digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 854 233 854 0 ",
		bb="0,0,854,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
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	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
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	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
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	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 170 8 225 846 225 846 170 ",
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			bb="8,170,846,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
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		minimum_sv_size	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 91.5 178.5 91.5 197.5 196.5 197.5 196.5 178.5 ",
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			label=minimum_sv_size,
			pos="144,188",
			rects="91.5,178.5,196.5,197.5",
			width=1.4583];
		estimate_sv_distance	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 552.5 178.5 552.5 197.5 675.5 197.5 675.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 614 185.5 0 107 20 -estimate_sv_distance ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=estimate_sv_distance,
			pos="614,188",
			rects="552.5,178.5,675.5,197.5",
			width=1.7083];
		cohort_name	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 468 178.5 468 197.5 548 197.5 548 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 508 185.5 0 64 11 -cohort_name ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=cohort_name,
			pos="508,188",
			rects="468,178.5,548,197.5",
			width=1.1111];
		vcfs	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 285.5 178.5 285.5 197.5 322.5 197.5 322.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 304 185.5 0 21 4 -vcfs ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=vcfs,
			pos="304,188",
			rects="285.5,178.5,322.5,197.5",
			width=0.51389];
		minimum_sv_calls	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 680 178.5 680 197.5 788 197.5 788 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 734 185.5 0 92 16 -minimum_sv_calls ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=minimum_sv_calls,
			pos="734,188",
			rects="680,178.5,788,197.5",
			width=1.5];
		same_type	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16.5 178.5 16.5 197.5 87.5 197.5 87.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 52 185.5 0 55 9 -same_type ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=same_type,
			pos="52,188",
			rects="16.5,178.5,87.5,197.5",
			width=0.98611];
		same_strand	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 201 178.5 201 197.5 281 197.5 281 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 241 185.5 0 64 11 -same_strand ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=same_strand,
			pos="241,188",
			rects="201,178.5,281,197.5",
			width=1.1111];
		sv_db	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 792.5 178.5 792.5 197.5 837.5 197.5 837.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 815 185.5 0 29 5 -sv_db ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=sv_db,
			pos="815,188",
			rects="792.5,178.5,837.5,197.5",
			width=0.625];
		max_distance_to_merge	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 326.5 178.5 326.5 197.5 463.5 197.5 463.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 395 185.5 0 121 21 -max_distance_to_merge ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=max_distance_to_merge,
			pos="395,188",
			rects="326.5,178.5,463.5,197.5",
			width=1.9028];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 444 8 444 63 590 63 590 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 498 15 0 92 16 -Workflow Outputs ",
			bb="444,8,590,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="498,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		merged_annotated_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 452.5 35.5 452.5 54.5 581.5 54.5 581.5 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 517 42.5 0 113 20 -merged_annotated_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=merged_annotated_vcf,
			pos="517,45",
			rects="452.5,35.5,581.5,54.5",
			width=1.7917];
	}
	merge_vcfs	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 258 125.5 258 144.5 436 144.5 436 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 347 132.5 0 162 30 -Run SURVIVOR to merge SV calls ",
		height=0.27778,
		label="Run SURVIVOR to merge SV calls",
		pos="347,135",
		rects="258,125.5,436,144.5",
		width=2.4722];
	minimum_sv_size -> merge_vcfs	[_draw_="c 7 -#000000 B 7 150.78 178.66 157.88 170.58 169.82 158.73 183 153 195.66 147.49 222.07 143.72 250.07 141.16 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 250.13 143.62 256.89 140.57 249.7 138.74 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 218.5 155.6 0 71 15 -minimum_sv_size ",
		label=minimum_sv_size,
		lp="218.5,157.5",
		pos="e,258.4,140.44 150.78,178.66 157.88,170.58 169.82,158.73 183,153 195.66,147.49 222.07,143.72 250.07,141.16"];
	estimate_sv_distance -> merge_vcfs	[_draw_="c 7 -#000000 B 7 593.7 178.58 573.77 170.67 542.31 159.17 514 153 491.68 148.14 467.38 144.66 444.39 142.17 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 444.71 139.74 437.5 141.46 444.21 144.61 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 588 155.6 0 88 20 -estimate_sv_distance ",
		label=estimate_sv_distance,
		lp="588,157.5",
		pos="e,435.99,141.3 593.7,178.58 573.77,170.67 542.31,159.17 514,153 491.68,148.14 467.38,144.66 444.39,142.17"];
	cohort_name -> merge_vcfs	[_draw_="c 7 -#000000 B 10 489.9 178.69 480.48 174.13 468.89 168.17 459 162 453.34 158.47 453.12 155.63 447 153 441.26 150.53 435.18 148.42 \
428.98 146.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 429.92 144.33 422.53 144.88 428.65 149.06 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 486 155.6 0 54 11 -cohort_name ",
		label=cohort_name,
		lp="486,157.5",
		pos="e,421.07,144.49 489.9,178.69 480.48,174.13 468.89,168.17 459,162 453.34,158.47 453.12,155.63 447,153 441.26,150.53 435.18,148.42 \
428.98,146.61"];
	add_population_frequency	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 407.5 80.5 407.5 99.5 626.5 99.5 626.5 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 517 87.5 0 203 42 -add population allele frequencies to a vcf ",
		height=0.27778,
		label="add population allele frequencies to a vcf",
		pos="517,90",
		rects="407.5,80.5,626.5,99.5",
		width=3.0417];
	cohort_name -> add_population_frequency	[_draw_="c 7 -#000000 B 4 508.77 178.82 510.24 163.09 513.49 128.4 515.44 107.63 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 517.85 108.14 516.07 100.94 512.97 107.69 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 540 133.1 0 54 11 -cohort_name ",
		label=cohort_name,
		lp="540,135",
		pos="e,516.21,99.438 508.77,178.82 510.24,163.09 513.49,128.4 515.44,107.63"];
	vcfs -> merge_vcfs	[_draw_="c 7 -#000000 B 7 308.09 178.61 311.86 171.35 317.94 160.84 325 153 326.07 151.82 327.22 150.66 328.43 149.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 329.74 151.63 333.53 145.25 326.59 147.88 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 333.5 155.6 0 17 4 -vcfs ",
		label=vcfs,
		lp="333.5,157.5",
		pos="e,334.68,144.28 308.09,178.61 311.86,171.35 317.94,160.84 325,153 326.07,151.82 327.22,150.66 328.43,149.53"];
	minimum_sv_calls -> merge_vcfs	[_draw_="c 7 -#000000 B 7 714.3 178.63 694.25 170.52 662.06 158.65 633 153 628.29 152.08 525.16 146.09 444.09 141.47 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 444.46 139.04 437.33 141.09 444.18 143.93 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 702.5 155.6 0 73 16 -minimum_sv_calls ",
		label=minimum_sv_calls,
		lp="702.5,157.5",
		pos="e,435.82,141 714.3,178.63 694.25,170.52 662.06,158.65 633,153 628.29,152.08 525.16,146.09 444.09,141.47"];
	same_type -> merge_vcfs	[_draw_="c 7 -#000000 B 7 65.34 178.62 79 170.51 101.13 158.64 122 153 145.78 146.58 200.49 142.36 250 139.74 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 249.84 142.2 256.7 139.39 249.59 137.3 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 144.5 155.6 0 45 9 -same_type ",
		label=same_type,
		lp="144.5,157.5",
		pos="e,258.21,139.31 65.344,178.62 79.004,170.51 101.13,158.64 122,153 145.78,146.58 200.49,142.36 250,139.74"];
	same_strand -> merge_vcfs	[_draw_="c 7 -#000000 B 7 244.42 178.62 248.07 170.74 254.64 159.26 264 153 266.96 151.02 270.1 149.27 273.36 147.71 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 274.27 149.99 279.77 145.01 272.36 145.47 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 290.5 155.6 0 53 11 -same_strand ",
		label=same_strand,
		lp="290.5,157.5",
		pos="e,281.16,144.42 244.42,178.62 248.07,170.74 254.64,159.26 264,153 266.96,151.02 270.1,149.27 273.36,147.71"];
	sv_db -> add_population_frequency	[_draw_="c 7 -#000000 B 10 803.45 178.58 799.07 175.62 793.94 172.42 789 170 768.31 159.84 762 159.87 740 153 676.99 133.33 603.02 113.37 \
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		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 558.92 99.28 551.53 99.88 557.68 104.02 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 725 133.1 0 24 5 -sv_db ",
		label=sv_db,
		lp="725,135",
		pos="e,550.06,99.498 803.45,178.58 799.07,175.62 793.94,172.42 789,170 768.31,159.84 762,159.87 740,153 676.99,133.33 603.02,113.37 558.1,\
101.6"];
	max_distance_to_merge -> merge_vcfs	[_draw_="c 7 -#000000 B 7 371.45 178.52 363.79 174.63 355.99 169.23 351 162 349.13 159.28 347.99 156.03 347.33 152.76 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 349.78 152.64 346.64 145.92 344.91 153.13 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 400.5 155.6 0 99 21 -max_distance_to_merge ",
		label=max_distance_to_merge,
		lp="400.5,157.5",
		pos="e,346.49,144.41 371.45,178.52 363.79,174.63 355.99,169.23 351,162 349.13,159.28 347.99,156.03 347.33,152.76"];
	merge_vcfs -> add_population_frequency	[_draw_="c 7 -#000000 B 4 380.59 125.5 407.83 118.61 446.36 108.87 475.52 101.49 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 475.83 103.94 482.02 99.85 474.63 99.19 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 453.5 110.6 0 13 3 -vcf ",
		label=vcf,
		lp="453.5,112.5",
		pos="e,483.48,99.478 380.59,125.5 407.83,118.61 446.36,108.87 475.52,101.49"];
	add_population_frequency -> merged_annotated_vcf	[_draw_="c 7 -#000000 B 4 517 80.71 517 75.59 517 68.85 517 62.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 519.45 62.78 517 55.78 514.55 62.78 ",
		pos="e,517,54.265 517,80.709 517,75.593 517,68.848 517,62.666"];
}