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		label=read_group_id,
		lp="1206,247.5",
		pos="e,974.79,225.47 1592.2,268.6 1583.7,265.25 1573.6,261.78 1564,260 1521.7,252.14 1217.7,266.02 1177,252 1170.7,249.83 1171.3,245.28 \
1165,243 1132.2,231.06 1053.3,226.85 983.27,225.61"];
	strand -> stringtie	[_draw_="c 7 -#000000 B 10 256.31 268.72 257.8 258.65 260 241.12 260 226 260 226 260 226 260 134 260 124.89 257.47 115.09 254.74 107.14 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 257.1 106.47 252.33 100.79 252.52 108.2 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 273.5 178.1 0 27 6 -strand ",
		label=strand,
		lp="273.5,180",
		pos="e,251.8,99.374 256.31,268.72 257.8,258.65 260,241.12 260,226 260,226 260,226 260,134 260,124.89 257.47,115.09 254.74,107.14"];
	strand -> kallisto	[_draw_="c 7 -#000000 B 7 266.81 268.64 271.64 265.54 277.4 262.24 283 260 463.54 187.75 694.17 153.91 796.29 141.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 796.42 144.12 803.09 140.86 795.85 139.25 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 494.5 200.6 0 27 6 -strand ",
		label=strand,
		lp="494.5,202.5",
		pos="e,804.59,140.69 266.81,268.64 271.64,265.54 277.4,262.24 283,260 463.54,187.75 694.17,153.91 796.29,141.67"];
	generate_qc_metrics	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 1020 80.5 1020 99.5 1154 99.5 1154 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 1087 87.5 0 118 23 -Picard: RNA Seq Metrics ",
		height=0.27778,
		label="Picard: RNA Seq Metrics",
		pos="1087,90",
		rects="1020,80.5,1154,99.5",
		width=1.8611];
	strand -> generate_qc_metrics	[_draw_="c 7 -#000000 B 16 266.14 268.65 271.06 265.4 277.07 261.98 283 260 330.66 244.07 682.88 218.55 733 215 818.19 208.97 840.51 219.5 \
925 207 954.96 202.57 964.81 205.22 991 190 1028.38 168.28 1060.79 127.94 1076.65 106.06 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1078.44 107.76 1080.5 100.63 1074.45 104.92 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1031.5 178.1 0 27 6 -strand ",
		label=strand,
		lp="1031.5,180",
		pos="e,1081.4,99.397 266.14,268.65 271.06,265.4 277.07,261.98 283,260 330.66,244.07 682.88,218.55 733,215 818.19,208.97 840.51,219.5 \
925,207 954.96,202.57 964.81,205.22 991,190 1028.4,168.28 1060.8,127.94 1076.6,106.06"];
	strand -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 13 265.81 268.62 270.77 265.28 276.89 261.8 283 260 313.81 250.92 542.88 265.56 572 252 576.85 249.74 575.19 245.34 \
580 243 587.03 239.58 658.55 235.22 726.88 231.77 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 726.81 234.23 733.68 231.43 726.57 229.34 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 593.5 245.6 0 27 6 -strand ",
		label=strand,
		lp="593.5,247.5",
		pos="e,735.19,231.36 265.81,268.62 270.77,265.28 276.89,261.8 283,260 313.81,250.92 542.88,265.56 572,252 576.85,249.74 575.19,245.34 \
580,243 587.03,239.58 658.55,235.22 726.88,231.77"];
	refFlat -> generate_qc_metrics	[_draw_="c 7 -#000000 B 13 1951.16 268.55 1946.49 265.65 1941.1 262.51 1936 260 1898.38 241.49 1848 267.93 1848 226 1848 226 1848 226 1848 \
134 1848 99.89 1354.35 92.83 1162.23 91.38 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1162.4 88.93 1155.38 91.33 1162.36 93.83 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1861.5 178.1 0 27 7 -refFlat ",
		label=refFlat,
		lp="1861.5,180",
		pos="e,1153.9,91.315 1951.2,268.55 1946.5,265.65 1941.1,262.51 1936,260 1898.4,241.49 1848,267.93 1848,226 1848,226 1848,226 1848,134 \
1848,99.895 1354.4,92.833 1162.2,91.377"];
	ribosomal_intervals -> generate_qc_metrics	[_draw_="c 7 -#000000 B 13 1851.68 268.57 1841.49 265.61 1829.77 262.42 1819 260 1774.37 249.97 1616 271.74 1616 226 1616 226 1616 226 1616 \
134 1616 111.5 1308.1 98.31 1162.1 93.31 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1162.59 90.88 1155.51 93.09 1162.42 95.77 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1656 178.1 0 80 19 -ribosomal_intervals ",
		label=ribosomal_intervals,
		lp="1656,180",
		pos="e,1154,93.037 1851.7,268.57 1841.5,265.61 1829.8,262.42 1819,260 1774.4,249.97 1616,271.74 1616,226 1616,226 1616,226 1616,134 1616,\
111.5 1308.1,98.306 1162.1,93.312"];
	transcript_to_gene	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 872.5 80.5 872.5 99.5 1015.5 99.5 1015.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 944 87.5 0 127 26 -Kallisto: TranscriptToGene ",
		height=0.27778,
		label="Kallisto: TranscriptToGene",
		pos="944,90",
		rects="872.5,80.5,1015.5,99.5",
		width=1.9861];
	gene_transcript_lookup_table -> transcript_to_gene	[_draw_="c 7 -#000000 B 10 1699.07 268.55 1677.51 263.81 1650.24 257.71 1626 252 1367.48 191.06 1306.08 161.87 1046 108 1033.74 105.46 1020.6 \
103.04 1007.95 100.87 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1008.53 98.48 1001.22 99.73 1007.72 103.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1442.5 178.1 0 121 28 -gene_transcript_lookup_table ",
		label=gene_transcript_lookup_table,
		lp="1442.5,180",
		pos="e,999.73,99.479 1699.1,268.55 1677.5,263.81 1650.2,257.71 1626,252 1367.5,191.06 1306.1,161.87 1046,108 1033.7,105.46 1020.6,103.04 \
1008,100.87"];
	sample_name -> stringtie	[_draw_="c 7 -#000000 B 10 64.19 268.69 69.82 258.88 78 241.87 78 226 78 226 78 226 78 134 78 106.95 159.93 96.73 210.03 93.01 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 210.07 95.47 216.88 92.54 209.73 90.58 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 107 178.1 0 58 11 -sample_name ",
		label=sample_name,
		lp="107,180",
		pos="e,218.39,92.433 64.192,268.69 69.817,258.88 78,241.87 78,226 78,226 78,226 78,134 78,106.95 159.93,96.733 210.03,93.015"];
	trimming_min_readlength -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 802.23 268.51 814.29 264.79 826.8 259.5 837 252 839.23 250.36 842.49 245.98 845.63 241.28 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 847.49 242.92 849.19 235.7 843.36 240.28 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 876 245.6 0 64 14 -min_readlength ",
		label=min_readlength,
		lp="876,247.5",
		pos="e,850,234.43 802.23,268.51 814.29,264.79 826.8,259.5 837,252 839.23,250.36 842.49,245.98 845.63,241.28"];
	trimming_adapter_min_overlap -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 918.25 268.65 918.01 261.03 916.46 249.91 910 243 908.57 241.47 907 240.07 905.33 238.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 906.96 236.93 899.72 235.29 904.36 241.08 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 958 245.6 0 86 19 -adapter_min_overlap ",
		label=adapter_min_overlap,
		lp="958,247.5",
		pos="e,898.44,234.49 918.25,268.65 918.01,261.03 916.46,249.91 910,243 908.57,241.47 907,240.07 905.33,238.8"];
	reference_index -> bam_to_trimmed_fastq_and_hisat_alignments	[_draw_="c 7 -#000000 B 7 1042.08 268.5 1027.11 258.69 1004.2 243.79 1002 243 994.65 240.38 986.98 238.14 979.16 236.23 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 980.14 233.94 972.77 234.76 979.04 238.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1049 245.6 0 66 15 -reference_index ",
		label=reference_index,
		lp="1049,247.5",
		pos="e,971.29,234.42 1042.1,268.5 1027.1,258.69 1004.2,243.79 1002,243 994.65,240.38 986.98,238.14 979.16,236.23"];
	stringtie -> stringtie_gene_expression_tsv	[_draw_="c 7 -#000000 B 4 271.51 80.5 289.85 73.88 315.49 64.61 335.58 57.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 336.36 59.68 342.11 54.99 334.7 55.07 ",
		pos="e,343.54,54.478 271.51,80.505 289.85,73.879 315.49,64.614 335.58,57.353"];
	stringtie -> stringtie_transcript_gtf	[_draw_="c 7 -#000000 B 4 241.83 80.71 237.67 75.12 232.06 67.58 227.13 60.96 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 229.2 59.63 223.05 55.48 225.27 62.56 ",
		pos="e,222.15,54.265 241.83,80.709 237.67,75.117 232.06,67.579 227.13,60.957"];
	transcript_to_gene -> gene_abundance	[_draw_="c 7 -#000000 B 4 947.47 80.71 949.71 75.36 952.7 68.22 955.38 61.81 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 957.51 63.06 957.96 55.66 952.99 61.17 ",
		pos="e,958.54,54.265 947.47,80.709 949.71,75.355 952.7,68.217 955.38,61.807"];
	kallisto -> transcript_abundance_tsv	[_draw_="c 7 -#000000 B 4 838.26 125.56 818.81 110.28 777.6 77.9 754.19 59.51 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 755.75 57.62 748.73 55.22 752.72 61.47 ",
		pos="e,747.54,54.284 838.26,125.56 818.81,110.28 777.6,77.901 754.19,59.509"];
	kallisto -> fusion_evidence	[_draw_="c 7 -#000000 B 4 850.05 125.56 851.86 111.14 855.57 81.48 857.91 62.73 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 860.34 63.04 858.78 55.79 855.48 62.43 ",
		pos="e,858.96,54.284 850.05,125.56 851.86,111.14 855.57,81.476 857.91,62.727"];
	kallisto -> transcript_abundance_h5	[_draw_="c 7 -#000000 B 4 824.36 125.56 777.73 109.6 676.61 74.97 624.49 57.13 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 625.42 54.85 618 54.9 623.83 59.49 ",
		pos="e,616.57,54.412 824.36,125.56 777.73,109.6 676.61,74.97 624.49,57.126"];
	kallisto -> transcript_to_gene	[_draw_="c 7 -#000000 B 7 862.68 125.65 871.89 120.22 884.43 113.2 896 108 900.39 106.02 905.08 104.12 909.75 102.35 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 910.38 104.73 916.11 100.02 908.7 100.12 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 935.5 110.6 0 79 19 -transcript_table_h5 ",
		label=transcript_table_h5,
		lp="935.5,112.5",
		pos="e,917.53,99.495 862.68,125.65 871.89,120.22 884.43,113.2 896,108 900.39,106.02 905.08,104.12 909.75,102.35"];
	generate_qc_metrics -> metrics	[_draw_="c 7 -#000000 B 4 1087 80.71 1087 75.59 1087 68.85 1087 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1089.45 62.78 1087 55.78 1084.55 62.78 ",
		pos="e,1087,54.265 1087,80.709 1087,75.593 1087,68.848 1087,62.666"];
	generate_qc_metrics -> chart	[_draw_="c 7 -#000000 B 4 1077.17 80.71 1070.11 74.76 1060.44 66.61 1052.25 59.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1053.89 57.88 1046.96 55.24 1050.73 61.63 ",
		pos="e,1045.8,54.265 1077.2,80.709 1070.1,74.76 1060.4,66.609 1052.2,59.701"];
	mark_dup	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 402 125.5 402 144.5 540 144.5 540 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 471 132.5 0 122 24 -Mark duplicates and Sort ",
		height=0.27778,
		label="Mark duplicates and Sort",
		pos="471,135",
		rects="402,125.5,540,144.5",
		width=1.9167];
	mark_dup -> final_bam	[_draw_="c 7 -#000000 B 4 472.44 125.56 474.91 111.07 480 81.21 483.19 62.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 485.57 63.09 484.33 55.78 480.74 62.26 ",
		pos="e,484.59,54.284 472.44,125.56 474.91,111.07 480,81.205 483.19,62.471"];
	mark_dup -> stringtie	[_draw_="c 7 -#000000 B 4 426.94 125.5 385.7 117.55 324.75 105.8 285.7 98.27 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 286.54 95.94 279.21 97.02 285.62 100.75 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 388.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="388.5,112.5",
		pos="e,277.72,96.731 426.94,125.5 385.7,117.55 324.75,105.8 285.7,98.27"];
	bam_to_trimmed_fastq_and_hisat_alignments -> kallisto	[_draw_="c 7 -#000000 B 7 853.83 215.63 852.91 208.76 851.68 198.77 851 190 850.04 177.56 849.54 163.46 849.28 152.8 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 851.73 152.89 849.13 145.94 846.83 152.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 864 178.1 0 26 6 -fastqs ",
		label=fastqs,
		lp="864,180",
		pos="e,849.1,144.43 853.83,215.63 852.91,208.76 851.68,198.77 851,190 850.04,177.56 849.54,163.46 849.28,152.8"];
	merge	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 879 170.5 879 189.5 989 189.5 989 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 934 177.5 0 94 15 -Sambamba: merge ",
		height=0.27778,
		label="Sambamba: merge",
		pos="934,180",
		rects="879,170.5,989,189.5",
		width=1.5278];
	bam_to_trimmed_fastq_and_hisat_alignments -> merge	[_draw_="c 7 -#000000 B 4 870.61 215.5 882.19 209.2 898.15 200.51 911.16 193.43 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 912.12 195.7 917.1 190.2 909.78 191.4 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 912.5 200.6 0 23 4 -bams ",
		label=bams,
		lp="912.5,202.5",
		pos="e,918.42,189.48 870.61,215.5 882.19,209.2 898.15,200.51 911.16,193.43"];
	merge -> mark_dup	[_draw_="c 7 -#000000 B 7 879.37 170.53 877.9 170.35 876.44 170.17 875 170 761.47 156.58 629.37 146.5 547.97 140.93 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 548.43 138.5 541.28 140.47 548.09 143.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 806.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="806.5,157.5",
		pos="e,539.77,140.37 879.37,170.53 877.9,170.35 876.44,170.17 875,170 761.47,156.58 629.37,146.5 547.97,140.93"];
	index_bam	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 904 125.5 904 144.5 996 144.5 996 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 950 132.5 0 76 14 -samtools index ",
		height=0.27778,
		label="samtools index",
		pos="950,135",
		rects="904,125.5,996,144.5",
		width=1.2778];
	merge -> index_bam	[_draw_="c 7 -#000000 B 4 937.08 170.71 939.03 165.47 941.62 158.53 943.96 152.24 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 946.25 153.1 946.4 145.68 941.66 151.39 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 952.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="952.5,157.5",
		pos="e,946.92,144.27 937.08,170.71 939.03,165.47 941.62,158.53 943.96,152.24"];
	index_bam -> generate_qc_metrics	[_draw_="c 7 -#000000 B 4 977.07 125.5 998.55 118.76 1028.75 109.28 1052.06 101.97 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 1052.6 104.36 1058.55 99.93 1051.13 99.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 1039.5 110.6 0 19 3 -bam ",
		label=bam,
		lp="1039.5,112.5",
		pos="e,1060,99.478 977.07,125.5 998.55,118.76 1028.7,109.28 1052.1,101.97"];
	default1	[_draw_="c 7 -#000000 C 7 -#d5aefc P 4 415.5 170.5 415.5 189.5 492.5 189.5 492.5 170.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 454 177.5 0 61 12 -\"coordinate\" ",
		fillcolor="#D5AEFC",
		height=0.27778,
		label="\"coordinate\"",
		pos="454,180",
		rects="415.5,170.5,492.5,189.5",
		width=1.0694];
	default1 -> mark_dup	[_draw_="c 7 -#000000 B 7 454.24 170.51 454.65 165.29 455.64 158.55 458 153 458.2 152.53 458.42 152.06 458.65 151.6 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 460.68 152.96 462.39 145.74 456.55 150.32 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 491.5 155.6 0 67 16 -input_sort_order ",
		label=input_sort_order,
		lp="491.5,157.5",
		pos="e,463.21,144.47 454.24,170.51 454.65,165.29 455.64,158.55 458,153 458.2,152.53 458.42,152.06 458.65,151.6"];
}