digraph workflow {
	graph [_draw_="c 9 -#fffffe00 C 7 -#eeeeee P 4 0 0 0 233 563 233 563 0 ",
		bb="0,0,563,233",
		bgcolor="#eeeeee",
		clusterrank=local,
		color=black,
		dpi=96,
		fontsize=10,
		labeljust=left,
		nodesep=0.05,
		ranksep=0.22,
		xdotversion=1.7
	];
	node [color=black,
		fillcolor=lightgoldenrodyellow,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=10,
		height=0,
		label="\N",
		shape=record,
		style=filled,
		width=0
	];
	edge [arrowsize=0.7,
		color=black,
		fontcolor=black,
		fontname=Helvetica,
		fontsize=8
	];
	subgraph cluster_inputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 8 170 8 225 555 225 555 170 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 58 213 0 84 15 -Workflow Inputs ",
			bb="8,170,555,225",
			label="Workflow Inputs",
			lheight=0.15,
			lp="58,215.5",
			lwidth=1.17,
			rank=same,
			style=dashed
		];
		dbsnp_vcf	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 16 178.5 16 197.5 82 197.5 82 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 49 185.5 0 50 9 -dbsnp_vcf ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=dbsnp_vcf,
			pos="49,188",
			rects="16,178.5,82,197.5",
			width=0.91667];
		reference	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 86.5 178.5 86.5 197.5 149.5 197.5 149.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 118 185.5 0 47 9 -reference ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=reference,
			pos="118,188",
			rects="86.5,178.5,149.5,197.5",
			width=0.875];
		known_indels	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 343.5 178.5 343.5 197.5 426.5 197.5 426.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 385 185.5 0 67 12 -known_indels ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=known_indels,
			pos="385,188",
			rects="343.5,178.5,426.5,197.5",
			width=1.1528];
		mills	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 430.5 178.5 430.5 197.5 471.5 197.5 471.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 451 185.5 0 25 5 -mills ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mills,
			pos="451,188",
			rects="430.5,178.5,471.5,197.5",
			width=0.56944];
		downsample_probability	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 153.5 178.5 153.5 197.5 290.5 197.5 290.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 222 185.5 0 121 22 -downsample_probability ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=downsample_probability,
			pos="222,188",
			rects="153.5,178.5,290.5,197.5",
			width=1.9028];
		readgroups	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 475.5 178.5 475.5 197.5 546.5 197.5 546.5 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 511 185.5 0 55 10 -readgroups ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=readgroups,
			pos="511,188",
			rects="475.5,178.5,546.5,197.5",
			width=0.98611];
		bams	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 295 178.5 295 197.5 339 197.5 339 178.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 317 185.5 0 28 4 -bams ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bams,
			pos="317,188",
			rects="295,178.5,339,197.5",
			width=0.61111];
	}
	subgraph cluster_outputs {
		graph [_draw_="S 6 -dashed c 7 -#000000 C 7 -#eeeeee P 4 249 8 249 63 467 63 467 8 ",
			_ldraw_="F 10 11 -Times-Roman c 7 -#000000 T 303 15 0 92 16 -Workflow Outputs ",
			bb="249,8,467,63",
			label="Workflow Outputs",
			labelloc=b,
			lheight=0.15,
			lp="303,17.5",
			lwidth=1.28,
			rank=same,
			style=dashed
		];
		bam	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 257 35.5 257 54.5 295 54.5 295 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 276 42.5 0 22 3 -bam ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=bam,
			pos="276,45",
			rects="257,35.5,295,54.5",
			width=0.52778];
		mark_duplicates_metrics_file	[_draw_="c 7 -#000000 C 7 -#94ddf4 P 4 299 35.5 299 54.5 459 54.5 459 35.5 ",
			_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 379 42.5 0 144 28 -mark_duplicates_metrics_file ",
			fillcolor="#94DDF4",
			height=0.27778,
			label=mark_duplicates_metrics_file,
			pos="379,45",
			rects="299,35.5,459,54.5",
			width=2.2222];
	}
	align_workflow	[_draw_="c 7 -#000000 C 7 -#f3cea1 P 4 260 80.5 260 99.5 394 99.5 394 80.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 327 87.5 0 118 21 -Unaligned BAM to BQSR ",
		fillcolor="#F3CEA1",
		height=0.27778,
		label="Unaligned BAM to BQSR",
		pos="327,90",
		rects="260,80.5,394,99.5",
		width=1.8611];
	dbsnp_vcf -> align_workflow	[_draw_="c 7 -#000000 B 7 51.31 178.74 55.5 165.31 65.66 138.87 84 125 109.81 105.48 190.57 97.15 251.97 93.61 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 251.75 96.08 258.6 93.24 251.48 91.18 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 105 133.1 0 42 9 -dbsnp_vcf ",
		label=dbsnp_vcf,
		lp="105,135",
		pos="e,260.12,93.161 51.307,178.74 55.496,165.31 65.664,138.87 84,125 109.81,105.48 190.57,97.153 251.97,93.61"];
	reference -> align_workflow	[_draw_="c 7 -#000000 B 7 118.41 178.72 119.54 165.26 123.82 138.76 140 125 156.92 110.61 207.75 101.95 252.16 96.98 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 252.16 99.44 258.86 96.25 251.64 94.57 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 160 133.1 0 40 9 -reference ",
		label=reference,
		lp="160,135",
		pos="e,260.36,96.09 118.41,178.72 119.54,165.26 123.82,138.76 140,125 156.92,110.61 207.75,101.95 252.16,96.977"];
	downsample	[_draw_="c 7 -#000000 C 7 -#fafad2 P 4 181.5 125.5 181.5 144.5 336.5 144.5 336.5 125.5 ",
		_ldraw_="F 10 9 -Helvetica c 7 -#000000 T 259 132.5 0 139 24 -downsample unaligned BAM ",
		height=0.27778,
		label="downsample unaligned BAM",
		pos="259,135",
		rects="181.5,125.5,336.5,144.5",
		width=2.1528];
	reference -> downsample	[_draw_="c 7 -#000000 B 10 134.58 178.53 140.35 175.7 146.91 172.6 153 170 173.05 161.45 178.28 159.75 199 153 205.58 150.85 212.63 148.72 \
219.48 146.72 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 219.9 149.15 225.95 144.87 218.55 144.44 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 219 155.6 0 40 9 -reference ",
		label=reference,
		lp="219,157.5",
		pos="e,227.41,144.45 134.58,178.53 140.35,175.7 146.91,172.6 153,170 173.05,161.45 178.28,159.75 199,153 205.58,150.85 212.63,148.72 \
219.48,146.72"];
	known_indels -> align_workflow	[_draw_="c 7 -#000000 B 4 380.05 178.82 370.39 162.81 348.84 127.15 336.38 106.53 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 338.6 105.46 332.88 100.73 334.4 107.99 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 386 133.1 0 56 12 -known_indels ",
		label=known_indels,
		lp="386,135",
		pos="e,332.1,99.438 380.05,178.82 370.39,162.81 348.84,127.15 336.38,106.53"];
	mills -> align_workflow	[_draw_="c 7 -#000000 B 7 448.19 178.57 443.39 165.39 432.42 139.87 415 125 402.91 114.68 387.35 107.3 372.68 102.11 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 373.5 99.8 366.08 99.93 371.95 104.45 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 440.5 133.1 0 19 5 -mills ",
		label=mills,
		lp="440.5,135",
		pos="e,364.64,99.45 448.19,178.57 443.39,165.39 432.42,139.87 415,125 402.91,114.68 387.35,107.3 372.68,102.11"];
	downsample_probability -> downsample	[_draw_="c 7 -#000000 B 4 228.11 178.58 233.55 171.08 241.64 159.93 248.18 150.92 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 249.99 152.59 252.12 145.49 246.02 149.72 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 267 155.6 0 44 11 -probability ",
		label=probability,
		lp="267,157.5",
		pos="e,253,144.26 228.11,178.58 233.55,171.08 241.64,159.93 248.18,150.92"];
	readgroups -> align_workflow	[_draw_="c 7 -#000000 B 7 504.97 178.53 495.12 165.29 474.33 139.68 451 125 433.48 113.97 412.39 106.48 392.6 101.39 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 393.37 99.06 385.98 99.79 392.21 103.82 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 499 133.1 0 48 10 -readgroups ",
		label=readgroups,
		lp="499,135",
		pos="e,384.51,99.429 504.97,178.53 495.12,165.29 474.33,139.68 451,125 433.48,113.97 412.39,106.48 392.6,101.39"];
	bams -> downsample	[_draw_="c 7 -#000000 B 7 311.78 178.67 306.84 171.27 298.87 160.48 290 153 288.2 151.48 286.24 150.03 284.21 148.67 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 285.71 146.72 278.46 145.17 283.16 150.9 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 307.5 155.6 0 19 3 -bam ",
		label=bam,
		lp="307.5,157.5",
		pos="e,277.16,144.39 311.78,178.67 306.84,171.27 298.87,160.48 290,153 288.2,151.48 286.24,150.03 284.21,148.67"];
	align_workflow -> bam	[_draw_="c 7 -#000000 B 4 317.17 80.71 310.11 74.76 300.44 66.61 292.25 59.7 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 293.89 57.88 286.96 55.24 290.73 61.63 ",
		pos="e,285.8,54.265 317.17,80.709 310.11,74.76 300.44,66.609 292.25,59.701"];
	align_workflow -> mark_duplicates_metrics_file	[_draw_="c 7 -#000000 B 4 337.27 80.5 344.4 74.62 354.04 66.64 362.26 59.84 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 363.75 61.79 367.58 55.44 360.63 58.02 ",
		pos="e,368.75,54.478 337.27,80.505 344.4,74.615 354.04,66.64 362.26,59.841"];
	downsample -> align_workflow	[_draw_="c 7 -#000000 B 4 272.43 125.5 282.21 119.32 295.63 110.84 306.71 103.83 ",
		_hdraw_="S 5 -solid c 7 -#000000 C 7 -#000000 P 3 307.71 106.1 312.31 100.29 305.09 101.96 ",
		_ldraw_="F 8 9 -Helvetica c 7 -#000000 T 310.5 110.6 0 23 4 -bams ",
		label=bams,
		lp="310.5,112.5",
		pos="e,313.59,99.478 272.43,125.5 282.21,119.32 295.63,110.84 306.71,103.83"];
}