digraph workflow {
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		flagstats	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 872.5 72.5 872.5 91.5 931.5 91.5 931.5 72.5 ",
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		insert_size_metrics	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 592.5 72.5 592.5 91.5 703.5 91.5 703.5 72.5 ",
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	reference -> alignment_and_qc	[_draw_="c 7 -#000000 B 7 1277.74 178.56 1262.9 170.28 1238.69 158.16 1216 153 1172.85 143.19 1058.46 138.99 980.34 137.22 ",
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		label="scatter GATK HaplotypeCaller over intervals",
		pos="1385,10",
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	reference -> haplotype_caller	[_draw_="c 7 -#000000 B 7 1300.43 178.62 1321.87 157.31 1376.86 102.49 1378 100 1388.7 76.61 1388.47 46.14 1386.98 27.6 ",
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	bait_intervals -> alignment_and_qc	[_draw_="c 7 -#000000 B 7 662.93 178.61 672.17 170.49 687.41 158.62 703 153 724.73 145.17 777.72 140.89 823.57 138.58 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 823.65 141.03 830.52 138.24 823.41 136.13 ",
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	known_indels -> alignment_and_qc	[_draw_="c 7 -#000000 B 7 1058.11 178.67 1045.37 170.83 1025.09 159.37 1006 153 997.7 150.23 988.86 147.9 979.99 145.95 ",
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	intervals -> haplotype_caller	[_draw_="c 7 -#000000 B 7 1366.7 178.71 1379.93 166.69 1403.01 143 1412 117 1422.9 85.49 1406.15 47.34 1394.55 26.48 ",
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	mills -> alignment_and_qc	[_draw_="c 7 -#000000 B 7 1127.43 178.79 1117.2 170.57 1100.12 158.38 1083 153 1064.1 147.06 1020.19 142.85 980.36 140.11 ",
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	target_intervals -> alignment_and_qc	[_draw_="c 7 -#000000 B 7 1191.82 178.53 1174.61 170.47 1147.14 158.75 1122 153 1075.61 142.39 1022.44 138.07 980 136.44 ",
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		pos="e,971.65,136.15 1191.8,178.53 1174.6,170.47 1147.1,158.75 1122,153 1075.6,142.39 1022.4,138.07 980,136.44"];
	picard_metric_accumulation_level -> alignment_and_qc	[_draw_="c 7 -#000000 B 7 520.7 178.54 525.77 170.37 534.65 158.45 546 153 570.32 141.32 726.75 137.66 823.99 136.52 ",
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	readgroups -> alignment_and_qc	[_draw_="c 7 -#000000 B 7 741.81 178.74 748.94 170.72 760.9 158.92 774 153 789.45 146.02 806.94 141.68 823.92 139.03 ",
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	bams -> alignment_and_qc	[_draw_="c 7 -#000000 B 7 804.48 178.79 811.98 171.04 824.23 159.65 837 153 841.31 150.76 845.93 148.79 850.66 147.08 ",
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	omni_vcf -> alignment_and_qc	[_draw_="c 7 -#000000 B 7 855.41 178.53 857.06 171.02 860.42 160.17 867 153 868.4 151.47 869.96 150.07 871.63 148.78 ",
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	emit_reference_confidence -> haplotype_caller	[_draw_="c 7 -#000000 B 10 1464.54 178.9 1463.51 164.29 1460.3 132.78 1451 108 1436.27 68.75 1427.52 60.47 1401 28 1400.34 27.19 1399.64 \
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		lp="1509,112.5",
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	dbsnp -> alignment_and_qc	[_draw_="c 7 -#000000 B 4 910.35 178.58 908.97 171.52 906.95 161.24 905.24 152.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 907.66 152.15 903.91 145.75 902.85 153.09 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 920 155.6 0 26 5 -dbsnp ",
		label=dbsnp,
		lp="920,157.5",
		pos="e,903.62,144.26 910.35,178.58 908.97,171.52 906.95,161.24 905.24,152.55"];
	gvcf_gq_bands -> haplotype_caller	[_draw_="c 7 -#000000 B 7 1587.77 178.66 1586.92 163.11 1583.09 129.34 1566 108 1529.54 62.47 1465.77 35.52 1424.47 22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1425.39 19.72 1417.97 19.93 1423.9 24.38 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1601.5 110.6 0 61 13 -gvcf_gq_bands ",
		label=gvcf_gq_bands,
		lp="1601.5,112.5",
		pos="e,1416.5,19.469 1587.8,178.66 1586.9,163.11 1583.1,129.34 1566,108 1529.5,62.474 1465.8,35.522 1424.5,21.996"];
	bqsr_intervals -> alignment_and_qc	[_draw_="c 7 -#000000 B 7 971.21 178.76 961.66 171.6 947.21 161.14 934 153 931.44 151.42 928.72 149.84 925.99 148.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 927.49 146.34 920.17 145.15 925.15 150.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 976 155.6 0 58 14 -bqsr_intervals ",
		label=bqsr_intervals,
		lp="976,157.5",
		pos="e,918.84,144.43 971.21,178.76 961.66,171.6 947.21,161.14 934,153 931.44,151.42 928.72,149.84 925.99,148.31"];
	alignment_and_qc -> alignment_summary_metrics	[_draw_="c 7 -#000000 B 7 885.43 125.51 875.04 120.29 861.34 113.55 849 108 838.79 103.41 827.47 98.67 817.38 94.58 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 818.42 92.35 811.01 92.01 816.59 96.9 ",
		pos="e,809.61,91.444 885.43,125.51 875.04,120.29 861.34,113.55 849,108 838.79,103.41 827.47,98.674 817.38,94.578"];
	alignment_and_qc -> flagstats	[_draw_="c 7 -#000000 B 4 902 125.58 902 118.52 902 108.24 902 99.55 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 904.45 99.78 902 92.78 899.55 99.78 ",
		pos="e,902,91.265 902,125.58 902,118.52 902,108.24 902,99.547"];
	alignment_and_qc -> cram	[_draw_="c 7 -#000000 B 4 910.92 125.58 919.17 117.78 931.61 106.04 941.32 96.86 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 942.74 98.89 946.15 92.3 939.38 95.33 ",
		pos="e,947.25,91.265 910.92,125.58 919.17,117.78 931.61,106.04 941.32,96.86"];
	alignment_and_qc -> hs_metrics	[_draw_="c 7 -#000000 B 4 920.82 125.58 939.55 117.2 968.46 104.27 989.5 94.85 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 990.38 97.15 995.77 92.05 988.38 92.67 ",
		pos="e,997.15,91.434 920.82,125.58 939.55,117.2 968.46,104.27 989.5,94.853"];
	alignment_and_qc -> per_base_coverage_metrics	[_draw_="c 7 -#000000 B 7 832.09 132.45 675.16 128.7 298.8 118.08 173 100 160.9 98.26 147.88 95.77 135.94 93.22 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 136.71 90.88 129.35 91.79 135.66 95.67 ",
		pos="e,127.87,91.465 832.09,132.45 675.16,128.7 298.8,118.08 173,100 160.9,98.26 147.88,95.767 135.94,93.224"];
	alignment_and_qc -> per_target_coverage_metrics	[_draw_="c 7 -#000000 B 7 832.34 133.64 725.14 132.23 513.51 126.04 336 100 323.58 98.18 310.23 95.68 297.93 93.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 298.45 90.77 291.1 91.74 297.45 95.57 ",
		pos="e,289.62,91.427 832.34,133.64 725.14,132.23 513.51,126.04 336,100 323.58,98.179 310.23,95.684 297.93,93.166"];
	alignment_and_qc -> verify_bam_id_metrics	[_draw_="c 7 -#000000 B 7 832.2 132.09 746.27 128.93 596.08 120.73 469 100 458.96 98.36 448.23 95.98 438.32 93.52 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 439.09 91.18 431.7 91.82 437.87 95.93 ",
		pos="e,430.23,91.443 832.2,132.09 746.27,128.93 596.08,120.73 469,100 458.96,98.363 448.23,95.982 438.32,93.518"];
	alignment_and_qc -> verify_bam_id_depth	[_draw_="c 7 -#000000 B 10 837.45 125.53 795.02 120.12 738.26 113.17 688 108 645.85 103.67 634.75 107.24 593 100 583.72 98.39 573.83 96.07 \
564.66 93.66 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 565.35 91.31 557.95 91.83 564.06 96.03 ",
		pos="e,556.49,91.436 837.45,125.53 795.02,120.12 738.26,113.17 688,108 645.85,103.67 634.75,107.24 593,100 583.72,98.39 573.83,96.069 \
564.66,93.658"];
	alignment_and_qc -> insert_size_metrics	[_draw_="c 7 -#000000 B 10 871.41 125.58 849.46 119.83 819.11 112.47 792 108 755 101.89 744.86 106.92 708 100 699.54 98.41 690.55 96.17 682.17 \
93.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 682.9 91.5 675.5 91.91 681.54 96.2 ",
		pos="e,674.04,91.489 871.41,125.58 849.46,119.83 819.11,112.47 792,108 755,101.89 744.86,106.92 708,100 699.54,98.412 690.55,96.171 682.17,\
93.836"];
	alignment_and_qc -> mark_duplicates_metrics	[_draw_="c 7 -#000000 B 7 953.61 125.53 992.12 119.03 1045.97 109.58 1093 100 1102.89 97.99 1113.48 95.65 1123.47 93.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1123.95 95.78 1130.22 91.83 1122.85 91.01 ",
		pos="e,1131.7,91.486 953.61,125.53 992.12,119.03 1046,109.58 1093,100 1102.9,97.985 1113.5,95.655 1123.5,93.378"];
	extract_freemix	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1253.5 72.5 1253.5 91.5 1348.5 91.5 1348.5 72.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1301 79.5 0 79 15 -extract_freemix ",
		height=0.27778,
		label=extract_freemix,
		pos="1301,82",
		rects="1253.5,72.5,1348.5,91.5",
		width=1.3194];
	alignment_and_qc -> extract_freemix	[_draw_="c 7 -#000000 B 7 971.79 131.22 1041.73 127.47 1152.17 118.94 1246 100 1253.7 98.45 1261.85 96.24 1269.46 93.94 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1270.06 96.32 1276 91.88 1268.59 91.64 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1244 110.6 0 90 21 -verify_bam_id_metrics ",
		label=verify_bam_id_metrics,
		lp="1244,112.5",
		pos="e,1277.4,91.423 971.79,131.22 1041.7,127.47 1152.2,118.94 1246,100 1253.7,98.446 1261.9,96.245 1269.5,93.939"];
	alignment_and_qc -> haplotype_caller	[_draw_="c 7 -#000000 B 13 971.62 132.93 1066.33 131.12 1230.78 126.69 1290 117 1316.93 112.59 1330.52 120.08 1349 100 1365.88 81.66 1349.93 \
67.81 1360 45 1363 38.21 1367.53 31.48 1371.92 25.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1373.77 27.42 1376.32 20.46 1369.98 24.31 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1370.5 80.1 0 21 4 -cram ",
		label=cram,
		lp="1370.5,82",
		pos="e,1377.3,19.287 971.62,132.93 1066.3,131.12 1230.8,126.69 1290,117 1316.9,112.59 1330.5,120.08 1349,100 1365.9,81.656 1349.9,67.805 \
1360,45 1363,38.214 1367.5,31.477 1371.9,25.812"];
	extract_freemix -> haplotype_caller	[_draw_="c 7 -#000000 B 7 1285.81 72.58 1268.6 61.99 1244.58 43.34 1258 28 1259.83 25.91 1262.5 24.07 1265.84 22.45 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1266.55 24.8 1272.17 19.96 1264.76 20.24 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1305.5 30.6 0 95 22 -contamination_fraction ",
		label=contamination_fraction,
		lp="1305.5,32.5",
		pos="e,1273.6,19.407 1285.8,72.58 1268.6,61.99 1244.6,43.337 1258,28 1259.8,25.913 1262.5,24.071 1265.8,22.446"];
	haplotype_caller -> gvcf	[_draw_="c 7 -#000000 B 7 1269.08 14.69 1202 18.74 1125.37 27.22 1097 45 1089.52 49.69 1084.03 57.79 1080.29 65.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1078.19 63.82 1077.53 71.21 1082.65 65.84 ",
		pos="e,1076.9,72.584 1269.1,14.69 1202,18.736 1125.4,27.218 1097,45 1089.5,49.686 1084,57.792 1080.3,65.126"];
}