 178.58 216.87 171.45 219.94 161.02 222.51 152.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 224.82 153.12 224.44 145.72 220.12 151.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 229.3 155.6 0 16 3 -maf ",
		label=maf,
		lp="229.3,157.5",
		pos="e,224.87,144.26 214.78,178.58 216.87,171.45 219.94,161.02 222.51,152.27"];
	bam_files -> make_report	[_draw_="c 7 -#000000 B 7 283.47 178.7 289.14 166.12 297.48 141.93 287.3 125 275.05 104.62 250.17 95.94 227.48 92.44 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 228.01 90.04 220.75 91.57 227.38 94.9 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 311.3 133.1 0 40 9 -bam_files ",
		label=bam_files,
		lp="311.3,135",
		pos="e,219.25,91.374 283.47,178.7 289.14,166.12 297.48,141.93 287.3,125 275.05,104.62 250.17,95.94 227.48,92.441"];
	convert_mafs_to_vcf -> make_report	[_draw_="c 7 -#000000 B 4 218.24 125.71 211.74 119.76 202.83 111.61 195.28 104.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 197.27 103.2 190.45 100.29 193.96 106.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 230.8 110.6 0 47 12 -vcf_gz_files ",
		label=vcf_gz_files,
		lp="230.8,112.5",
		pos="e,189.33,99.265 218.24,125.71 211.74,119.76 202.83,111.61 195.28,104.7"];
	convert_sites_to_vcf -> make_report	[_draw_="c 7 -#000000 B 4 120.12 125.5 131.01 119.26 145.98 110.68 158.27 103.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 159.35 105.84 164.2 100.23 156.91 101.59 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 159.3 110.6 0 20 5 -sites ",
		label=sites,
		lp="159.3,112.5",
		pos="e,165.51,99.478 120.12,125.5 131.01,119.26 145.98,110.68 158.27,103.63"];
	make_report -> output_file	[_draw_="c 7 -#000000 B 4 180.3 80.71 180.3 75.59 180.3 68.85 180.3 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 182.75 62.78 180.3 55.78 177.85 62.78 ",
		pos="e,180.3,54.265 180.3,80.709 180.3,75.593 180.3,68.848 180.3,62.666"];
}